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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4103455..4105320+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108780-T1 ID=ATCC64974_108780-T1|Name=ATCC64974_108780-T1|organism=Aspergillus niger N402|type=mRNA|length=1866bp|location=Sequence derived from alignment at OGUI01000017.1:4103455..4105320+ (Aspergillus niger N402)
ATGCCTCGCTGGAAGCGCAGTAAACCACGCCCCGAGAAGGATGCAGCGAC
CAGCGGCGGCAATTCCGGTGTATCTTCCGACTCCCCTGCAGCCCATTCTA
CTGCTGTGGCCTCCCTTCGCGCTGTTAGTGGCTGCTCTCCCGATGCCATA
AGAACGACAGCAGTAACCCAAGACCAGGCACCATCCGACCCGGAAGCGAT
TCGAAAGCTAGCCAAGCAACACGCCGAGTTCGGACCCCTGGGCGATCCGT
CGCATCTCTACACCAGCGAGCATCCTGGCGGAGAGATCCCTGATCCGGTC
ATTGATGAGCCTCCGTACTTCTTCGTTCTGACCACCTACGTCAGCTTCCT
CGTGCTAATCTTCCTCGGCCACTTCCATGATTTCGTGGATAAGTGGTTTC
GCTCCCATACGTACCGCCACTTGAAACCTCAGAATGGCTATGCGTCATTG
TACAGCGATTTCGAGAGTTTCTATACGCGACGCTTGAAGCAACGGATCAA
TGACTGCTTCGAGAGGCCGATCATTGGTGTTCCGGGCCGGCATGTTACGC
TGTTGGACCGGACGACTGAAGACAACCTCCACTTTAGACTTACGGGCACG
ACGACGGATACGCTCAATCTGAGTTCGTATAACTATCTGGGTTTTGCTCA
ATCGGAAGGCCCATGCACCGACTATGCCGAGGAGGTACTCCGGCGGGATG
GCATTTGCATTGCATCGACCCCCGAAGGGGGGATTACAAAGCTGCATGCC
GAGGTGGAAGATCAAATTGCTCGCTTTGTGGGGAAGGAAGCCGCAGTTGT
GTTCTCCATGGGCTTTGTGACGAATGCGACTATCTTCCCTTCCATCATGG
AAAAGGGATGTCTGATCCTGTCCGATGAACTCAACCATGCATCTATCCGA
TTTGGCGCTCGTCTGTCTGGCGCGGCCATCCAGGTCTTCGCGCACAACAA
CATGGCTGACCTGGAAAAGCGTCTCAGGGAGGCAATCTCTCAAGGTCAGC
CCCGCACGCATAGGCCATGGAAGAAAATTCTTGTTACCGTGGAGGGTCTG
TTCTCCATGGAAGGTACCATGTGCAATCTTCCTCGGATACTGGAATTGAA
GAAGAAATACAAGTTCCACCTGTTTGTGGACGAGGCACACTCCATTGGAG
CCGTTGGACGTCACGGACGCGGAGTCTGTGACTACTTCAAAGTAGATCCG
GCAGAGGTCGACATCCTGATGGGAACATTCACCAAGTCCTTCGGAGCCAA
CGGTGGCTATATCGCGGCCGACAAAGCCATCATTGACAAGATTCGCTGCA
CAAACGCTGGTCAAATATTTGGAGAAGCACCGTCGCTTCCTGTTCTTGCT
CAGATCTACTCCTCGCTGCGACTCATTGCTGATGAGGATCCTCTTCACCC
GGGCGAGGGACGGGAGCGGATGCAGCGCCTCGCCTTCAACTCGCGCTACC
TTCGGCTCGGATTGAAGAGACTGGGTTTCATCGTCTACGGACACGATGAC
TCTCCAATTGTGCCATTGATGCTGTACAATCCGGCCAAAATGCCTGCCTT
CTCGCGAGAAATGCTGCGTCGCAAAATCTCCGTGGTTGTTGTGACCTATC
CTGCCACGCCCCTGGAGCTGTCTCGGGCGCGACTCTGCATCTCAGCCGCC
CACACCAAAGACGACCTGGATCGCATCCTGCAGGCGTGCGATGAAATCGG
CGATGCGTTGGAGCTGAAATTCTCTTCGGGCATTGCAGGTGGCTTGAGGG
AACCATTGTCTGCGCACGATAGCTCCAAGGGACCCAGGACGATTGAGCCT
CCCCGTTGGCCTCTCGAAGAGGTCATTGCCAGGGGCACGCACGACGCAAA
TCAACCGTTATACTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4103455..4105320+ >ATCC64974_108780-T1 ID=ATCC64974_108780-T1|Name=ATCC64974_108780-T1|organism=Aspergillus niger N402|type=CDS|length=1866bp|location=Sequence derived from alignment at OGUI01000017.1:4103455..4105320+ (Aspergillus niger N402)
ATGCCTCGCTGGAAGCGCAGTAAACCACGCCCCGAGAAGGATGCAGCGAC
CAGCGGCGGCAATTCCGGTGTATCTTCCGACTCCCCTGCAGCCCATTCTA
CTGCTGTGGCCTCCCTTCGCGCTGTTAGTGGCTGCTCTCCCGATGCCATA
AGAACGACAGCAGTAACCCAAGACCAGGCACCATCCGACCCGGAAGCGAT
TCGAAAGCTAGCCAAGCAACACGCCGAGTTCGGACCCCTGGGCGATCCGT
CGCATCTCTACACCAGCGAGCATCCTGGCGGAGAGATCCCTGATCCGGTC
ATTGATGAGCCTCCGTACTTCTTCGTTCTGACCACCTACGTCAGCTTCCT
CGTGCTAATCTTCCTCGGCCACTTCCATGATTTCGTGGATAAGTGGTTTC
GCTCCCATACGTACCGCCACTTGAAACCTCAGAATGGCTATGCGTCATTG
TACAGCGATTTCGAGAGTTTCTATACGCGACGCTTGAAGCAACGGATCAA
TGACTGCTTCGAGAGGCCGATCATTGGTGTTCCGGGCCGGCATGTTACGC
TGTTGGACCGGACGACTGAAGACAACCTCCACTTTAGACTTACGGGCACG
ACGACGGATACGCTCAATCTGAGTTCGTATAACTATCTGGGTTTTGCTCA
ATCGGAAGGCCCATGCACCGACTATGCCGAGGAGGTACTCCGGCGGGATG
GCATTTGCATTGCATCGACCCCCGAAGGGGGGATTACAAAGCTGCATGCC
GAGGTGGAAGATCAAATTGCTCGCTTTGTGGGGAAGGAAGCCGCAGTTGT
GTTCTCCATGGGCTTTGTGACGAATGCGACTATCTTCCCTTCCATCATGG
AAAAGGGATGTCTGATCCTGTCCGATGAACTCAACCATGCATCTATCCGA
TTTGGCGCTCGTCTGTCTGGCGCGGCCATCCAGGTCTTCGCGCACAACAA
CATGGCTGACCTGGAAAAGCGTCTCAGGGAGGCAATCTCTCAAGGTCAGC
CCCGCACGCATAGGCCATGGAAGAAAATTCTTGTTACCGTGGAGGGTCTG
TTCTCCATGGAAGGTACCATGTGCAATCTTCCTCGGATACTGGAATTGAA
GAAGAAATACAAGTTCCACCTGTTTGTGGACGAGGCACACTCCATTGGAG
CCGTTGGACGTCACGGACGCGGAGTCTGTGACTACTTCAAAGTAGATCCG
GCAGAGGTCGACATCCTGATGGGAACATTCACCAAGTCCTTCGGAGCCAA
CGGTGGCTATATCGCGGCCGACAAAGCCATCATTGACAAGATTCGCTGCA
CAAACGCTGGTCAAATATTTGGAGAAGCACCGTCGCTTCCTGTTCTTGCT
CAGATCTACTCCTCGCTGCGACTCATTGCTGATGAGGATCCTCTTCACCC
GGGCGAGGGACGGGAGCGGATGCAGCGCCTCGCCTTCAACTCGCGCTACC
TTCGGCTCGGATTGAAGAGACTGGGTTTCATCGTCTACGGACACGATGAC
TCTCCAATTGTGCCATTGATGCTGTACAATCCGGCCAAAATGCCTGCCTT
CTCGCGAGAAATGCTGCGTCGCAAAATCTCCGTGGTTGTTGTGACCTATC
CTGCCACGCCCCTGGAGCTGTCTCGGGCGCGACTCTGCATCTCAGCCGCC
CACACCAAAGACGACCTGGATCGCATCCTGCAGGCGTGCGATGAAATCGG
CGATGCGTTGGAGCTGAAATTCTCTTCGGGCATTGCAGGTGGCTTGAGGG
AACCATTGTCTGCGCACGATAGCTCCAAGGGACCCAGGACGATTGAGCCT
CCCCGTTGGCCTCTCGAAGAGGTCATTGCCAGGGGCACGCACGACGCAAA
TCAACCGTTATACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0030170 | pyridoxal phosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108780-T1.exon1 | ATCC64974_108780-T1.exon1 | Aspergillus niger N402 | exon |
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108780-T1 | ATCC64974_108780-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260Z3X |
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR004839 |
| DBxref | PFAM:PF00155 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4103455..4105320 + |
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