You are here

Home

ATCC64974_109040-T1, ATCC64974_109040-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109040-T1
Unique NameATCC64974_109040-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4189587..4190453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109040-T1 ID=ATCC64974_109040-T1|Name=ATCC64974_109040-T1|organism=Aspergillus niger N402|type=mRNA|length=867bp|location=Sequence derived from alignment at OGUI01000017.1:4189587..4190453+ (Aspergillus niger N402)
ATGGTCTCCACGCGACACCATCCCCGCGACTTTCCACCCCCCGCGACTGG
GAGAGCTTCGCCGCCATCGACACCATCTACGTCTTCTTCGAGTGCCAATG
GCTCCGGAAAAAAATGGGTGCATGCCCCGTCTGGTGCCATTACCCTGTGG
TTGATCTTCTCCATCCCGCTAGTACTATGGGACGCCAGCTACGTGCTGCT
GCGCCCTCACCTGAAGCTCGATAGCAAACTACATTCCCCGATCTGGACTC
CGTATGCGCTGTACGGCACAATTGATTACCTCTACGGCTGGCCGGCATTC
AATGCGCGCAATGAGTTTACCATTGCGCAAACTATCCTGAATCTTGTCGA
GACTGCTGGATACATTTACTACCTGGTGATTGTGTATACGTATGGGGTTA
CAGCGGGAAACACGGCGCGAGGCCAACGTAAAACCAAGAAAGGGCCATTC
TGGATGCTGAAAGAGTCCAAGGTTGTTTCTGGTCGTCCCGGCGCGACTGC
GCTTCTGGTGGCATATACCGCCTCTGTGATGACTCTTGCGAAGACGGCCC
TATTCTGTGAGCTGCCATCATGCTGTCAGGGTTGGTTGGGAATATGACTC
TGATGAATCTGTTATAGGGCTGAACGAGGCTTTCTCTGGCTTCGCAGACG
TTGATCGCAGCGACCCTTGGAGCTTGTTCTTCCTGTGGATCATACCCAAG
TAGGCTTTATTTCCATTGTTGGTGTTGTTGGCTCATCTAACGGTCGCATT
AGTGCTCTCTGGGTCATCTTCCCTAGCTATGGCGTCTATGCTCTGGGTTC
AGAGATCCAGGCGTCACTAGAGAGTGCCACGCCGCGTCAGCGAGTTGGGC
GGCCCAAATCGTCGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4189587..4190453+

>ATCC64974_109040-T1 ID=ATCC64974_109040-T1|Name=ATCC64974_109040-T1|organism=Aspergillus niger N402|type=CDS|length=2259bp|location=Sequence derived from alignment at OGUI01000017.1:4189587..4190453+ (Aspergillus niger N402)
ATGGTCTCCACGCGACACCATCCCCGCGACTTTCCACCCCCCGCGACTGG
GAGAGCTTCGCCGCCATCGACACCATCTACGTCTTCTTCGAGTGCCAATG
GCTCCGGAAAAAAATGGGTGCATGCCCCGTCTGGTGCCATTACCCTGTGG
TTGATCTTCTCCATCCCGCTAGTACTATGGGACGCCAGCTACGTGCTGCT
GCGCCCTCACCTGAAGCTCGATAGCAAACTACATTCCCCGATCTGGACTC
CGTATGCGCTGTACGGCACAATTGATTACCTCTACGGCTGGCCGGCATTC
AATGCGCGCAATGAGTTTACCATTGCGCAAACTATCCTGAATCTTGTCGA
GACTGCTGGATACATTTACTACCTGGTGATTGTGTATACGTATGGGGTTA
CAGCGGGAAACACGGCGCGAGGCCAACGTAAAACCAAGAAAGGGCCATTC
TGGATGCTGAAAGAGTCCAAGGTTGTTTCTGGTCGTCCCGGCGCGACTGC
GCTTCTGGTGGCATATACCGCCTCTGTGATGACTCTTGCGAAGACGGCCC
TATTCTGGCTGAACGAGGCTTTCTCTGGCTTCGCAGACGTTGATCGCAGC
GACCCTTGGAGCTTGTTCTTCCTGTGGATCATACCCAATGCTCTCTGGGT
CATCTTCCCTAGCTATGGCGTCTATGCTCTGGGTTCAGAGATCCAGGCGT
CACTAGAGAGTGCCACGCCGCGTCAGCGAGTTGGGCGGCCCAAATCGTCG
TAGATGGTCTCCACGCGACACCATCCCCGCGACTTTCCACCCCCCGCGAC
TGGGAGAGCTTCGCCGCCATCGACACCATCTACGTCTTCTTCGAGTGCCA
ATGGCTCCGGAAAAAAATGGGTGCATGCCCCGTCTGGTGCCATTACCCTG
TGGTTGATCTTCTCCATCCCGCTAGTACTATGGGACGCCAGCTACGTGCT
GCTGCGCCCTCACCTGAAGCTCGATAGCAAACTACATTCCCCGATCTGGA
CTCCGTATGCGCTGTACGGCACAATTGATTACCTCTACGGCTGGCCGGCA
TTCAATGCGCGCAATGAGTTTACCATTGCGCAAACTATCCTGAATCTTGT
CGAGACTGCTGGATACATTTACTACCTGGTGATTGTGTATACGTATGGGG
TTACAGCGGGAAACACGGCGCGAGGCCAACGTAAAACCAAGAAAGGGCCA
TTCTGGATGCTGAAAGAGTCCAAGGTTGTTTCTGGTCGTCCCGGCGCGAC
TGCGCTTCTGGTGGCATATACCGCCTCTGTGATGACTCTTGCGAAGACGG
CCCTATTCTGGCTGAACGAGGCTTTCTCTGGCTTCGCAGACGTTGATCGC
AGCGACCCTTGGAGCTTGTTCTTCCTGTGGATCATACCCAATGCTCTCTG
GGTCATCTTCCCTAGCTATGGCGTCTATGCTCTGGGTTCAGAGATCCAGG
CGTCACTAGAGAGTGCCACGCCGCGTCAGCGAGTTGGGCGGCCCAAATCG
TCGTAGATGGTCTCCACGCGACACCATCCCCGCGACTTTCCACCCCCCGC
GACTGGGAGAGCTTCGCCGCCATCGACACCATCTACGTCTTCTTCGAGTG
CCAATGGCTCCGGAAAAAAATGGGTGCATGCCCCGTCTGGTGCCATTACC
CTGTGGTTGATCTTCTCCATCCCGCTAGTACTATGGGACGCCAGCTACGT
GCTGCTGCGCCCTCACCTGAAGCTCGATAGCAAACTACATTCCCCGATCT
GGACTCCGTATGCGCTGTACGGCACAATTGATTACCTCTACGGCTGGCCG
GCATTCAATGCGCGCAATGAGTTTACCATTGCGCAAACTATCCTGAATCT
TGTCGAGACTGCTGGATACATTTACTACCTGGTGATTGTGTATACGTATG
GGGTTACAGCGGGAAACACGGCGCGAGGCCAACGTAAAACCAAGAAAGGG
CCATTCTGGATGCTGAAAGAGTCCAAGGTTGTTTCTGGTCGTCCCGGCGC
GACTGCGCTTCTGGTGGCATATACCGCCTCTGTGATGACTCTTGCGAAGA
CGGCCCTATTCTGGCTGAACGAGGCTTTCTCTGGCTTCGCAGACGTTGAT
CGCAGCGACCCTTGGAGCTTGTTCTTCCTGTGGATCATACCCAATGCTCT
CTGGGTCATCTTCCCTAGCTATGGCGTCTATGCTCTGGGTTCAGAGATCC
AGGCGTCACTAGAGAGTGCCACGCCGCGTCAGCGAGTTGGGCGGCCCAAA
TCGTCGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_109040ATCC64974_109040Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109040-T1.exon1ATCC64974_109040-T1.exon1Aspergillus niger N402exon
ATCC64974_109040-T1.exon2ATCC64974_109040-T1.exon2Aspergillus niger N402exon
ATCC64974_109040-T1.exon3ATCC64974_109040-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109040-T1.cdsATCC64974_109040-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109040-T1ATCC64974_109040-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4189587..4190453 +
Powered by Drupal