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ATCC64974_109170-T1, ATCC64974_109170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109170-T1
Unique NameATCC64974_109170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4229243..4230435-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109170-T1 ID=ATCC64974_109170-T1|Name=ATCC64974_109170-T1|organism=Aspergillus niger N402|type=mRNA|length=1193bp|location=Sequence derived from alignment at OGUI01000017.1:4229243..4230435- (Aspergillus niger N402)
ATGTCAGAACTATACTGTCCTATTCCGCCCAGGGATCAGGACATCTACCG
CTTCCGGCAGCAGTTTGGAGCGAACCTGGGATCTACCTTTGTACTCGGTC
CGCACGATAATACTGGCGAGTCAAATGAATTACAGTTACTGAAAACGTAG
GTACTAGAAACCACATTAAGAATATCCTTTATGGTCATCATGTCTCTTCT
ATAGGTACTAAATAGTAGTATGTCATAACCAGGTCATTAGCATCCACTGG
ACTCGAGCAAACAAGACAGAAGTGGCAATCCCACTGGCACTCTGCATTGA
CCGACGATGACCTCGTCTGGCTCAAGGATGTAGCGCAATGCAGAACACTC
CGTTTACCATTGAGCTTCTACTCCCTCGGACCCCTGTTCTGTCGGGGAAC
AGCCTTTGAAGGGGATCCATCAGAGGTGTACCACCATTGCTGGAGTACTG
TGAAGCATCTAATCGAAAAATGTTGGTTTCACGGTATCGGAATCCTCATT
GATTTCCAGGCCAGCGCCAGCGGTATAAACCTCTGTGCCAGTGCGAAAGA
TCGGACAATAGCTCGGGACTGCGTCGCTTTTCTTGCTCAGGAAATAACCT
TCCATTCTATGTCCGCGGTAGTCGGACTTTCAGTATCCTCCGGATGTGAA
CCTGCCCCTGACATGTGCGAATGCTACGATGAGATCCTTAAGATAGCCAA
TGCCATTGACGCATGTTTGCCTGTATACATCGACGACAACCAAGCTCAAT
GCAACAAACGAGTCTTCAAGGGCTGCGAAAGCGACATCCCTCAGTTCAAG
AGCGACATCTCAATCGGTAAAATCCAAATACCTAGCCAAATGATGCTACC
CGAAACAGAGGTCCGAGAGAAGATCAACAAAGCCAAAGCCGAACGATCAG
GATTCCAGGAAAAGGTTTTGTCGCAAGTCTCGGAATCTTGGGGCTCGAAC
GAACGTCAAAGCTTCGTCCATGGCTGGAACCTGGGATACGATGATGCGTT
GCGCTTCTTTGGCGCTGCTGTTCAGGGCATCTTGGCTCCGCGAAAAGGTG
CAGACAAGATCTATGATATAGAGTTGTGGGTCCAGCAGCGCAAAAGAGAT
ATAGACCCGGAGCAGCTCGGGGAGAATTCTGCGGCATGGGAGGATGGTCT
TCGGAGAGGTATTCAAGATTTTTACAACATCATCGGAATTTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:4229243..4230435-

>ATCC64974_109170-T1 ID=ATCC64974_109170-T1|Name=ATCC64974_109170-T1|organism=Aspergillus niger N402|type=CDS|length=2214bp|location=Sequence derived from alignment at OGUI01000017.1:4229243..4230435- (Aspergillus niger N402)
GTCATTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGGCAATCCC
ACTGGCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAAGGATGTA
GCGCAATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCCTCGGACC
CCTGTTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAGGTGTACC
ACCATTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTGGTTTCAC
GGTATCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTATAAACCT
CTGTGCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTCGCTTTTC
TTGCTCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGGACTTTCA
GTATCCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCTACGATGA
GATCCTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTATACATCG
ACGACAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTGCGAAAGC
GACATCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCCAAATACC
TAGCCAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATCAACAAAG
CCAAAGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCAAGTCTCG
GAATCTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCTGGAACCT
GGGATACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAGGGCATCT
TGGCTCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTTGTGGGTC
CAGCAGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGAATTCTGC
GGCATGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTACAACATCA
TCGGAATTTGAATGTCAGAACTATACTGTCCTATTCCGCCCAGGGATCAG
GACATCTACCGCTTCCGGCAGCAGTTTGGAGCGAACCTGGGATCTACCTT
TGTACTCGGTCCGCACGATAATACTGGCGAGTCAAATGAATTACAGTTAC
TGAAAACGTCATTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGG
CAATCCCACTGGCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAA
GGATGTAGCGCAATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCC
TCGGACCCCTGTTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAG
GTGTACCACCATTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTG
GTTTCACGGTATCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTA
TAAACCTCTGTGCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTC
GCTTTTCTTGCTCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGG
ACTTTCAGTATCCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCT
ACGATGAGATCCTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTA
TACATCGACGACAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTG
CGAAAGCGACATCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCC
AAATACCTAGCCAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATC
AACAAAGCCAAAGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCA
AGTCTCGGAATCTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCT
GGAACCTGGGATACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAG
GGCATCTTGGCTCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTT
GTGGGTCCAGCAGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGA
ATTCTGCGGCATGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTAC
AACATCATCGGAATTTGAATGTCAGAACTATACTGTCCTATTCCGCCCAG
GGATCAGGACATCTACCGCTTCCGGCAGCAGTTTGGAGCGAACCTGGGAT
CTACCTTTGTACTCGGTCCGCACGATAATACTGGCGAGTCAAATGAATTA
CAGTTACTGAAAAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_109170ATCC64974_109170Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109170-T1ATCC64974_109170-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109170-T1.cdsATCC64974_109170-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109170-T1.exon2ATCC64974_109170-T1.exon2Aspergillus niger N402exon
ATCC64974_109170-T1.exon1ATCC64974_109170-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteCAZy:GH5_49
DBxrefInterPro:IPR017853
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4229243..4230435 -
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