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ATCC64974_109260-T1, ATCC64974_109260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109260-T1
Unique NameATCC64974_109260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4253582..4254974-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109260-T1 ID=ATCC64974_109260-T1|Name=ATCC64974_109260-T1|organism=Aspergillus niger N402|type=mRNA|length=1393bp|location=Sequence derived from alignment at OGUI01000017.1:4253582..4254974- (Aspergillus niger N402)
ATGAGTCTCGCACGTCCGGCCCGATGCCTCTTCTGCAGCTTCTCGCGTGC
GGCCTCCGCCGGCCCTCGCGTGCCTAGTCGCCAGTTCCACTTGTCATCGA
TACAGCTCTCCGATCGGAAACCGAAGGTCCCAGAAGTCAACAAGGCCCCC
GAAGGAAAGACCCTGGATGAAATCTACCGGGAAGTGAAGCTCGACGACTT
CAAGCACTATACCGAGGAGGAAAAGGCCGCCCTCCGGGAAGAATACTCGC
CCGAACAGATTGCCGCCATTGAGGCCGGTGAGAAGGCCATTGACCCCAAA
GACCTGGCTGAACAGTTCCGTCTTCGTCGGGATCCCATGAGATTGAAGTA
TCTCGATGATTTCTCGGTCATTGAACCCGGCGTGGACAAGCACGTTCGCG
CCCCCAAGTCCAACTCCGACTACAACGCGACATTCAAGACCGAGGATGAT
TTCATGGAAGACTTTGCCCGCTTCTTCGCCGAATCATCGGAGGATCCCCA
GCCGGCAGATTTCGTACGATTCCTCGAGACCACCCGGGTGACTCACGGCA
AGGAGGAGAACGAGCTCAACGGACACAGCGCGCTCGCACCCAATCTCTTG
AACGATGGGGAGACCTTGGAACACATGGGCGACGAGGTGGTGGCGAGGCC
GCAATACCGCACAAAGACTGGAGAGCTTACGTTCTTGAACCCCGACGAAC
CCAACGAGGCGGAGAAGAGACTTTTCCAGGTCACGGGCTTCGGTAGAGAT
TACCTCAAGTCTCTGTACATAAAGGACCTCGTTATTCGCCGTGTCAGCAA
CCAGACTCGACTGGGTAAGGTCCCGAGTATGTCCGTCGTTACGGTCGCCG
GTAACCAGAACGGTCTTATGGGTATCGGAATCGCCAAGTCCGATGAAATT
ATCGATGCCTGCCAACAAGCTCGCGCTCGGGCTGTCAAGAACATGCAACC
TGTGCCGCGCTACGAGAAGCGGACCATCTTCGGTGACGTCGAGGGCAAGG
TCGGAGCTGTGCAGTTGAAGTTGATGCACCGTCCCCCAGGTACGATTGTC
CGAACCCTGAAATGTTATTTCAACGCTAATGCTTAATGTTCCCACAGGTT
TCGGTCTCCGCTGCCAGCACCTGATCTTCGAAATGTGCCGTGCGGCCGGT
ATTCACGATATCGCAGCCCGTGTCAACCGCTCCAGAAACCCCATGAACAC
AGTTAAGGCAGCCTACGAGGCGCTCATGAGCCAGCGCAACCCCGAGGATA
TTGCCCGTGCCCGGGGTAAGAAGATGGTCGATGTACGGGGAGTGTACTAT
TCCGGAAGAGGCATTCAACAGGACATGTATGCTCGCCCGGTTCGTGATCG
GGAACATCGTGAGCGGCCGTCCCGGGAAGCTCGGCGAGCTTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:4253582..4254974-

>ATCC64974_109260-T1 ID=ATCC64974_109260-T1|Name=ATCC64974_109260-T1|organism=Aspergillus niger N402|type=CDS|length=2670bp|location=Sequence derived from alignment at OGUI01000017.1:4253582..4254974- (Aspergillus niger N402)
GTTTCGGTCTCCGCTGCCAGCACCTGATCTTCGAAATGTGCCGTGCGGCC
GGTATTCACGATATCGCAGCCCGTGTCAACCGCTCCAGAAACCCCATGAA
CACAGTTAAGGCAGCCTACGAGGCGCTCATGAGCCAGCGCAACCCCGAGG
ATATTGCCCGTGCCCGGGGTAAGAAGATGGTCGATGTACGGGGAGTGTAC
TATTCCGGAAGAGGCATTCAACAGGACATGTATGCTCGCCCGGTTCGTGA
TCGGGAACATCGTGAGCGGCCGTCCCGGGAAGCTCGGCGAGCTTGAATGA
GTCTCGCACGTCCGGCCCGATGCCTCTTCTGCAGCTTCTCGCGTGCGGCC
TCCGCCGGCCCTCGCGTGCCTAGTCGCCAGTTCCACTTGTCATCGATACA
GCTCTCCGATCGGAAACCGAAGGTCCCAGAAGTCAACAAGGCCCCCGAAG
GAAAGACCCTGGATGAAATCTACCGGGAAGTGAAGCTCGACGACTTCAAG
CACTATACCGAGGAGGAAAAGGCCGCCCTCCGGGAAGAATACTCGCCCGA
ACAGATTGCCGCCATTGAGGCCGGTGAGAAGGCCATTGACCCCAAAGACC
TGGCTGAACAGTTCCGTCTTCGTCGGGATCCCATGAGATTGAAGTATCTC
GATGATTTCTCGGTCATTGAACCCGGCGTGGACAAGCACGTTCGCGCCCC
CAAGTCCAACTCCGACTACAACGCGACATTCAAGACCGAGGATGATTTCA
TGGAAGACTTTGCCCGCTTCTTCGCCGAATCATCGGAGGATCCCCAGCCG
GCAGATTTCGTACGATTCCTCGAGACCACCCGGGTGACTCACGGCAAGGA
GGAGAACGAGCTCAACGGACACAGCGCGCTCGCACCCAATCTCTTGAACG
ATGGGGAGACCTTGGAACACATGGGCGACGAGGTGGTGGCGAGGCCGCAA
TACCGCACAAAGACTGGAGAGCTTACGTTCTTGAACCCCGACGAACCCAA
CGAGGCGGAGAAGAGACTTTTCCAGGTCACGGGCTTCGGTAGAGATTACC
TCAAGTCTCTGTACATAAAGGACCTCGTTATTCGCCGTGTCAGCAACCAG
ACTCGACTGGGTAAGGTCCCGAGTATGTCCGTCGTTACGGTCGCCGGTAA
CCAGAACGGTCTTATGGGTATCGGAATCGCCAAGTCCGATGAAATTATCG
ATGCCTGCCAACAAGCTCGCGCTCGGGCTGTCAAGAACATGCAACCTGTG
CCGCGCTACGAGAAGCGGACCATCTTCGGTGACGTCGAGGGCAAGGTCGG
AGCTGTGCAGTTGAAGTTGATGCACCGTCCCCCAGGTTTCGGTCTCCGCT
GCCAGCACCTGATCTTCGAAATGTGCCGTGCGGCCGGTATTCACGATATC
GCAGCCCGTGTCAACCGCTCCAGAAACCCCATGAACACAGTTAAGGCAGC
CTACGAGGCGCTCATGAGCCAGCGCAACCCCGAGGATATTGCCCGTGCCC
GGGGTAAGAAGATGGTCGATGTACGGGGAGTGTACTATTCCGGAAGAGGC
ATTCAACAGGACATGTATGCTCGCCCGGTTCGTGATCGGGAACATCGTGA
GCGGCCGTCCCGGGAAGCTCGGCGAGCTTGAATGAGTCTCGCACGTCCGG
CCCGATGCCTCTTCTGCAGCTTCTCGCGTGCGGCCTCCGCCGGCCCTCGC
GTGCCTAGTCGCCAGTTCCACTTGTCATCGATACAGCTCTCCGATCGGAA
ACCGAAGGTCCCAGAAGTCAACAAGGCCCCCGAAGGAAAGACCCTGGATG
AAATCTACCGGGAAGTGAAGCTCGACGACTTCAAGCACTATACCGAGGAG
GAAAAGGCCGCCCTCCGGGAAGAATACTCGCCCGAACAGATTGCCGCCAT
TGAGGCCGGTGAGAAGGCCATTGACCCCAAAGACCTGGCTGAACAGTTCC
GTCTTCGTCGGGATCCCATGAGATTGAAGTATCTCGATGATTTCTCGGTC
ATTGAACCCGGCGTGGACAAGCACGTTCGCGCCCCCAAGTCCAACTCCGA
CTACAACGCGACATTCAAGACCGAGGATGATTTCATGGAAGACTTTGCCC
GCTTCTTCGCCGAATCATCGGAGGATCCCCAGCCGGCAGATTTCGTACGA
TTCCTCGAGACCACCCGGGTGACTCACGGCAAGGAGGAGAACGAGCTCAA
CGGACACAGCGCGCTCGCACCCAATCTCTTGAACGATGGGGAGACCTTGG
AACACATGGGCGACGAGGTGGTGGCGAGGCCGCAATACCGCACAAAGACT
GGAGAGCTTACGTTCTTGAACCCCGACGAACCCAACGAGGCGGAGAAGAG
ACTTTTCCAGGTCACGGGCTTCGGTAGAGATTACCTCAAGTCTCTGTACA
TAAAGGACCTCGTTATTCGCCGTGTCAGCAACCAGACTCGACTGGGTAAG
GTCCCGAGTATGTCCGTCGTTACGGTCGCCGGTAACCAGAACGGTCTTAT
GGGTATCGGAATCGCCAAGTCCGATGAAATTATCGATGCCTGCCAACAAG
CTCGCGCTCGGGCTGTCAAGAACATGCAACCTGTGCCGCGCTACGAGAAG
CGGACCATCTTCGGTGACGTCGAGGGCAAGGTCGGAGCTGTGCAGTTGAA
GTTGATGCACCGTCCCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_109260ATCC64974_109260Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109260-T1ATCC64974_109260-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109260-T1.cdsATCC64974_109260-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109260-T1.exon2ATCC64974_109260-T1.exon2Aspergillus niger N402exon
ATCC64974_109260-T1.exon1ATCC64974_109260-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092634G9
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR005324
DBxrefInterPro:IPR013810
DBxrefPFAM:PF03719
DBxrefPFAM:PF00333
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4253582..4254974 -
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