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ATCC64974_109270-T1, ATCC64974_109270-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109270-T1
Unique NameATCC64974_109270-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4255410..4257011+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109270-T1 ID=ATCC64974_109270-T1|Name=ATCC64974_109270-T1|organism=Aspergillus niger N402|type=mRNA|length=1602bp|location=Sequence derived from alignment at OGUI01000017.1:4255410..4257011+ (Aspergillus niger N402)
ATGCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACAAAG
CTCACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGGGGTAAGGG
GCCCCGCGAGCCGCACAAGGAGGTACCTCCGATTGGCTTCACTTTCAAGA
ACCGACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACATT
GTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGG
CAAGTACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGCG
TGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCC
GGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGA
AGAGAAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTCG
ACGACTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAAC
TCCATCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCCC
GAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACT
CCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAGT
CTGGGCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACGC
TCGCGACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCCA
CGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATT
GACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGGC
CTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGG
CGCGCGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCGG
TACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACA
TGTTGAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCT
AG
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Coding sequence (CDS) from alignment at OGUI01000017.1:4255410..4257011+

>ATCC64974_109270-T1 ID=ATCC64974_109270-T1|Name=ATCC64974_109270-T1|organism=Aspergillus niger N402|type=CDS|length=1602bp|location=Sequence derived from alignment at OGUI01000017.1:4255410..4257011+ (Aspergillus niger N402)
ATGCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACAAAG
CTCACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGGGGTAAGGG
GCCCCGCGAGCCGCACAAGGAGGTACCTCCGATTGGCTTCACTTTCAAGA
ACCGACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACATT
GTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGG
CAAGTACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGCG
TGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCC
GGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGA
AGAGAAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTCG
ACGACTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAAC
TCCATCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCCC
GAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACT
CCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAGT
CTGGGCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACGC
TCGCGACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCCA
CGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATT
GACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGGC
CTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGG
CGCGCGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCGG
TACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACA
TGTTGAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030697S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
GO:0008173RNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_109270ATCC64974_109270Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109270-T1.exon1ATCC64974_109270-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109270-T1.cdsATCC64974_109270-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109270-T1ATCC64974_109270-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR025795
DBxrefInterPro:IPR002792
DBxrefInterPro:IPR030390
DBxrefInterPro:IPR030391
DBxrefInterPro:IPR010280
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4255410..4257011 +
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