You are here

Home

ATCC64974_109290-T1, ATCC64974_109290-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109290-T1
Unique NameATCC64974_109290-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4258973..4260495-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109290-T1 ID=ATCC64974_109290-T1|Name=ATCC64974_109290-T1|organism=Aspergillus niger N402|type=mRNA|length=1523bp|location=Sequence derived from alignment at OGUI01000017.1:4258973..4260495- (Aspergillus niger N402)
ATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAAGTATGCCATTCACCA
TCCCCATATCACACAATACTTGAGCATCCGCTAACTTGCACGTTCTCTCT
GTTCAGCGGTACCGGTTATTCCAAGCTTGGTAGGTCTCCTGATAGCTTCC
ACGTGGAGCTCCGCCGGCAAGCTCCAGGCTGACAAGTCTCCAGGTTTCGC
CGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCGACCAAAG
CTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCCTGTTGCG
AACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCCATCTATC
CGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGATGAAGCTC
TGGCAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCATTCGCCAT
GGTCAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGAATTCCAT
CTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTCCTCACTG
AGCCGGTAAGACCCCTCGATTCCTTCCAATGGCTCTTCGAGGATGCAATG
CTGATCGGGTGTTGTAAACAAAGCCCTTGAACCCCCCCGAGAACCGTGAG
AACACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACAT
TGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGG
TGACCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTC
ACACACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAA
GAGTATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGC
TCCGTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTC
AAGGAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCG
CTACGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCA
ACGGCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCC
GAGATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCT
GCCTAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAA
GGGGTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAG
GACTTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACG
CATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGG
ACGTGGCAGTTGTGACACACAAGAGACAGCGCCATGGACCGTGGTTCGGA
GGTAGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAA
GGCAGAGTACGACGAGATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGT
TGGGAGGCCCTGGCAGTTCGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4258973..4260495-

>ATCC64974_109290-T1 ID=ATCC64974_109290-T1|Name=ATCC64974_109290-T1|organism=Aspergillus niger N402|type=CDS|length=5280bp|location=Sequence derived from alignment at OGUI01000017.1:4258973..4260495- (Aspergillus niger N402)
CCCTTGAACCCCCCCGAGAACCGTGAGAACACCGCCGAGATCATGTTCGA
GTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGCCC
TTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCGGA
ACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCCGA
AGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCGCG
ATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGGAT
AGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTGTG
CCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCGCC
TGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCGAT
GTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAGAT
TTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGTGA
TCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTGTG
TTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAGCG
TGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCGCA
GCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGTGACACACAAG
AGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACGCC
GGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGGTC
CTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGTAA
GTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCG
ACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCC
TGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCC
ATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGAT
GAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCAT
TCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGA
ATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTC
CTCACTGAGCCGCGGTACCGGTTATTCCAAGCTTGATGGCTTCCCAGACT
CCGGCCGTTGTCATGGACAACCCTTGAACCCCCCCGAGAACCGTGAGAAC
ACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGC
CGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGA
CCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACA
CACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAG
TATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCC
GTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAG
GAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTA
CGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACG
GCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAG
ATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCC
TAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGG
GTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGAC
TTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCAT
TCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACG
TGGCAGTTGTGACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGT
AGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGC
AGAGTACGACGAGATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGG
GAGGCCCTGGCAGTTCGTAAGTTTCGCCGGTAACGACTCGCCCTCTTTCG
TCTTTCCCACCGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCC
TCCGCTGCCGGTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAG
CGGTGGTGGGGCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACT
TGGACTTCTTCATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGT
TATGCGATCAACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCA
CATGGAGCGGTTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGC
CGGAGGACCACTACTTCCTCCTCACTGAGCCGCGGTACCGGTTATTCCAA
GCTTGATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACCCTTGAACC
CCCCCGAGAACCGTGAGAACACCGCCGAGATCATGTTCGAGTCTTTCAAC
TGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTC
GTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCGGAACGGTCATCG
ATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCCGAAGGCTACGTC
ATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCGCGATATCACCTA
CTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGGATAGCAGCCTGA
AGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTGTGCCCCGACATC
GTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCGCCTGCTTAAGCA
CACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCGATGTGGGCTACG
AACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAGATTTATTCCTCG
GACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGTGATCCAGTCTTC
CCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTGTGTTGTCCGGTG
GATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAGCGTGACATCCGT
CATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGC
CAGAAGTGGTGGATTGGACGTGGCAGTTGTGACACACAAGAGACAGCGCC
ATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACGCCGGAGTTCCGC
AGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGGTCCTAGTATTGT
GCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGTAAGTTTCGCCGG
TAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCGACCAAAGCTG
GTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCCTGTTGCGAAC
AAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCCATCTATCCGC
GAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGATGAAGCTCTGG
CAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCATTCGCCATGGT
CAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGAATTCCATCTT
TAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTCCTCACTGAGC
CGCGGTACCGGTTATTCCAAGCTTGATGGCTTCCCAGACTCCGGCCGTTG
TCATGGACAACCCTTGAACCCCCCCGAGAACCGTGAGAACACCGCCGAGA
TCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCT
GTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTC
TCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTC
CCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATT
GCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGG
TGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACT
GCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAG
CCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGT
GAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCA
ACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTC
GACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAA
GAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGC
GTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCG
GAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGT
GACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCG
GACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGAC
GAGATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGG
CAGTTCGTAAGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCAC
CGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCG
GTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGG
GCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTT
CATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCA
ACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGG
TTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCA
CTACTTCCTCCTCACTGAGCCGCGGTACCGGTTATTCCAAGCTTGATGGC
TTCCCAGACTCCGGCCGTTGTCATGGACAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARP3ATCC64974_109290Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109290-T1ATCC64974_109290-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109290-T1.cdsATCC64974_109290-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109290-T1.exon4ATCC64974_109290-T1.exon4Aspergillus niger N402exon
ATCC64974_109290-T1.exon3ATCC64974_109290-T1.exon3Aspergillus niger N402exon
ATCC64974_109290-T1.exon2ATCC64974_109290-T1.exon2Aspergillus niger N402exon
ATCC64974_109290-T1.exon1ATCC64974_109290-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR020902
DBxrefInterPro:IPR004000
DBxrefPFAM:PF00022
Product actin nucleation center
ProductArp2/3 complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4258973..4260495 -
Powered by Drupal