You are here

Home

ATCC64974_109350-T1, ATCC64974_109350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109350-T1
Unique NameATCC64974_109350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4281240..4283675+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109350-T1 ID=ATCC64974_109350-T1|Name=ATCC64974_109350-T1|organism=Aspergillus niger N402|type=mRNA|length=2436bp|location=Sequence derived from alignment at OGUI01000017.1:4281240..4283675+ (Aspergillus niger N402)
ATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCGCGTGCTAAACGTCA
AAAGATGGACAAGTCTGAAACCGATCCCAAGGACAATCCGTACCTGGCTC
ACATGTATGCGGACGGCAACTCCAACACAGGGACCGATGGCACCACAGAT
CTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAGACCACCGCTGCGAT
GGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTTCAACGGTCAACCTT
TCTCCAGCAAATATGTTTCCATCCTGCAGACTCGTCGCGACCTGCCCGTG
CATGCTCAGAGGTGAGTTCCCATACCCATATAGATGGTTTGCCACATCGC
AAATGGGTTCTAACTATGTTTTTCTAAAGAGATGAATTCCTGGAGCTCTA
TCAAAAGTCGCAAATTCTGGTCTTCGTTGGTGAAACTGGTTCCGGAAAGA
CCACGCAGATTCCCCAGTTCGTCCTGTTCGATGACATGCCGCAAACTCAG
CGCAAGATGGTCGCTTGTACCCAGCCTCGTCGTGTCGCCGCCATGTCCGT
CGCTCAACGTGTCGCCGCCGAGCTGGATGTCAAGCTTGGAGAGGAAGTTG
GTTACAGCATCCGTTTCGAAGATATGACCAGTTCCAAGACTGTGCTCAAG
TACATGACGGACGGTATGCTTCTGAGAGAAGCCATGAACGACCACAACCT
CAACCGCTACAGTACCATCATTCTGGACGAAGCCCACGAGAGAACAATGG
CCACTGATGTTCTCATGGGTCTTCTCAAGGAAGTTGTTGTGCGCCGACCT
GACCTGAAGATCATTATCATGTCTGCTACTCTGGATGCTCAGAAGTTCCA
GCGTTACTTCAACGACGCCCCTCTCCTTGCGGTTCCCGGTCGTACTCATC
CTGTCGAGATCTTCTATACCCCTGAGCCTGAGCAGGATTATGTGGAAGCT
GCCATTCGCACCGTCCTGCAGATCCACGCGACAGAAGACGAAGGTGACAT
CCTTCTCTTCTTGACTGGTGAAGAAGAAATCGAAGACGCCTCACGGAAGA
TCTCGTTAGAAGCCGATGAGATGGTAAGAGAGGCCGATGCTGGTCCCATC
AAGGTCTACCCTCTCTACGGTAGTCTGCCCCCGCATATGCAGCAGCGCAT
TTTCGAACCGGCACCCCCTCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGA
AGGTCATTGTATCCACCAACATCGCTGAAACTTCGCTTACCATCGACGGT
ATCGTCTACGTCGTCGATCCTGGCTTCTCGAAGCAGAAGATCTACAACCC
CCGTATCCGTGTCGAGTCTCTTCTGGTATCTCCCATCTCGAAGGCTTCCG
CGCAACAGAGAGCTGGTCGTGCTGGTCGTACGCGCCCCGGAAAGTGCTTC
CGTCTGTACACTGAGGGGGCTTTTAAGAAGGAACTCATCGACCAGACATA
CCCCGAGATTCTGCGCTCGAACCTTTCTTCTACCGTGCTGGAATTGAAGA
AGCTAGGCATTGATGATCTTGTTCACTTCGATCTGATGGATCCTCCCGCT
CCGGAGACTTTGATGAGAGCTTTGGAAGAGCTCAACTATCTAGCTTGCTT
GGACGATGATGGAAACCTCACTCAGCTGGGACGCCTGGCCTCCGAGTTCC
CCCTTGATCCCGCACTTGCTGTGATGCTGATCAGCTCCCCCGAATTTTAC
TGCTCCAACGAAATTCTTTCTATCACAGCCCTGCTTTCCGTCCCGCAAGT
CTTCGTCAGACCTGCTTCTCAGCGGAAGCGTGCTGATGAGATGAAGGATC
TTTTTGCCCACCCTGACGGTGACCACCTTACCCTTCTCAATGTCTACCAT
GCTTTTAAGAGCCCTGAAGCGCAGGAGAACTTGAAGCAATGGTGTCACGA
CCACTTCCTCTCTCTTAGATCGCTGCAATCGGCAGACAACGTGCGCATGC
AGCTTCTGCGCATCATGGAACGTGAGGAACTCGAGATGGTGTCCACCCCC
TTCGAGGACAAGAAATATTACGAAAACATCCGCCGTGCGCTGTGCGCAGG
CTTCTTCATGCAGGTCGCCAAGAAGGAGACTCAGGGCAAGAACATGTATG
TCACGATCAAGGACAACCAGAACGTTCTTTTGCACCCCTCGACCGTCTTG
GGCCACGAAGCGGAATGGGTTCTCTACAACGAATTCGTCCTCACCACCAA
GAATTACATTCGGACTGTCACGGCTGTCAAGCCCGAATGGCTCATTGTAA
GTCTTACCCTGACCCTCAATCAAACACTCAGACTAGTACTAACATAGTGT
CTCCTAGGACATCGCACCCACTTACTACGACATCTCCGGCTTCCCCAAGG
GCGAGATCCGCTCCTCCCTCCTTCGCGCTGCTGAGAGACTTTCCCGCAAG
GAGAAGATGCGCTCTGATTCCAGCAGAAGACGATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4281240..4283675+

>ATCC64974_109350-T1 ID=ATCC64974_109350-T1|Name=ATCC64974_109350-T1|organism=Aspergillus niger N402|type=CDS|length=6921bp|location=Sequence derived from alignment at OGUI01000017.1:4281240..4283675+ (Aspergillus niger N402)
ATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCGCGTGCTAAACGTCA
AAAGATGGACAAGTCTGAAACCGATCCCAAGGACAATCCGTACCTGGCTC
ACATGTATGCGGACGGCAACTCCAACACAGGGACCGATGGCACCACAGAT
CTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAGACCACCGCTGCGAT
GGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTTCAACGGTCAACCTT
TCTCCAGCAAATATGTTTCCATCCTGCAGACTCGTCGCGACCTGCCCGTG
CATGCTCAGAGAGATGAATTCCTGGAGCTCTATCAAAAGTCGCAAATTCT
GGTCTTCGTTGGTGAAACTGGTTCCGGAAAGACCACGCAGATTCCCCAGT
TCGTCCTGTTCGATGACATGCCGCAAACTCAGCGCAAGATGGTCGCTTGT
ACCCAGCCTCGTCGTGTCGCCGCCATGTCCGTCGCTCAACGTGTCGCCGC
CGAGCTGGATGTCAAGCTTGGAGAGGAAGTTGGTTACAGCATCCGTTTCG
AAGATATGACCAGTTCCAAGACTGTGCTCAAGTACATGACGGACGGTATG
CTTCTGAGAGAAGCCATGAACGACCACAACCTCAACCGCTACAGTACCAT
CATTCTGGACGAAGCCCACGAGAGAACAATGGCCACTGATGTTCTCATGG
GTCTTCTCAAGGAAGTTGTTGTGCGCCGACCTGACCTGAAGATCATTATC
ATGTCTGCTACTCTGGATGCTCAGAAGTTCCAGCGTTACTTCAACGACGC
CCCTCTCCTTGCGGTTCCCGGTCGTACTCATCCTGTCGAGATCTTCTATA
CCCCTGAGCCTGAGCAGGATTATGTGGAAGCTGCCATTCGCACCGTCCTG
CAGATCCACGCGACAGAAGACGAAGGTGACATCCTTCTCTTCTTGACTGG
TGAAGAAGAAATCGAAGACGCCTCACGGAAGATCTCGTTAGAAGCCGATG
AGATGGTAAGAGAGGCCGATGCTGGTCCCATCAAGGTCTACCCTCTCTAC
GGTAGTCTGCCCCCGCATATGCAGCAGCGCATTTTCGAACCGGCACCCCC
TCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGAAGGTCATTGTATCCACCA
ACATCGCTGAAACTTCGCTTACCATCGACGGTATCGTCTACGTCGTCGAT
CCTGGCTTCTCGAAGCAGAAGATCTACAACCCCCGTATCCGTGTCGAGTC
TCTTCTGGTATCTCCCATCTCGAAGGCTTCCGCGCAACAGAGAGCTGGTC
GTGCTGGTCGTACGCGCCCCGGAAAGTGCTTCCGTCTGTACACTGAGGGG
GCTTTTAAGAAGGAACTCATCGACCAGACATACCCCGAGATTCTGCGCTC
GAACCTTTCTTCTACCGTGCTGGAATTGAAGAAGCTAGGCATTGATGATC
TTGTTCACTTCGATCTGATGGATCCTCCCGCTCCGGAGACTTTGATGAGA
GCTTTGGAAGAGCTCAACTATCTAGCTTGCTTGGACGATGATGGAAACCT
CACTCAGCTGGGACGCCTGGCCTCCGAGTTCCCCCTTGATCCCGCACTTG
CTGTGATGCTGATCAGCTCCCCCGAATTTTACTGCTCCAACGAAATTCTT
TCTATCACAGCCCTGCTTTCCGTCCCGCAAGTCTTCGTCAGACCTGCTTC
TCAGCGGAAGCGTGCTGATGAGATGAAGGATCTTTTTGCCCACCCTGACG
GTGACCACCTTACCCTTCTCAATGTCTACCATGCTTTTAAGAGCCCTGAA
GCGCAGGAGAACTTGAAGCAATGGTGTCACGACCACTTCCTCTCTCTTAG
ATCGCTGCAATCGGCAGACAACGTGCGCATGCAGCTTCTGCGCATCATGG
AACGTGAGGAACTCGAGATGGTGTCCACCCCCTTCGAGGACAAGAAATAT
TACGAAAACATCCGCCGTGCGCTGTGCGCAGGCTTCTTCATGCAGGTCGC
CAAGAAGGAGACTCAGGGCAAGAACATGTATGTCACGATCAAGGACAACC
AGAACGTTCTTTTGCACCCCTCGACCGTCTTGGGCCACGAAGCGGAATGG
GTTCTCTACAACGAATTCGTCCTCACCACCAAGAATTACATTCGGACTGT
CACGGCTGTCAAGCCCGAATGGCTCATTGACATCGCACCCACTTACTACG
ACATCTCCGGCTTCCCCAAGGGCGAGATCCGCTCCTCCCTCCTTCGCGCT
GCTGAGAGACTTTCCCGCAAGGAGAAGATGCGCTCTGATTCCAGCAGAAG
ACGATAGATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCGCGTGCTA
AACGTCAAAAGATGGACAAGTCTGAAACCGATCCCAAGGACAATCCGTAC
CTGGCTCACATGTATGCGGACGGCAACTCCAACACAGGGACCGATGGCAC
CACAGATCTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAGACCACCG
CTGCGATGGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTTCAACGGT
CAACCTTTCTCCAGCAAATATGTTTCCATCCTGCAGACTCGTCGCGACCT
GCCCGTGCATGCTCAGAGAGATGAATTCCTGGAGCTCTATCAAAAGTCGC
AAATTCTGGTCTTCGTTGGTGAAACTGGTTCCGGAAAGACCACGCAGATT
CCCCAGTTCGTCCTGTTCGATGACATGCCGCAAACTCAGCGCAAGATGGT
CGCTTGTACCCAGCCTCGTCGTGTCGCCGCCATGTCCGTCGCTCAACGTG
TCGCCGCCGAGCTGGATGTCAAGCTTGGAGAGGAAGTTGGTTACAGCATC
CGTTTCGAAGATATGACCAGTTCCAAGACTGTGCTCAAGTACATGACGGA
CGGTATGCTTCTGAGAGAAGCCATGAACGACCACAACCTCAACCGCTACA
GTACCATCATTCTGGACGAAGCCCACGAGAGAACAATGGCCACTGATGTT
CTCATGGGTCTTCTCAAGGAAGTTGTTGTGCGCCGACCTGACCTGAAGAT
CATTATCATGTCTGCTACTCTGGATGCTCAGAAGTTCCAGCGTTACTTCA
ACGACGCCCCTCTCCTTGCGGTTCCCGGTCGTACTCATCCTGTCGAGATC
TTCTATACCCCTGAGCCTGAGCAGGATTATGTGGAAGCTGCCATTCGCAC
CGTCCTGCAGATCCACGCGACAGAAGACGAAGGTGACATCCTTCTCTTCT
TGACTGGTGAAGAAGAAATCGAAGACGCCTCACGGAAGATCTCGTTAGAA
GCCGATGAGATGGTAAGAGAGGCCGATGCTGGTCCCATCAAGGTCTACCC
TCTCTACGGTAGTCTGCCCCCGCATATGCAGCAGCGCATTTTCGAACCGG
CACCCCCTCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGAAGGTCATTGTA
TCCACCAACATCGCTGAAACTTCGCTTACCATCGACGGTATCGTCTACGT
CGTCGATCCTGGCTTCTCGAAGCAGAAGATCTACAACCCCCGTATCCGTG
TCGAGTCTCTTCTGGTATCTCCCATCTCGAAGGCTTCCGCGCAACAGAGA
GCTGGTCGTGCTGGTCGTACGCGCCCCGGAAAGTGCTTCCGTCTGTACAC
TGAGGGGGCTTTTAAGAAGGAACTCATCGACCAGACATACCCCGAGATTC
TGCGCTCGAACCTTTCTTCTACCGTGCTGGAATTGAAGAAGCTAGGCATT
GATGATCTTGTTCACTTCGATCTGATGGATCCTCCCGCTCCGGAGACTTT
GATGAGAGCTTTGGAAGAGCTCAACTATCTAGCTTGCTTGGACGATGATG
GAAACCTCACTCAGCTGGGACGCCTGGCCTCCGAGTTCCCCCTTGATCCC
GCACTTGCTGTGATGCTGATCAGCTCCCCCGAATTTTACTGCTCCAACGA
AATTCTTTCTATCACAGCCCTGCTTTCCGTCCCGCAAGTCTTCGTCAGAC
CTGCTTCTCAGCGGAAGCGTGCTGATGAGATGAAGGATCTTTTTGCCCAC
CCTGACGGTGACCACCTTACCCTTCTCAATGTCTACCATGCTTTTAAGAG
CCCTGAAGCGCAGGAGAACTTGAAGCAATGGTGTCACGACCACTTCCTCT
CTCTTAGATCGCTGCAATCGGCAGACAACGTGCGCATGCAGCTTCTGCGC
ATCATGGAACGTGAGGAACTCGAGATGGTGTCCACCCCCTTCGAGGACAA
GAAATATTACGAAAACATCCGCCGTGCGCTGTGCGCAGGCTTCTTCATGC
AGGTCGCCAAGAAGGAGACTCAGGGCAAGAACATGTATGTCACGATCAAG
GACAACCAGAACGTTCTTTTGCACCCCTCGACCGTCTTGGGCCACGAAGC
GGAATGGGTTCTCTACAACGAATTCGTCCTCACCACCAAGAATTACATTC
GGACTGTCACGGCTGTCAAGCCCGAATGGCTCATTGACATCGCACCCACT
TACTACGACATCTCCGGCTTCCCCAAGGGCGAGATCCGCTCCTCCCTCCT
TCGCGCTGCTGAGAGACTTTCCCGCAAGGAGAAGATGCGCTCTGATTCCA
GCAGAAGACGATAGATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCG
CGTGCTAAACGTCAAAAGATGGACAAGTCTGAAACCGATCCCAAGGACAA
TCCGTACCTGGCTCACATGTATGCGGACGGCAACTCCAACACAGGGACCG
ATGGCACCACAGATCTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAG
ACCACCGCTGCGATGGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTT
CAACGGTCAACCTTTCTCCAGCAAATATGTTTCCATCCTGCAGACTCGTC
GCGACCTGCCCGTGCATGCTCAGAGAGATGAATTCCTGGAGCTCTATCAA
AAGTCGCAAATTCTGGTCTTCGTTGGTGAAACTGGTTCCGGAAAGACCAC
GCAGATTCCCCAGTTCGTCCTGTTCGATGACATGCCGCAAACTCAGCGCA
AGATGGTCGCTTGTACCCAGCCTCGTCGTGTCGCCGCCATGTCCGTCGCT
CAACGTGTCGCCGCCGAGCTGGATGTCAAGCTTGGAGAGGAAGTTGGTTA
CAGCATCCGTTTCGAAGATATGACCAGTTCCAAGACTGTGCTCAAGTACA
TGACGGACGGTATGCTTCTGAGAGAAGCCATGAACGACCACAACCTCAAC
CGCTACAGTACCATCATTCTGGACGAAGCCCACGAGAGAACAATGGCCAC
TGATGTTCTCATGGGTCTTCTCAAGGAAGTTGTTGTGCGCCGACCTGACC
TGAAGATCATTATCATGTCTGCTACTCTGGATGCTCAGAAGTTCCAGCGT
TACTTCAACGACGCCCCTCTCCTTGCGGTTCCCGGTCGTACTCATCCTGT
CGAGATCTTCTATACCCCTGAGCCTGAGCAGGATTATGTGGAAGCTGCCA
TTCGCACCGTCCTGCAGATCCACGCGACAGAAGACGAAGGTGACATCCTT
CTCTTCTTGACTGGTGAAGAAGAAATCGAAGACGCCTCACGGAAGATCTC
GTTAGAAGCCGATGAGATGGTAAGAGAGGCCGATGCTGGTCCCATCAAGG
TCTACCCTCTCTACGGTAGTCTGCCCCCGCATATGCAGCAGCGCATTTTC
GAACCGGCACCCCCTCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGAAGGT
CATTGTATCCACCAACATCGCTGAAACTTCGCTTACCATCGACGGTATCG
TCTACGTCGTCGATCCTGGCTTCTCGAAGCAGAAGATCTACAACCCCCGT
ATCCGTGTCGAGTCTCTTCTGGTATCTCCCATCTCGAAGGCTTCCGCGCA
ACAGAGAGCTGGTCGTGCTGGTCGTACGCGCCCCGGAAAGTGCTTCCGTC
TGTACACTGAGGGGGCTTTTAAGAAGGAACTCATCGACCAGACATACCCC
GAGATTCTGCGCTCGAACCTTTCTTCTACCGTGCTGGAATTGAAGAAGCT
AGGCATTGATGATCTTGTTCACTTCGATCTGATGGATCCTCCCGCTCCGG
AGACTTTGATGAGAGCTTTGGAAGAGCTCAACTATCTAGCTTGCTTGGAC
GATGATGGAAACCTCACTCAGCTGGGACGCCTGGCCTCCGAGTTCCCCCT
TGATCCCGCACTTGCTGTGATGCTGATCAGCTCCCCCGAATTTTACTGCT
CCAACGAAATTCTTTCTATCACAGCCCTGCTTTCCGTCCCGCAAGTCTTC
GTCAGACCTGCTTCTCAGCGGAAGCGTGCTGATGAGATGAAGGATCTTTT
TGCCCACCCTGACGGTGACCACCTTACCCTTCTCAATGTCTACCATGCTT
TTAAGAGCCCTGAAGCGCAGGAGAACTTGAAGCAATGGTGTCACGACCAC
TTCCTCTCTCTTAGATCGCTGCAATCGGCAGACAACGTGCGCATGCAGCT
TCTGCGCATCATGGAACGTGAGGAACTCGAGATGGTGTCCACCCCCTTCG
AGGACAAGAAATATTACGAAAACATCCGCCGTGCGCTGTGCGCAGGCTTC
TTCATGCAGGTCGCCAAGAAGGAGACTCAGGGCAAGAACATGTATGTCAC
GATCAAGGACAACCAGAACGTTCTTTTGCACCCCTCGACCGTCTTGGGCC
ACGAAGCGGAATGGGTTCTCTACAACGAATTCGTCCTCACCACCAAGAAT
TACATTCGGACTGTCACGGCTGTCAAGCCCGAATGGCTCATTGACATCGC
ACCCACTTACTACGACATCTCCGGCTTCCCCAAGGGCGAGATCCGCTCCT
CCCTCCTTCGCGCTGCTGAGAGACTTTCCCGCAAGGAGAAGATGCGCTCT
GATTCCAGCAGAAGACGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP43ATCC64974_109350Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109350-T1.exon1ATCC64974_109350-T1.exon1Aspergillus niger N402exon
ATCC64974_109350-T1.exon2ATCC64974_109350-T1.exon2Aspergillus niger N402exon
ATCC64974_109350-T1.exon3ATCC64974_109350-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109350-T1.cdsATCC64974_109350-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109350-T1ATCC64974_109350-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR011709
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR007502
DBxrefPFAM:PF07717
DBxrefPFAM:PF00271
DBxrefPFAM:PF04408
DBxrefPFAM:PF00270
ProductDEAH-box ATP-dependent RNA helicase prp43
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4281240..4283675 +
Powered by Drupal