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ATCC64974_109490-T1, ATCC64974_109490-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109490-T1
Unique NameATCC64974_109490-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4320414..4321484+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109490-T1 ID=ATCC64974_109490-T1|Name=ATCC64974_109490-T1|organism=Aspergillus niger N402|type=mRNA|length=1071bp|location=Sequence derived from alignment at OGUI01000017.1:4320414..4321484+ (Aspergillus niger N402)
ATGGCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAGACCTT
CACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGACCTGG
TTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGATTCAC
TCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGTGACTT
TACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGATCGCTG
GCCAGGTTGACTTTATTGTACACTCTCTCAAGGGTGCGTTTCCACTCGTT
CTTTATCTCGCTTAAAGTGACAAAAACTAACTTATCTCTATCATGATAGA
TGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGAAGC
GCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATACACA
AGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCATCCG
TCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGGATG
TGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGATGGC
CCTTTTACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGATCT
GGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAATGCTCT
ATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGACCAG
CAGGTGCTGCATATGCTACAGAACATCGGCCACAAGGAGACCACTTTTGC
TTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCAGTG
CGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGAGGATGCGG
TCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTGA
TGGGGCTGTTGATTCGCCCCAGGCTGCGGAAGAGTTTGGTGTTACGGTGG
CTAAGGCGTTGGTTGAGAAGGGCGCGGGCAAGATCCTGGAGGAAATCCAG
CGCAACAAGCAGACTGCTTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:4320414..4321484+

>ATCC64974_109490-T1 ID=ATCC64974_109490-T1|Name=ATCC64974_109490-T1|organism=Aspergillus niger N402|type=CDS|length=2010bp|location=Sequence derived from alignment at OGUI01000017.1:4320414..4321484+ (Aspergillus niger N402)
ATGGCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAGACCTT
CACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGACCTGG
TTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGATTCAC
TCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGTGACTT
TACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGATCGCTG
GCCAGGTTGACTTTATTGTACACTCTCTCAAGGATGTGCCGACTCTTCTC
CCCTCCTCCTGCACCCTCGGCCCTATGATGAAGCGCGAAGACACAAGAGA
CGTCCTGGTCATGAAGAAGGGCCTTTCATACACAAGTCTGGCCGAGCTGC
CAGAAGGCTCCGTCGTCGGCACTTCATCCATCCGTCGGACCGCCCAACTC
GCCCGTCGCTACCCCCACCTCAAAGTTATGGATGTGCGCGGTAACATTGG
CACTCGGTTGTCGAAGCTAGATGCAGAGGATGGCCCTTTTACGTGCCTCA
TCCTGGCTGCTGCTGGTTTGCTGAGATTGGATCTGGGCGATCGTATCACC
AGCTATCTGGATTCGAAGAACGGAGGAATGCTCTATGCTGTCGGTCAGGG
TGCTCTCGGCATTGAGATCCGGAAGGATGACCAGCAGGTGCTGCATATGC
TACAGAACATCGGCCACAAGGAGACCACTTTTGCTTGCTTGGCAGAGCGG
AGCCTCCTGCGTACCCTTGAAGGTGGATGCAGTGCGCCGTTGGGTGTTGA
GTCCGAATGGGTTAATGGTGCTTTGAGGATGCGGTCCATTGTGGTTAGTG
TGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTGATGGGGCTGTTGATTCG
CCCCAGGCTGCGGAAGAGTTTGGTGTTACGGTGGCTAAGGCGTTGGTTGA
GAAGGGCGCGGGCAAGATCCTGGAGGAAATCCAGCGCAACAAGCAGACTG
CTTAGATGGCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAG
ACCTTCACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGA
CCTGGTTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGA
TTCACTCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGT
GACTTTACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGAT
CGCTGGCCAGGTTGACTTTATTGTACACTCTCTCAAGGATGTGCCGACTC
TTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGAAGCGCGAAGACACA
AGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATACACAAGTCTGGCCGA
GCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCATCCGTCGGACCGCCC
AACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGGATGTGCGCGGTAAC
ATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGATGGCCCTTTTACGTG
CCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGATCTGGGCGATCGTA
TCACCAGCTATCTGGATTCGAAGAACGGAGGAATGCTCTATGCTGTCGGT
CAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGACCAGCAGGTGCTGCA
TATGCTACAGAACATCGGCCACAAGGAGACCACTTTTGCTTGCTTGGCAG
AGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCAGTGCGCCGTTGGGT
GTTGAGTCCGAATGGGTTAATGGTGCTTTGAGGATGCGGTCCATTGTGGT
TAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTGATGGGGCTGTTG
ATTCGCCCCAGGCTGCGGAAGAGTTTGGTGTTACGGTGGCTAAGGCGTTG
GTTGAGAAGGGCGCGGGCAAGATCCTGGAGGAAATCCAGCGCAACAAGCA
GACTGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0018160peptidyl-pyrromethane cofactor linkage
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004418hydroxymethylbilane synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_109490ATCC64974_109490Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109490-T1.exon1ATCC64974_109490-T1.exon1Aspergillus niger N402exon
ATCC64974_109490-T1.exon2ATCC64974_109490-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109490-T1.cdsATCC64974_109490-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109490-T1ATCC64974_109490-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262YP5
DBxrefInterPro:IPR022419
DBxrefInterPro:IPR036803
DBxrefInterPro:IPR022417
DBxrefInterPro:IPR022418
DBxrefInterPro:IPR000860
DBxrefPFAM:PF03900
DBxrefPFAM:PF01379
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4320414..4321484 +
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