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ATCC64974_110110-T1, ATCC64974_110110-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_110110-T1
Unique NameATCC64974_110110-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4548322..4549092-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_110110-T1 ID=ATCC64974_110110-T1|Name=ATCC64974_110110-T1|organism=Aspergillus niger N402|type=mRNA|length=771bp|location=Sequence derived from alignment at OGUI01000017.1:4548322..4549092- (Aspergillus niger N402)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTGTATGTCGATCACCC
TCACTTTCTGGGGTAGTTCACATTCCCGGAAGTATTCTGACCCTTCTCTG
ACTATTATGACCAAAATCATTAGATACCCAACTGGCCGATCGCACGGTTC
ACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCG
CAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCAAAACGCCGAC
AGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTCCTAGCAACAC
GTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAG
CTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCA
GGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCTCATCTTCAAC
TACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTG
GAGGTTTGCTGCTCCGTTACCTCCTTTTGTGACTCCTTCTGCTGTTGCTG
ACACCACTTTAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACT
GAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGATC
TCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAAC
GCTGCCTCTGAGTTCTCATAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:4548322..4549092-

>ATCC64974_110110-T1 ID=ATCC64974_110110-T1|Name=ATCC64974_110110-T1|organism=Aspergillus niger N402|type=CDS|length=1872bp|location=Sequence derived from alignment at OGUI01000017.1:4548322..4549092- (Aspergillus niger N402)
GATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGA
AGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCT
GGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAG
TTCTCATAGATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACG
GCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACC
CGACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCAC
AAGACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCA
GAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGAC
CACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGA
TCCGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGAT
CGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGATGGCCCACTG
GAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAG
CCAGCATAGCTATCTACGATGCTTGATTTCCAAGACGAGCTGGCATCGTT
GAATCTTCAACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAG
AGAACCAAGATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCA
GAAGCCATGAACGCTGCCTCTGAGTTCTCATAGATACCCAACTGGCCGAT
CGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCC
GGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCA
AAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTC
CTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACT
GCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGA
GAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCT
CATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGC
AAAGCTACTGGAGATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGG
CGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTGA
TTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAG
AACGGTCATCCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGG
ATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTT
CTCATAGATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACGGC
TAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACCCG
ACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCACAA
GACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCAGA
GGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGACCA
CTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGATC
CGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGATCG
AGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGATGGCCCACTGGA
AAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCC
AGCATAGCTATCTACGATGCTT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG16ATCC64974_110110Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110110-T1ATCC64974_110110-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110110-T1.cdsATCC64974_110110-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110110-T1.exon3ATCC64974_110110-T1.exon3Aspergillus niger N402exon
ATCC64974_110110-T1.exon2ATCC64974_110110-T1.exon2Aspergillus niger N402exon
ATCC64974_110110-T1.exon1ATCC64974_110110-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR013923
DBxrefPFAM:PF08614
Product interacts with Atg12p-Atg5p
Productautophagy protein 16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4548322..4549092 -
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