You are here

Home

ATCC64974_110230-T1, ATCC64974_110230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_110230-T1
Unique NameATCC64974_110230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4587312..4587790+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_110230-T1 ID=ATCC64974_110230-T1|Name=ATCC64974_110230-T1|organism=Aspergillus niger N402|type=mRNA|length=479bp|location=Sequence derived from alignment at OGUI01000017.1:4587312..4587790+ (Aspergillus niger N402)
ATGTCCGAATCCACCGCCGAAGCCGTCCCTCCCCCACCAACAACCTCAAC
TCAAGTACGCCCCATCCCTGCTACTTAGTACCCGATGGAAAAAGATACCC
ACGAACGAAACAGCGCAGCTAACAGCCTTACCTTGATGTTAGAACTCCGA
CGCGCAAGGCCAATTCTCCGCCGCAGTGGACGATCTTCTCGACCAGCTAC
AACATAAATTCGATGGTGTTTCGCGGGAGATGTTTGGGAAGTGTACGTCT
TTATCCTTCCTTCTTATACTTGTTGATCTGAGAGAAGTGAGCGCTGATAT
TTATGGGTATCTGGACAGTGGACGATATGGCGAGACGGTTGGATGAGTTA
GAGGCTTCGTTTACGGTTGTGGATGGGACGACGACGTCCGGGGCTGGTGG
TGGTGGTGCTTCTGCGTCGCAGACGGGGACGGGGTCGGTGGTGGGGAGTG
CGGCTGGGAGTGGGAGTCCTGAGAAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4587312..4587790+

>ATCC64974_110230-T1 ID=ATCC64974_110230-T1|Name=ATCC64974_110230-T1|organism=Aspergillus niger N402|type=CDS|length=945bp|location=Sequence derived from alignment at OGUI01000017.1:4587312..4587790+ (Aspergillus niger N402)
ATGTCCGAATCCACCGCCGAAGCCGTCCCTCCCCCACCAACAACCTCAAC
TCAAAACTCCGACGCGCAAGGCCAATTCTCCGCCGCAGTGGACGATCTTC
TCGACCAGCTACAACATAAATTCGATGGTGTTTCGCGGGAGATGTTTGGG
AAGTTGGACGATATGGCGAGACGGTTGGATGAGTTAGAGGCTTCGTTTAC
GGTTGTGGATGGGACGACGACGTCCGGGGCTGGTGGTGGTGGTGCTTCTG
CGTCGCAGACGGGGACGGGGTCGGTGGTGGGGAGTGCGGCTGGGAGTGGG
AGTCCTGAGAAGTGAATGTCCGAATCCACCGCCGAAGCCGTCCCTCCCCC
ACCAACAACCTCAACTCAAAACTCCGACGCGCAAGGCCAATTCTCCGCCG
CAGTGGACGATCTTCTCGACCAGCTACAACATAAATTCGATGGTGTTTCG
CGGGAGATGTTTGGGAAGTTGGACGATATGGCGAGACGGTTGGATGAGTT
AGAGGCTTCGTTTACGGTTGTGGATGGGACGACGACGTCCGGGGCTGGTG
GTGGTGGTGCTTCTGCGTCGCAGACGGGGACGGGGTCGGTGGTGGGGAGT
GCGGCTGGGAGTGGGAGTCCTGAGAAGTGAATGTCCGAATCCACCGCCGA
AGCCGTCCCTCCCCCACCAACAACCTCAACTCAAAACTCCGACGCGCAAG
GCCAATTCTCCGCCGCAGTGGACGATCTTCTCGACCAGCTACAACATAAA
TTCGATGGTGTTTCGCGGGAGATGTTTGGGAAGTTGGACGATATGGCGAG
ACGGTTGGATGAGTTAGAGGCTTCGTTTACGGTTGTGGATGGGACGACGA
CGTCCGGGGCTGGTGGTGGTGGTGCTTCTGCGTCGCAGACGGGGACGGGG
TCGGTGGTGGGGAGTGCGGCTGGGAGTGGGAGTCCTGAGAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003714transcription corepressor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_110230ATCC64974_110230Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110230-T1.exon1ATCC64974_110230-T1.exon1Aspergillus niger N402exon
ATCC64974_110230-T1.exon2ATCC64974_110230-T1.exon2Aspergillus niger N402exon
ATCC64974_110230-T1.exon3ATCC64974_110230-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110230-T1.cdsATCC64974_110230-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110230-T1ATCC64974_110230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009643
DBxrefPFAM:PF06825
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4587312..4587790 +
Powered by Drupal