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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4595354..4596725+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_110270-T1 ID=ATCC64974_110270-T1|Name=ATCC64974_110270-T1|organism=Aspergillus niger N402|type=mRNA|length=1372bp|location=Sequence derived from alignment at OGUI01000017.1:4595354..4596725+ (Aspergillus niger N402)
ATGAGCGCACAATCCCCGCAGGTGCGGCAACCACCGGCAACCCCCACTTA
CATTTTACGCGGTCATGCCGCTGCCATCCACGCGCTACAGATATTCCACC
AAAACCTAAGGCTCGTTTCAGGAGACGCAGACGGATGGATTGTCGTATGG
GACCTAGTCTCAAAGCGCCCTCGAGCGACATGGAAGGCCCATGACGGCGC
TGTTCTTGAAGTCAAAGGTTTTAGCTTCGGAAATGGTGCTGTTACAGAGG
TGTTCACGTGTGTTAACTCTCCATCATTCTCAAGGGCCATCTAACAGTGT
CTACAGGCATGGAAGAGACCATAAACTGCGCGTATGGAGGTTCAGCCTTC
AGGATGAGGAGTCTCTTCAGAAAGTCCTCCCCGTGGACATCGAGAAAACC
TCATCGACTGCCGCAAGCCAGCCATGGCTCGTACATTCGCTTCCGGTGAA
TGCGCTGAATTTCTGCGCGTTCTCCATGGTTTTCCTTCCTCCGGATAAAG
CAAATACTGCAAGCGATGCCAGTGAGGCCCCGAAAGAAAACACCTCTCTT
TCATCAGTGCTTATCGCCGTCCCTAATGCTCTGAACTCTGGCGCGATCGA
TCTCTTTCATCTCCCCCAGGAGAGACGTATCTGCACCATTCCGGCGGATA
CGGAAGTGCAAACTGGAATGGTTATGGCGGCTAACCTCGTCATATCTCCA
TCTGGGGAGTTGTATGTTGCTTCCGCTTACGAAGACGGTCGAGTTATGGT
CCATGGCTGCAGGGGATCGTTACAGGAAAAAGACCTGACGCAGAGTACCA
AAACGCCATGGAAATGGGAGAAGCTGTACGTTTGTCGGGCTCACTCACAA
CCGGTTCTGTCGCTTCACGTTTCGCCTGCTGGCAATTACTTCTTCTCTTC
ATCAGCCGATGCGGTGCTGGCGAAGCATCCTATTCCTTCGCTGGGTAGCC
CAGGACATGCCCCGGAAGAGTTGCCGATCAGGTCGATTAACACGAAGCAT
GCGGGCCAGCAAGGTGTGCGGATACGGTCTGATGGGAAGATTTTCGCGAC
TGCCGGGTGGGACTCCAGGGTCAGGGTCTACTCGTGCAAGACGATGAAAG
AACTAGCCGTCTTGAAGTGGCATAAAGATGGATGCTACGCTGTAGCGTTT
GCGGATGTTGATGTATTTGAAGTACGCGAGAAATCGGATGAGGAGAAGCC
TACGGTTTCGCCTAACGACAATGGCAATCAAGAAAACCAGCTTGCCGGAC
GGGCAGAAACTGAATTCTCGCTTGCAACAGTGCATCGCCAAAGATCCGAG
AAGGTGCAAAACACCCATTGGTTAGCTGCTGGGTCAAAGGACGGAAAAAT
CTCATTGTGGGATATCTATTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4595354..4596725+ >ATCC64974_110270-T1 ID=ATCC64974_110270-T1|Name=ATCC64974_110270-T1|organism=Aspergillus niger N402|type=CDS|length=2646bp|location=Sequence derived from alignment at OGUI01000017.1:4595354..4596725+ (Aspergillus niger N402)
ATGAGCGCACAATCCCCGCAGGTGCGGCAACCACCGGCAACCCCCACTTA
CATTTTACGCGGTCATGCCGCTGCCATCCACGCGCTACAGATATTCCACC
AAAACCTAAGGCTCGTTTCAGGAGACGCAGACGGATGGATTGTCGTATGG
GACCTAGTCTCAAAGCGCCCTCGAGCGACATGGAAGGCCCATGACGGCGC
TGTTCTTGAAGTCAAAGGTTTTAGCTTCGGAAATGGTGCTGTTACAGAGG
TGTTCACGCATGGAAGAGACCATAAACTGCGCGTATGGAGGTTCAGCCTT
CAGGATGAGGAGTCTCTTCAGAAAGTCCTCCCCGTGGACATCGAGAAAAC
CTCATCGACTGCCGCAAGCCAGCCATGGCTCGTACATTCGCTTCCGGTGA
ATGCGCTGAATTTCTGCGCGTTCTCCATGGTTTTCCTTCCTCCGGATAAA
GCAAATACTGCAAGCGATGCCAGTGAGGCCCCGAAAGAAAACACCTCTCT
TTCATCAGTGCTTATCGCCGTCCCTAATGCTCTGAACTCTGGCGCGATCG
ATCTCTTTCATCTCCCCCAGGAGAGACGTATCTGCACCATTCCGGCGGAT
ACGGAAGTGCAAACTGGAATGGTTATGGCGGCTAACCTCGTCATATCTCC
ATCTGGGGAGTTGTATGTTGCTTCCGCTTACGAAGACGGTCGAGTTATGG
TCCATGGCTGCAGGGGATCGTTACAGGAAAAAGACCTGACGCAGAGTACC
AAAACGCCATGGAAATGGGAGAAGCTGTACGTTTGTCGGGCTCACTCACA
ACCGGTTCTGTCGCTTCACGTTTCGCCTGCTGGCAATTACTTCTTCTCTT
CATCAGCCGATGCGGTGCTGGCGAAGCATCCTATTCCTTCGCTGGGTAGC
CCAGGACATGCCCCGGAAGAGTTGCCGATCAGGTCGATTAACACGAAGCA
TGCGGGCCAGCAAGGTGTGCGGATACGGTCTGATGGGAAGATTTTCGCGA
CTGCCGGGTGGGACTCCAGGGTCAGGGTCTACTCGTGCAAGACGATGAAA
GAACTAGCCGTCTTGAAGTGGCATAAAGATGGATGCTACGCTGTAGCGTT
TGCGGATGTTGATGTATTTGAAGTACGCGAGAAATCGGATGAGGAGAAGC
CTACGGTTTCGCCTAACGACAATGGCAATCAAGAAAACCAGCTTGCCGGA
CGGGCAGAAACTGAATTCTCGCTTGCAACAGTGCATCGCCAAAGATCCGA
GAAGGTGCAAAACACCCATTGGTTAGCTGCTGGGTCAAAGGACGGAAAAA
TCTCATTGTGGGATATCTATTGAATGAGCGCACAATCCCCGCAGGTGCGG
CAACCACCGGCAACCCCCACTTACATTTTACGCGGTCATGCCGCTGCCAT
CCACGCGCTACAGATATTCCACCAAAACCTAAGGCTCGTTTCAGGAGACG
CAGACGGATGGATTGTCGTATGGGACCTAGTCTCAAAGCGCCCTCGAGCG
ACATGGAAGGCCCATGACGGCGCTGTTCTTGAAGTCAAAGGTTTTAGCTT
CGGAAATGGTGCTGTTACAGAGGTGTTCACGCATGGAAGAGACCATAAAC
TGCGCGTATGGAGGTTCAGCCTTCAGGATGAGGAGTCTCTTCAGAAAGTC
CTCCCCGTGGACATCGAGAAAACCTCATCGACTGCCGCAAGCCAGCCATG
GCTCGTACATTCGCTTCCGGTGAATGCGCTGAATTTCTGCGCGTTCTCCA
TGGTTTTCCTTCCTCCGGATAAAGCAAATACTGCAAGCGATGCCAGTGAG
GCCCCGAAAGAAAACACCTCTCTTTCATCAGTGCTTATCGCCGTCCCTAA
TGCTCTGAACTCTGGCGCGATCGATCTCTTTCATCTCCCCCAGGAGAGAC
GTATCTGCACCATTCCGGCGGATACGGAAGTGCAAACTGGAATGGTTATG
GCGGCTAACCTCGTCATATCTCCATCTGGGGAGTTGTATGTTGCTTCCGC
TTACGAAGACGGTCGAGTTATGGTCCATGGCTGCAGGGGATCGTTACAGG
AAAAAGACCTGACGCAGAGTACCAAAACGCCATGGAAATGGGAGAAGCTG
TACGTTTGTCGGGCTCACTCACAACCGGTTCTGTCGCTTCACGTTTCGCC
TGCTGGCAATTACTTCTTCTCTTCATCAGCCGATGCGGTGCTGGCGAAGC
ATCCTATTCCTTCGCTGGGTAGCCCAGGACATGCCCCGGAAGAGTTGCCG
ATCAGGTCGATTAACACGAAGCATGCGGGCCAGCAAGGTGTGCGGATACG
GTCTGATGGGAAGATTTTCGCGACTGCCGGGTGGGACTCCAGGGTCAGGG
TCTACTCGTGCAAGACGATGAAAGAACTAGCCGTCTTGAAGTGGCATAAA
GATGGATGCTACGCTGTAGCGTTTGCGGATGTTGATGTATTTGAAGTACG
CGAGAAATCGGATGAGGAGAAGCCTACGGTTTCGCCTAACGACAATGGCA
ATCAAGAAAACCAGCTTGCCGGACGGGCAGAAACTGAATTCTCGCTTGCA
ACAGTGCATCGCCAAAGATCCGAGAAGGTGCAAAACACCCATTGGTTAGC
TGCTGGGTCAAAGGACGGAAAAATCTCATTGTGGGATATCTATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_110270-T1 | ATCC64974_110270-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | ASTRA complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4595354..4596725 + |
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