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ATCC64974_110540-T1, ATCC64974_110540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_110540-T1
Unique NameATCC64974_110540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4677288..4679330+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_110540-T1 ID=ATCC64974_110540-T1|Name=ATCC64974_110540-T1|organism=Aspergillus niger N402|type=mRNA|length=2043bp|location=Sequence derived from alignment at OGUI01000017.1:4677288..4679330+ (Aspergillus niger N402)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGACGTG
CCGAGATCTTGCAGTTCGCTATGTAAGTAGGTGGTCTGCTGGTAGCAATG
GTGGACAATTGCGCTAATTGATTTGTTGCGGGTTGAAGGCAGGCGCATAT
GGAAGCTCTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATA
CCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCG
CCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGA
GGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGA
ACTTCAATGCCGCTGCGAATAAATTGCTCAATTCGGCGACGCGATTGGAA
GAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTACTGGCGGTTAA
GGAGAAGGGTTGGAAGGTGTGCAGGTTGCCCCGGGAGAGAACTGCGCTGG
GAGTACAATATGGGTTCTTGGAAGGTAGGATGGCTACGTGCTTCTGCTGG
ACTGATGCTGACTGTGTTCCTATAGCTACGCCTATATTCCGCGACCGGGG
TCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAGG
GACTGGCACCACAGAAGACGAGGACGGTTCGAGTGCGTGTGAAGCACCGC
GGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAGC
GTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAGG
AGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGGT
GTGACGACTCGCCAAAACCTGGTCCGACTGCCGATATCCGAGGACCAAGA
GATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGACA
AGATCGAGTCAACAGAACACGACGTCCTTGCTAATGGGCTTTCACACTCA
ATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAAC
CCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATC
AGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCGG
TGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAGG
GATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGA
AGGTGCGGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATG
CCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTT
TCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCACT
ACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGT
CGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAA
GTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAA
ATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCA
TATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAA
GAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTTT
CACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCA
AGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTGG
TCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:4677288..4679330+

>ATCC64974_110540-T1 ID=ATCC64974_110540-T1|Name=ATCC64974_110540-T1|organism=Aspergillus niger N402|type=CDS|length=5778bp|location=Sequence derived from alignment at OGUI01000017.1:4677288..4679330+ (Aspergillus niger N402)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGACGTG
CCGAGATCTTGCAGTTCGCTATGCAGGCGCATATGGAAGCTCTGTTCGCT
TTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCGGA
GACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTTGA
ATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGGAT
GTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCTGC
GAATAAATTGCTCAATTCGGCGACGCGATTGGAAGAAGAGGTCGCTTCGG
AGACGAAGTACTGGGATGAAGTACTGGCGGTTAAGGAGAAGGGTTGGAAG
GTGTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGGTT
CTTGGAAGCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACGGA
GGGCTGATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGAAG
ACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGATG
CTCTAAAATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAGGA
TTTTGCAAGCACGCGACACAGTGTACGAGGAGGAGCTATTCCACGAGTTG
ATGCGCGAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGCCAAAA
CCTGGTCCGACTGCCGATATCCGAGGACCAAGAGATCCTGCTGGATCTGG
TAGATGCGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAGAA
CACGACGTCCTTGCTAATGGGCTTTCACACTCAATTCGGATCCTGCTCGC
GTATGCACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCCGC
TCTCCCAGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTGTC
ATGGCGTATCTCCAACACAGCTCGCACGTCCGGTGGTTGGAGTCTTTCAT
GAATGATATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTTCC
ACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCGGGCTGTTCCG
AAGGTAGAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACATT
TTCCGGCCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCGCA
CCAACCCGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTGAC
CTACCTCACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAGAA
TGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTCGG
CCATCGCGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAGAA
GGCGCCGAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGCGA
ACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAGCC
TGTCACGGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTGAA
GGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAGAC
GTGGACAGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGTCG
CGGAGGTTTCGCGGGAGCAGTCATAAATGTCCGACTCATTCAGCCTCCCC
CTGCGCCCGCTCACCGAGAAGCCCGACCGCCCCGATACCCTTCCAATCGA
GATCGCCCAAATCAACGCCCGATGGGGATCTTTCCGCGACGTGAACGAAG
AGACACTGCTCGCCAAGATCGAAGAGGACAAGAACCGGGACCCATGGGAA
GAGGAAGATGAGGACGAAAAACTTGCTGAGGATGTGGACTCAACCGAGCG
TCTGGAAACATTGTACAAGCGACGTGCCGAGATCTTGCAGTTCGCTATGC
AGGCGCATATGGAAGCTCTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTT
TCGAAGCATACCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAA
ACAGGTTGCGCCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGC
CGAAGTCGGAGGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGG
AGGGCGCAGAACTTCAATGCCGCTGCGAATAAATTGCTCAATTCGGCGAC
GCGATTGGAAGAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTAC
TGGCGGTTAAGGAGAAGGGTTGGAAGGTGTGCAGGTTGCCCCGGGAGAGA
ACTGCGCTGGGAGTACAATATGGGTTCTTGGAAGCTACGCCTATATTCCG
CGACCGGGGTCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATAC
TGGATAAGGGACTGGCACCACAGAAGACGAGGACGGTTCGAGTGCGTGTG
AAGCACCGCGGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCC
CGATGCAGCGTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGT
ACGAGGAGGAGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGA
AGTCATGGTGTGACGACTCGCCAAAACCTGGTCCGACTGCCGATATCCGA
GGACCAAGAGATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCG
ACGAAGACAAGATCGAGTCAACAGAACACGACGTCCTTGCTAATGGGCTT
TCACACTCAATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCG
ACGCAGAACCCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCC
CCGAGTATCAGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCG
CACGTCCGGTGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCG
GGCGGCAGGGATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGA
GCCTTCCGAAGGTGCGGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAG
TTCCTGATGCCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCA
AAGCTCTTTTCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTG
GCACCCACTACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAG
CCTCCCGGTCGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCA
TTTCGTCAAGTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGA
CGACCAAAAATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGG
GAGGCGGCATATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGG
CCAAAGCAAGAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGG
AAACATTTTCACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCC
AAGGCACCAAGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTC
TAAGCCTGGTCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCAT
AAATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCC
GACCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATG
GGGATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAG
AGGACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTT
GCTGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGACG
TGCCGAGATCTTGCAGTTCGCTATGCAGGCGCATATGGAAGCTCTGTTCG
CTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCG
GAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTT
GAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGG
ATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCT
GCGAATAAATTGCTCAATTCGGCGACGCGATTGGAAGAAGAGGTCGCTTC
GGAGACGAAGTACTGGGATGAAGTACTGGCGGTTAAGGAGAAGGGTTGGA
AGGTGTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGG
TTCTTGGAAGCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACG
GAGGGCTGATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGA
AGACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGA
TGCTCTAAAATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAG
GATTTTGCAAGCACGCGACACAGTGTACGAGGAGGAGCTATTCCACGAGT
TGATGCGCGAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGCCAA
AACCTGGTCCGACTGCCGATATCCGAGGACCAAGAGATCCTGCTGGATCT
GGTAGATGCGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAG
AACACGACGTCCTTGCTAATGGGCTTTCACACTCAATTCGGATCCTGCTC
GCGTATGCACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCC
GCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTG
TCATGGCGTATCTCCAACACAGCTCGCACGTCCGGTGGTTGGAGTCTTTC
ATGAATGATATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTT
CCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCGGGCTGTTC
CGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACA
TTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCG
CACCAACCCGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTG
ACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAG
AATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTC
GGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAG
AAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGC
GAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAG
CCTGTCACGGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTG
AAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAG
ACGTGGACAGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGT
CGCGGAGGTTTCGCGGGAGCAGTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SRB4ATCC64974_110540Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110540-T1.exon1ATCC64974_110540-T1.exon1Aspergillus niger N402exon
ATCC64974_110540-T1.exon2ATCC64974_110540-T1.exon2Aspergillus niger N402exon
ATCC64974_110540-T1.exon3ATCC64974_110540-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110540-T1.cdsATCC64974_110540-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110540-T1ATCC64974_110540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019313
DBxrefPFAM:PF10156
ProductRNA polymerase II mediator complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4677288..4679330 +
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