|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4785621..4787403- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_110950-T1 ID=ATCC64974_110950-T1|Name=ATCC64974_110950-T1|organism=Aspergillus niger N402|type=mRNA|length=1783bp|location=Sequence derived from alignment at OGUI01000017.1:4785621..4787403- (Aspergillus niger N402)
ATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTCCCTACGGA
TGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGTCTGTCA
TACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTGGTGCTGGA
TTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTCCCAAGC
AGAGGTAACCCAGCTACTCACGGTACGCAATTCATATAACCTGGAAACCC
ACGGGTATAAGCAGAGTCTGCTGACTTATTCTGGGTAGCTTAACTTTCTG
TTCCTGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGGTCAAGTTTGG
CAAACGTGCATCAATTATATCCTCGATGTTGCTTCAGGCAGGGGCCCTGG
TGTGGTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGGCGCAAGATGC
GTTCTTGGATTTGCTGCTGCTGCTGGCGAAGTAAGAAGCCGCTCCCATAA
AGATTCACCTAGTCTTATCACCTGGATACGCCGAATTGACGTTGGATGTT
CTATAGAGTATCGTACCCGAGATCGTTGCTGATATATTCTTCGTCCACGA
GCGTGCTACGATGATGGCAATGTGAGATTTTGGACCCTTTCATAGTACAC
CACCTGTTGAGACTTTTCCTGATTTGATATAGCTATGTTGTCTTGATCTC
TGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATGGTAGAGTACG
CCTCGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGCGCTCGCCAGT
TTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGACCTTCAAGCG
ACCGGAACCTTCTCAGGCACAGGAGTTACAGCCCGTCGCAGAACACAAAG
AGACTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGCTCCAGAGGAC
TCCTATACCACCAACACGCCCCCATTTAAGGGTGTCCTTCGGCCGTTCCA
TTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCGCCTCTCAAGC
TGTTGGTTCATCCGTCGGTCTGTTGGGGCATCTTTACCTACGGCATATCG
CTAAGTCCGCAAATCATTATGATGTACGTGCTCCTATGAGAAACTCTGTC
GCGGAAAAAGACCAGCGCCCGTGCTAATAACAGATAAATCATAATAGCTT
TAACTTCTCCGCTCTCCTAGAAGCGCCGCCATACTTCTTCCGCTCCGAGT
ATGTCGGTCTCATGGAAATCGCCGCTATTGTGGGATTCCTACTAGCATGC
TACGGCGGTGGCTACCTATCCGATACCGTAAACAGAATTATTGCCCAACG
CAGCAGCAGTAGCAGCATCCGCCCCGAACAACGCCTCATCTCTCTCATCC
CAGGAATGGCCATCGGGCCGGCAGGCTGTATCCTGCTCGCGTTTGCCTGC
GGCCACAAACTCCACTGGGCCGCCATCGCGGTTGGCTTCGGAATGGTCTC
GTTTGGGACCGCGTATACACCCAACATCGCTCTTACGTACATCGTGCACT
TGCATCAACAAGATGCCGCGAACTGCCTTGTCTCAATTAGCTTGGTCAAA
AACCTGGTGGCATTCACGTTTCTGTATGTTGCTGTGGACTGGGTTGAGAG
GGAGGGTTACGTGCAGGTTTTTATGATTATGTTTATGTTGAATGTTTTGG
CTCTTCTCTGTGCGGTCCCGTTGTACTTTTTGGGACGGAGGAAGGACTTG
AACGTATATAATGGGATGGAGGGGCGTGCGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4785621..4787403- >ATCC64974_110950-T1 ID=ATCC64974_110950-T1|Name=ATCC64974_110950-T1|organism=Aspergillus niger N402|type=CDS|length=7530bp|location=Sequence derived from alignment at OGUI01000017.1:4785621..4787403- (Aspergillus niger N402)
CTTTAACTTCTCCGCTCTCCTAGAAGCGCCGCCATACTTCTTCCGCTCCG
AGTATGTCGGTCTCATGGAAATCGCCGCTATTGTGGGATTCCTACTAGCA
TGCTACGGCGGTGGCTACCTATCCGATACCGTAAACAGAATTATTGCCCA
ACGCAGCAGCAGTAGCAGCATCCGCCCCGAACAACGCCTCATCTCTCTCA
TCCCAGGAATGGCCATCGGGCCGGCAGGCTGTATCCTGCTCGCGTTTGCC
TGCGGCCACAAACTCCACTGGGCCGCCATCGCGGTTGGCTTCGGAATGGT
CTCGTTTGGGACCGCGTATACACCCAACATCGCTCTTACGTACATCGTGC
ACTTGCATCAACAAGATGCCGCGAACTGCCTTGTCTCAATTAGCTTGGTC
AAAAACCTGGTGGCATTCACGTTTCTGTATGTTGCTGTGGACTGGGTTGA
GAGGGAGGGTTACGTGCAGGTTTTTATGATTATGTTTATGTTGAATGTTT
TGGCTCTTCTCTGTGCGGTCCCGTTGTACTTTTTGGGACGGAGGAAGGAC
TTGAACGTATATAATGGGATGGAGGGGCGTGCGTAACTATGTTGTCTTGA
TCTCTGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATGGTAGAG
TACGCCTCGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGCGCTCGC
CAGTTTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGACCTTCA
AGCGACCGGAACCTTCTCAGGCACAGGAGTTACAGCCCGTCGCAGAACAC
AAAGAGACTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGCTCCAGA
GGACTCCTATACCACCAACACGCCCCCATTTAAGGGTGTCCTTCGGCCGT
TCCATTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCGCCTCTC
AAGCTGTTGGTTCATCCGTCGGTCTGTTGGGGCATCTTTACCTACGGCAT
ATCGCTAAGTCCGCAAATCATTATGATAGTATCGTACCCGAGATCGTTGC
TGATATATTCTTCGTCCACGAGCGTGCTACGATGATGGCAATCTTAACTT
TCTGTTCCTGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGGTCAAGT
TTGGCAAACGTGCATCAATTATATCCTCGATGTTGCTTCAGGCAGGGGCC
CTGGTGTGGTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGGCGCAAG
ATGCGTTCTTGGATTTGCTGCTGCTGCTGGCGAAATGCCTACCCTGAGCC
ATCGGGGTCTTCAATTGATCCCAGTCCCTACGGATGATCCGGGTGATCCT
CTTCGCTGGCCCAGCTGGCTCAAATTGTCTGTCATACTCTCGACGTCCTT
GGTCAATTTTGTCTCCAACATGGGTGGTGCTGGATTGTCCGTTGCCGTCC
CGGTCTTGATGCAGCAGCTCCAGCGTTCCCAAGCAGAGGTAACCCAGCTA
CTCACGCTTTAACTTCTCCGCTCTCCTAGAAGCGCCGCCATACTTCTTCC
GCTCCGAGTATGTCGGTCTCATGGAAATCGCCGCTATTGTGGGATTCCTA
CTAGCATGCTACGGCGGTGGCTACCTATCCGATACCGTAAACAGAATTAT
TGCCCAACGCAGCAGCAGTAGCAGCATCCGCCCCGAACAACGCCTCATCT
CTCTCATCCCAGGAATGGCCATCGGGCCGGCAGGCTGTATCCTGCTCGCG
TTTGCCTGCGGCCACAAACTCCACTGGGCCGCCATCGCGGTTGGCTTCGG
AATGGTCTCGTTTGGGACCGCGTATACACCCAACATCGCTCTTACGTACA
TCGTGCACTTGCATCAACAAGATGCCGCGAACTGCCTTGTCTCAATTAGC
TTGGTCAAAAACCTGGTGGCATTCACGTTTCTGTATGTTGCTGTGGACTG
GGTTGAGAGGGAGGGTTACGTGCAGGTTTTTATGATTATGTTTATGTTGA
ATGTTTTGGCTCTTCTCTGTGCGGTCCCGTTGTACTTTTTGGGACGGAGG
AAGGACTTGAACGTATATAATGGGATGGAGGGGCGTGCGTAACTATGTTG
TCTTGATCTCTGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATG
GTAGAGTACGCCTCGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGC
GCTCGCCAGTTTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGA
CCTTCAAGCGACCGGAACCTTCTCAGGCACAGGAGTTACAGCCCGTCGCA
GAACACAAAGAGACTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGC
TCCAGAGGACTCCTATACCACCAACACGCCCCCATTTAAGGGTGTCCTTC
GGCCGTTCCATTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCG
CCTCTCAAGCTGTTGGTTCATCCGTCGGTCTGTTGGGGCATCTTTACCTA
CGGCATATCGCTAAGTCCGCAAATCATTATGATAGTATCGTACCCGAGAT
CGTTGCTGATATATTCTTCGTCCACGAGCGTGCTACGATGATGGCAATCT
TAACTTTCTGTTCCTGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGG
TCAAGTTTGGCAAACGTGCATCAATTATATCCTCGATGTTGCTTCAGGCA
GGGGCCCTGGTGTGGTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGG
CGCAAGATGCGTTCTTGGATTTGCTGCTGCTGCTGGCGAAATGCCTACCC
TGAGCCATCGGGGTCTTCAATTGATCCCAGTCCCTACGGATGATCCGGGT
GATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGTCTGTCATACTCTCGAC
GTCCTTGGTCAATTTTGTCTCCAACATGGGTGGTGCTGGATTGTCCGTTG
CCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTCCCAAGCAGAGGTAACC
CAGCTACTCACGCTTTAACTTCTCCGCTCTCCTAGAAGCGCCGCCATACT
TCTTCCGCTCCGAGTATGTCGGTCTCATGGAAATCGCCGCTATTGTGGGA
TTCCTACTAGCATGCTACGGCGGTGGCTACCTATCCGATACCGTAAACAG
AATTATTGCCCAACGCAGCAGCAGTAGCAGCATCCGCCCCGAACAACGCC
TCATCTCTCTCATCCCAGGAATGGCCATCGGGCCGGCAGGCTGTATCCTG
CTCGCGTTTGCCTGCGGCCACAAACTCCACTGGGCCGCCATCGCGGTTGG
CTTCGGAATGGTCTCGTTTGGGACCGCGTATACACCCAACATCGCTCTTA
CGTACATCGTGCACTTGCATCAACAAGATGCCGCGAACTGCCTTGTCTCA
ATTAGCTTGGTCAAAAACCTGGTGGCATTCACGTTTCTGTATGTTGCTGT
GGACTGGGTTGAGAGGGAGGGTTACGTGCAGGTTTTTATGATTATGTTTA
TGTTGAATGTTTTGGCTCTTCTCTGTGCGGTCCCGTTGTACTTTTTGGGA
CGGAGGAAGGACTTGAACGTATATAATGGGATGGAGGGGCGTGCGTAACT
ATGTTGTCTTGATCTCTGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGT
TTTATGGTAGAGTACGCCTCGGGCACGTGGCGGTCATACATGTGGCTTTG
CTTCGCGCTCGCCAGTTTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGG
AATCGACCTTCAAGCGACCGGAACCTTCTCAGGCACAGGAGTTACAGCCC
GTCGCAGAACACAAAGAGACTACGAGTTCATTCATCGAGAATGCCTCAGC
TGCAGCTCCAGAGGACTCCTATACCACCAACACGCCCCCATTTAAGGGTG
TCCTTCGGCCGTTCCATTACAATAAGGATGCCAGCTTTTTCAAGGCAGTG
ATCTCGCCTCTCAAGCTGTTGGTTCATCCGTCGGTCTGTTGGGGCATCTT
TACCTACGGCATATCGCTAAGTCCGCAAATCATTATGATAGTATCGTACC
CGAGATCGTTGCTGATATATTCTTCGTCCACGAGCGTGCTACGATGATGG
CAATCTTAACTTTCTGTTCCTGGGCATCGGCAATATCTTCTGGGTCCCGC
TTGCGGTCAAGTTTGGCAAACGTGCATCAATTATATCCTCGATGTTGCTT
CAGGCAGGGGCCCTGGTGTGGTGTGCGGTAGCTACGGGCTATGACAGCCT
CTTGGGCGCAAGATGCGTTCTTGGATTTGCTGCTGCTGCTGGCGAAATGC
CTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTCCCTACGGATGAT
CCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGTCTGTCATACT
CTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTGGTGCTGGATTGT
CCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTCCCAAGCAGAG
GTAACCCAGCTACTCACGCTTTAACTTCTCCGCTCTCCTAGAAGCGCCGC
CATACTTCTTCCGCTCCGAGTATGTCGGTCTCATGGAAATCGCCGCTATT
GTGGGATTCCTACTAGCATGCTACGGCGGTGGCTACCTATCCGATACCGT
AAACAGAATTATTGCCCAACGCAGCAGCAGTAGCAGCATCCGCCCCGAAC
AACGCCTCATCTCTCTCATCCCAGGAATGGCCATCGGGCCGGCAGGCTGT
ATCCTGCTCGCGTTTGCCTGCGGCCACAAACTCCACTGGGCCGCCATCGC
GGTTGGCTTCGGAATGGTCTCGTTTGGGACCGCGTATACACCCAACATCG
CTCTTACGTACATCGTGCACTTGCATCAACAAGATGCCGCGAACTGCCTT
GTCTCAATTAGCTTGGTCAAAAACCTGGTGGCATTCACGTTTCTGTATGT
TGCTGTGGACTGGGTTGAGAGGGAGGGTTACGTGCAGGTTTTTATGATTA
TGTTTATGTTGAATGTTTTGGCTCTTCTCTGTGCGGTCCCGTTGTACTTT
TTGGGACGGAGGAAGGACTTGAACGTATATAATGGGATGGAGGGGCGTGC
GTAACTATGTTGTCTTGATCTCTGGAGGCTCAGCTGTTGGCCCCTTAATT
GGAGGTTTTATGGTAGAGTACGCCTCGGGCACGTGGCGGTCATACATGTG
GCTTTGCTTCGCGCTCGCCAGTTTCAATATAGTGCTCTTGGTCTTCCTCT
TCCCGGAATCGACCTTCAAGCGACCGGAACCTTCTCAGGCACAGGAGTTA
CAGCCCGTCGCAGAACACAAAGAGACTACGAGTTCATTCATCGAGAATGC
CTCAGCTGCAGCTCCAGAGGACTCCTATACCACCAACACGCCCCCATTTA
AGGGTGTCCTTCGGCCGTTCCATTACAATAAGGATGCCAGCTTTTTCAAG
GCAGTGATCTCGCCTCTCAAGCTGTTGGTTCATCCGTCGGTCTGTTGGGG
CATCTTTACCTACGGCATATCGCTAAGTCCGCAAATCATTATGATAGTAT
CGTACCCGAGATCGTTGCTGATATATTCTTCGTCCACGAGCGTGCTACGA
TGATGGCAATCTTAACTTTCTGTTCCTGGGCATCGGCAATATCTTCTGGG
TCCCGCTTGCGGTCAAGTTTGGCAAACGTGCATCAATTATATCCTCGATG
TTGCTTCAGGCAGGGGCCCTGGTGTGGTGTGCGGTAGCTACGGGCTATGA
CAGCCTCTTGGGCGCAAGATGCGTTCTTGGATTTGCTGCTGCTGCTGGCG
AAATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTCCCTACG
GATGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGTCTGT
CATACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTGGTGCTG
GATTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTCCCAA
GCAGAGGTAACCCAGCTACTCACGCTTTAACTTCTCCGCTCTCCTAGAAG
CGCCGCCATACTTCTTCCGCTCCGAGTATGTCGGTCTCATGGAAATCGCC
GCTATTGTGGGATTCCTACTAGCATGCTACGGCGGTGGCTACCTATCCGA
TACCGTAAACAGAATTATTGCCCAACGCAGCAGCAGTAGCAGCATCCGCC
CCGAACAACGCCTCATCTCTCTCATCCCAGGAATGGCCATCGGGCCGGCA
GGCTGTATCCTGCTCGCGTTTGCCTGCGGCCACAAACTCCACTGGGCCGC
CATCGCGGTTGGCTTCGGAATGGTCTCGTTTGGGACCGCGTATACACCCA
ACATCGCTCTTACGTACATCGTGCACTTGCATCAACAAGATGCCGCGAAC
TGCCTTGTCTCAATTAGCTTGGTCAAAAACCTGGTGGCATTCACGTTTCT
GTATGTTGCTGTGGACTGGGTTGAGAGGGAGGGTTACGTGCAGGTTTTTA
TGATTATGTTTATGTTGAATGTTTTGGCTCTTCTCTGTGCGGTCCCGTTG
TACTTTTTGGGACGGAGGAAGGACTTGAACGTATATAATGGGATGGAGGG
GCGTGCGTAACTATGTTGTCTTGATCTCTGGAGGCTCAGCTGTTGGCCCC
TTAATTGGAGGTTTTATGGTAGAGTACGCCTCGGGCACGTGGCGGTCATA
CATGTGGCTTTGCTTCGCGCTCGCCAGTTTCAATATAGTGCTCTTGGTCT
TCCTCTTCCCGGAATCGACCTTCAAGCGACCGGAACCTTCTCAGGCACAG
GAGTTACAGCCCGTCGCAGAACACAAAGAGACTACGAGTTCATTCATCGA
GAATGCCTCAGCTGCAGCTCCAGAGGACTCCTATACCACCAACACGCCCC
CATTTAAGGGTGTCCTTCGGCCGTTCCATTACAATAAGGATGCCAGCTTT
TTCAAGGCAGTGATCTCGCCTCTCAAGCTGTTGGTTCATCCGTCGGTCTG
TTGGGGCATCTTTACCTACGGCATATCGCTAAGTCCGCAAATCATTATGA
TAGTATCGTACCCGAGATCGTTGCTGATATATTCTTCGTCCACGAGCGTG
CTACGATGATGGCAATCTTAACTTTCTGTTCCTGGGCATCGGCAATATCT
TCTGGGTCCCGCTTGCGGTCAAGTTTGGCAAACGTGCATCAATTATATCC
TCGATGTTGCTTCAGGCAGGGGCCCTGGTGTGGTGTGCGGTAGCTACGGG
CTATGACAGCCTCTTGGGCGCAAGATGCGTTCTTGGATTTGCTGCTGCTG
CTGGCGAAATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTC
CCTACGGATGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATT
GTCTGTCATACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTG
GTGCTGGATTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGT
TCCCAAGCAGAGGTAACCCAGCTACTCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_110950-T1 | ATCC64974_110950-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4785621..4787403 - |
|
