You are here

Home

ATCC64974_11170-T1, ATCC64974_11170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_11170-T1
Unique NameATCC64974_11170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:1157365..1161003-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_11170-T1 ID=ATCC64974_11170-T1|Name=ATCC64974_11170-T1|organism=Aspergillus niger N402|type=mRNA|length=3639bp|location=Sequence derived from alignment at OGUI01000002.1:1157365..1161003- (Aspergillus niger N402)
ATGAATATTCATGAAGCTGATGAGCGCCCGTTGAAGAAGAGGCGCTTTTT
CGTGGATGATGAAGATCTCGCCACTCCCGAACCATCCACTGATTCTGTCA
CAGCAAGTCTCCTCACGCCCGATTCCTCGTCCCTGACCGGTCAAGATGCC
CAGCCACAGCCTACACGATCTAAAAATGGCCCGGAAAATACAAAAGCACT
TTTGATGGATGATTCTACGCGGGTCGAGGATCATGCTGTGCCACATGTGG
AGCAAGAGATCGTGCAAGCGGAACACCACAATGCAGATTCTAGGACAGAG
GGTGCCCTACTACAGGTGGACTACGACGGGTTCGATATAACGACGTTCAC
AAGTATTATAGGGGAAAACCTCTCGGCAGATTCAATACAAAGAATCCGAA
GCGCTGCTGGTGACGACCTTGAACGGGCGGTCAACATCTACTTCGATGGC
TCTTGGAAGAAATCCCCAACTCCTCGTGCTCAGAATCAGACTACTCTTAC
CGCTCGCCAACGCCCGCTTCCTACACAACCCCATAAGATCGCTACTCCCC
TGTCAGCAGCCTGTAAACCACACACCCAGACCCTACCGCCTGACAAGGTC
ACATCTCGCCCTGCGACTCAGCCTCCCTTAAGATACATAGGTGCGTTTGG
TGTTGGAGCCTGGGCTACAAGGAGTGGAGCTGGATTCCTCAGACATGGGG
ATCTTGTAAATATTGAGCGTACACGGTCCCAGCCGCTCTCAAAGCGGAAC
CGTGCCGGGAAACTGGTTTCTAATCAGAAGAGTGACGTTCTCACCCGGTT
TACCACTAAATCAGGGCAGGAAATAGGAAGATTGCCCCGGGAAACAGCTG
AATGGGTCTCAACCCTGCTGGATCAAAGGGTGTGTACATTCGAAGGTGTA
TGCGTATACGTGCCGGACCGGGTCCGGGTGAATGACACCATCTATCTGCA
GCTGCGATGCTACTTGCGCATCGAGGCATTCCAGCCACGGATATTCAGTC
AATCGATGGATGACAATAGGTCGGTTGCAATCTTCGAGGAGAAAGAAAGT
GCAGATGAGAAAGCACTGCGGCTCCGCCAAGTGGCTCTTGTGAAGCTGTT
TGATGAAATCCATCTTCAACCGACATCCGTCAATGACATGACTAGAAATC
ATAAGAAAGAAGGGTTGCTTCGTGCGGCGGAAATGGCTGAACAGCACGAG
CGAGTGAAAAAAGAAAATCAAACAAATGACGACTCTTCGGAGGAGGACAG
CCCTGAGCTTGAAGAGGATCAGCTTGATACCCTCTATAAGAAGGCTCAGT
CGTTCGATTTTAGCATGCCTGAAGCAGAACCTGCCTCGTCGTTTACCTTG
CATCTTCGAAAATATCAGAGGCAGGCACTATACTGGATGCTCGCAAAGGA
AAAGGACAATAAGTCTGCAAGGGAGACGTCGCTGCATCCCTTATGGGAGG
AGTACAGTTGGCCGTCCAGGGATGTCGACGACAAAGAACTCCCAGTTGTG
GCTGGCATTGACCACTTTTACGTCAACCCTTACTCTGGCGAGCTTAGCCT
TGACTTCCCTGTCCAAGAGCAGCATTGCCTTGGGGGGATCCTGGCAGATG
AAATGGGCCTGGGTAAGACGATTGAGATGCTCAGTTTGGTCCACTCTCAT
CGCATTATGCCTCAGAAGCCCACTGATCTTGTGAGGTTGCCTCAGTCGGC
TTCCGGGGTCGTACCCGCACCATATACCACTCTTGTGATTGCGCCCACAT
CCCTTCTCTCGCAGTGGGAAAGTGAAGCACTGAAGGCTTCGCAGCCGGGA
ACAATGAACGTCCTTATGTATTACGGGGCGGACAAGAATATCAATCTCAA
AAACCTCTGCGCTTCGGGAAATGCTGCTGCCCCCAATTTAATCATAACCA
GCTATGGCGTTGTTCTCTCGGAATACCGTCAGCACATGTCCGCGTTGCTC
TCATCTATGAGCTCCGGTGGCCTATTTTCCGTGGACTTCTTCCGCGTTAT
CGTCGATGAAGCTCATGTAATCAAGAACCGTCTGTCAAAGACAGCCAAGG
CGTGCTATGAGCTCAAGGCAACCCATCGTTGGGTGTTGACAGGAACTCCC
ATCGTTAATCGCCTGGAGGACCTGTTCAGCCTTGTGAGATTTCTCAAGGT
CGAGCCATGGAATAACTTCTCATTCTGGAAGACATTTATTACCGTGCCTT
TTGAGTCCAAGGACTATGTGCGCGCCCTGAACGTTGTGCAGAGCGTGCTG
GAGCCCCTGGTCCTCCGACGTACGAAGACAATGAAGACCCCCGAGGGTGA
ACCTTTAGTGCCTTTACCACGTCGCACCATCACAATAGAGGAAGTCGAAC
TTCCAGACCAGGAGCGGGAGATTTATGATCTTATCTTTACACGGGCAAAG
CAGACGTTCAATCACAATGTCGAAGCTGGCACTCTGTTGAAGTCCTATTC
AACAATCTTCGCACAAATTCTCCGCCTCCGCCAGACCTGCTGTCATCCTA
TCCTCACACGCAACAAAGCGATAGTTGCAGACGAGGAAGATGCAGCAGCG
GCTGCTGACGCAGCCAACGACCTCAAGGACGACATGGATCTTCAAGATCT
CATTGATCGCTTCAAGGCATCCACCGAAGCAGCCGAATCCAACGAGCCTC
AGGATCCCTCCGCCAAATTCACTGCCCATGCATTGAAACAAATCCAAAAC
GAAGCCAGCGGCGAATGTCCCATTTGCTCGGAAGAGCCCATGATTGACCC
TGCCGTAACGGCATGCTGGCACAGTGCATGCAAGAAATGTCTGGAGGACT
ACATCCGCCACCAAACCGACAAGGGCATGGACCCTCGGTGCTTTTCATGC
CGAGCACCCACCACGTCGCGGGACATTTTCGAAGTGGTTCGTCATGAAAG
CCCCAATACCACACCCGAAGACGATATATATAGCAGTACTCCAACCCCCT
CTCAAGCGCCTCCCCGAATAAGCCTCCGCCGTATCCACCCTCTTTCGCCG
TCTGCCCATACATCTGCCAAAGTGCATGCCCTTCTCGCTCATCTTGCCCG
CGTCCCTGCCAATACCAAATCCGTTGTCTTTTCCCAATTTACCAGTTTCC
TCGACCTCATTTCCCCCCAACTCACCCGTGCGGGTATCCATCACGTCCGT
CTGGATGGTACCATGCCGCACAAAGCCCGTGCGGAAACCCTCGCGCAATT
CAACCGGGTCGAAACCTTTGCCGACCAAAATGAAATTGACAACGATGTCG
ACGCCAACGATTCCACCCAGCTTCCCCTCTCCAGGGCAAAGCACAGACAC
TCGACCGCCCCGCCCCCTCCCACCGTTCTTCTTATCAGTCTCCGCGCCGG
AGGTGTGGGTCTTAATCTCACGGCAGCTAGTAATGTCTTCATGATGGATC
CTTGGTGGAGCTTTGCAATTGAGGCTCAGGCTATTGATCGGGTTCATCGC
ATGGGTCAGACACGGGATGTGCAAGTGACACGGTTCGTGGTGAAGGACTC
CATCGAGGGAAGAATGTTGAGGGTTCAGGAACGGAAGATGAATATTGCAG
GGTCTTTAGGACTGAGGGTTGGTGGAGATGGCTCCGAGGATGACAAGAAG
AAGGAAAGAATCGAGGAGTTGAGGTTGTTATTTGAATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:1157365..1161003-

>ATCC64974_11170-T1 ID=ATCC64974_11170-T1|Name=ATCC64974_11170-T1|organism=Aspergillus niger N402|type=CDS|length=3639bp|location=Sequence derived from alignment at OGUI01000002.1:1157365..1161003- (Aspergillus niger N402)
ATGAATATTCATGAAGCTGATGAGCGCCCGTTGAAGAAGAGGCGCTTTTT
CGTGGATGATGAAGATCTCGCCACTCCCGAACCATCCACTGATTCTGTCA
CAGCAAGTCTCCTCACGCCCGATTCCTCGTCCCTGACCGGTCAAGATGCC
CAGCCACAGCCTACACGATCTAAAAATGGCCCGGAAAATACAAAAGCACT
TTTGATGGATGATTCTACGCGGGTCGAGGATCATGCTGTGCCACATGTGG
AGCAAGAGATCGTGCAAGCGGAACACCACAATGCAGATTCTAGGACAGAG
GGTGCCCTACTACAGGTGGACTACGACGGGTTCGATATAACGACGTTCAC
AAGTATTATAGGGGAAAACCTCTCGGCAGATTCAATACAAAGAATCCGAA
GCGCTGCTGGTGACGACCTTGAACGGGCGGTCAACATCTACTTCGATGGC
TCTTGGAAGAAATCCCCAACTCCTCGTGCTCAGAATCAGACTACTCTTAC
CGCTCGCCAACGCCCGCTTCCTACACAACCCCATAAGATCGCTACTCCCC
TGTCAGCAGCCTGTAAACCACACACCCAGACCCTACCGCCTGACAAGGTC
ACATCTCGCCCTGCGACTCAGCCTCCCTTAAGATACATAGGTGCGTTTGG
TGTTGGAGCCTGGGCTACAAGGAGTGGAGCTGGATTCCTCAGACATGGGG
ATCTTGTAAATATTGAGCGTACACGGTCCCAGCCGCTCTCAAAGCGGAAC
CGTGCCGGGAAACTGGTTTCTAATCAGAAGAGTGACGTTCTCACCCGGTT
TACCACTAAATCAGGGCAGGAAATAGGAAGATTGCCCCGGGAAACAGCTG
AATGGGTCTCAACCCTGCTGGATCAAAGGGTGTGTACATTCGAAGGTGTA
TGCGTATACGTGCCGGACCGGGTCCGGGTGAATGACACCATCTATCTGCA
GCTGCGATGCTACTTGCGCATCGAGGCATTCCAGCCACGGATATTCAGTC
AATCGATGGATGACAATAGGTCGGTTGCAATCTTCGAGGAGAAAGAAAGT
GCAGATGAGAAAGCACTGCGGCTCCGCCAAGTGGCTCTTGTGAAGCTGTT
TGATGAAATCCATCTTCAACCGACATCCGTCAATGACATGACTAGAAATC
ATAAGAAAGAAGGGTTGCTTCGTGCGGCGGAAATGGCTGAACAGCACGAG
CGAGTGAAAAAAGAAAATCAAACAAATGACGACTCTTCGGAGGAGGACAG
CCCTGAGCTTGAAGAGGATCAGCTTGATACCCTCTATAAGAAGGCTCAGT
CGTTCGATTTTAGCATGCCTGAAGCAGAACCTGCCTCGTCGTTTACCTTG
CATCTTCGAAAATATCAGAGGCAGGCACTATACTGGATGCTCGCAAAGGA
AAAGGACAATAAGTCTGCAAGGGAGACGTCGCTGCATCCCTTATGGGAGG
AGTACAGTTGGCCGTCCAGGGATGTCGACGACAAAGAACTCCCAGTTGTG
GCTGGCATTGACCACTTTTACGTCAACCCTTACTCTGGCGAGCTTAGCCT
TGACTTCCCTGTCCAAGAGCAGCATTGCCTTGGGGGGATCCTGGCAGATG
AAATGGGCCTGGGTAAGACGATTGAGATGCTCAGTTTGGTCCACTCTCAT
CGCATTATGCCTCAGAAGCCCACTGATCTTGTGAGGTTGCCTCAGTCGGC
TTCCGGGGTCGTACCCGCACCATATACCACTCTTGTGATTGCGCCCACAT
CCCTTCTCTCGCAGTGGGAAAGTGAAGCACTGAAGGCTTCGCAGCCGGGA
ACAATGAACGTCCTTATGTATTACGGGGCGGACAAGAATATCAATCTCAA
AAACCTCTGCGCTTCGGGAAATGCTGCTGCCCCCAATTTAATCATAACCA
GCTATGGCGTTGTTCTCTCGGAATACCGTCAGCACATGTCCGCGTTGCTC
TCATCTATGAGCTCCGGTGGCCTATTTTCCGTGGACTTCTTCCGCGTTAT
CGTCGATGAAGCTCATGTAATCAAGAACCGTCTGTCAAAGACAGCCAAGG
CGTGCTATGAGCTCAAGGCAACCCATCGTTGGGTGTTGACAGGAACTCCC
ATCGTTAATCGCCTGGAGGACCTGTTCAGCCTTGTGAGATTTCTCAAGGT
CGAGCCATGGAATAACTTCTCATTCTGGAAGACATTTATTACCGTGCCTT
TTGAGTCCAAGGACTATGTGCGCGCCCTGAACGTTGTGCAGAGCGTGCTG
GAGCCCCTGGTCCTCCGACGTACGAAGACAATGAAGACCCCCGAGGGTGA
ACCTTTAGTGCCTTTACCACGTCGCACCATCACAATAGAGGAAGTCGAAC
TTCCAGACCAGGAGCGGGAGATTTATGATCTTATCTTTACACGGGCAAAG
CAGACGTTCAATCACAATGTCGAAGCTGGCACTCTGTTGAAGTCCTATTC
AACAATCTTCGCACAAATTCTCCGCCTCCGCCAGACCTGCTGTCATCCTA
TCCTCACACGCAACAAAGCGATAGTTGCAGACGAGGAAGATGCAGCAGCG
GCTGCTGACGCAGCCAACGACCTCAAGGACGACATGGATCTTCAAGATCT
CATTGATCGCTTCAAGGCATCCACCGAAGCAGCCGAATCCAACGAGCCTC
AGGATCCCTCCGCCAAATTCACTGCCCATGCATTGAAACAAATCCAAAAC
GAAGCCAGCGGCGAATGTCCCATTTGCTCGGAAGAGCCCATGATTGACCC
TGCCGTAACGGCATGCTGGCACAGTGCATGCAAGAAATGTCTGGAGGACT
ACATCCGCCACCAAACCGACAAGGGCATGGACCCTCGGTGCTTTTCATGC
CGAGCACCCACCACGTCGCGGGACATTTTCGAAGTGGTTCGTCATGAAAG
CCCCAATACCACACCCGAAGACGATATATATAGCAGTACTCCAACCCCCT
CTCAAGCGCCTCCCCGAATAAGCCTCCGCCGTATCCACCCTCTTTCGCCG
TCTGCCCATACATCTGCCAAAGTGCATGCCCTTCTCGCTCATCTTGCCCG
CGTCCCTGCCAATACCAAATCCGTTGTCTTTTCCCAATTTACCAGTTTCC
TCGACCTCATTTCCCCCCAACTCACCCGTGCGGGTATCCATCACGTCCGT
CTGGATGGTACCATGCCGCACAAAGCCCGTGCGGAAACCCTCGCGCAATT
CAACCGGGTCGAAACCTTTGCCGACCAAAATGAAATTGACAACGATGTCG
ACGCCAACGATTCCACCCAGCTTCCCCTCTCCAGGGCAAAGCACAGACAC
TCGACCGCCCCGCCCCCTCCCACCGTTCTTCTTATCAGTCTCCGCGCCGG
AGGTGTGGGTCTTAATCTCACGGCAGCTAGTAATGTCTTCATGATGGATC
CTTGGTGGAGCTTTGCAATTGAGGCTCAGGCTATTGATCGGGTTCATCGC
ATGGGTCAGACACGGGATGTGCAAGTGACACGGTTCGTGGTGAAGGACTC
CATCGAGGGAAGAATGTTGAGGGTTCAGGAACGGAAGATGAATATTGCAG
GGTCTTTAGGACTGAGGGTTGGTGGAGATGGCTCCGAGGATGACAAGAAG
AAGGAAAGAATCGAGGAGTTGAGGTTGTTATTTGAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAD5ATCC64974_11170Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11170-T1.cdsATCC64974_11170-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11170-T1.exon1ATCC64974_11170-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11170-T1ATCC64974_11170-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR038718
DBxrefInterPro:IPR000330
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014905
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001841
DBxrefPFAM:PF00176
DBxrefPFAM:PF08797
DBxrefPFAM:PF00271
ProductDNA helicase rad5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:1157365..1161003 -
Powered by Drupal