You are here

Home

ATCC64974_111780-T1, ATCC64974_111780-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_111780-T1
Unique NameATCC64974_111780-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000018.1:12142..13262+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_111780-T1 ID=ATCC64974_111780-T1|Name=ATCC64974_111780-T1|organism=Aspergillus niger N402|type=mRNA|length=1121bp|location=Sequence derived from alignment at OGUI01000018.1:12142..13262+ (Aspergillus niger N402)
ATGGTGCGCTCGCTCGTGGAATGTGGCTGGTACGTGAATGAGGTGGATGT
AGAAGGGCGAACGCCATTACACTGCGCCGCGGAGAATGGACACGACCCAG
TCGTCCAGGTACTACTGGCGAACGAGCAGCTTGACGTAAACGCACGAGAC
CACCGGAAGTCAACCGCCTTGCACGAAGCCGCCTGGAAAGGGTATTTGGC
AGTGGCTAATCTACTCCTGACTAAGTCCAACGTTGATATCAACGTCGAGA
TAGGTACGGCTGCACTCCACTGTGGTATGCCACGCGACACGGTCACTATA
ACGTGGCTTTGAAGTTACTGGAAGAGTCAAACGTCATCGTCAATACCGTG
TGTCGATTTCAGACTCAGCCTGAGAAATCAACATCGCTCCATCATGCGGT
CAACTGCAATGCAACGCAGACCGTGCAGCGGTTGTTGGCCCGGACAGCTC
TTAACCCGAACGTTACGGACGACTGCGGCCGCACTCCACTGAGCTGTGCA
TCCCGCGCAGGTAACTTGCCAATGGTGGAGCTCCTGCTGAGTCGATCTGA
CGTGCGAGTGAATTCAGCAGAGCAAAACGAACAGCCACCGCTGTGGTCAG
CTGCTTCGCAAGGACATATCCAGGTCGTCGAGCGCCTGCTGCAGTGTGGA
GATATCGAAGTTAATCAGGGATGGGGCCCTTATTCGTCTCCGCTCCTGGC
CGCAATAACGCGCGGTCATTCCGGTGTAGCCATGCGGTTGCTGAATTGCG
TCCCACGGCCGGATGTCAATGCCCGGACCTACCTGGGGGATTCTGCTCTC
TCTCTGACCGCTCGCGAAGGACATGTGGACGTGGTTGCGCGTCTCTTAGA
GGACTGGCAGACTGACCGCAATGGTGCCGACAGGCAGGGACGCACTGCGT
TATGGTGGGCGGCCCGGGCGGGTCAGGCTCAAATTGTGCAGCGGCTGCTG
GAGGACGACCGGGTTCTAATCGACGTGATGGATAACGACGGGGTAGATGC
TATGGGTGCCGCGAGGAGCTATTATCACTTTGAAGTGGTTTGGCTGATTC
GGACTCATTACTTCGGGCGATACAGTAACTGGACAGGCGGTAGACCCCAC
AATTTGACGACTAGAAGTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000018.1:12142..13262+

>ATCC64974_111780-T1 ID=ATCC64974_111780-T1|Name=ATCC64974_111780-T1|organism=Aspergillus niger N402|type=CDS|length=2118bp|location=Sequence derived from alignment at OGUI01000018.1:12142..13262+ (Aspergillus niger N402)
ATGGTGCGCTCGCTCGTGGAATGTGGCTGGTACGTGAATGAGGTGGATGT
AGAAGGGCGAACGCCATTACACTGCGCCGCGGAGAATGGACACGACCCAG
TCGTCCAGGTACTACTGGCGAACGAGCAGCTTGACGTAAACGCACGAGAC
CACCGGAAGTCAACCGCCTTGCACGAAGCCGCCTGGAAAGGGTACGGCTG
CACTCCACTGTGGTATGCCACGCGACACGGTCACTATAACGTGGCTTTGA
AGTTACTGGAAGAGTCAAACGTCATCGTCAATACCGTGTGTCGATTTCAG
ACTCAGCCTGAGAAATCAACATCGCTCCATCATGCGGTCAACTGCAATGC
AACGCAGACCGTGCAGCGGTTGTTGGCCCGGACAGCTCTTAACCCGAACG
TTACGGACGACTGCGGCCGCACTCCACTGAGCTGTGCATCCCGCGCAGGT
AACTTGCCAATGGTGGAGCTCCTGCTGAGTCGATCTGACGTGCGAGTGAA
TTCAGCAGAGCAAAACGAACAGCCACCGCTGTGGTCAGCTGCTTCGCAAG
GACATATCCAGGTCGTCGAGCGCCTGCTGCAGTGTGGAGATATCGAAGTT
AATCAGGGATGGGGCCCTTATTCGTCTCCGCTCCTGGCCGCAATAACGCG
CGGTCATTCCGGTGTAGCCATGCGGTTGCTGAATTGCGTCCCACGGCCGG
ATGTCAATGCCCGGACCTACCTGGGGGATTCTGCTCTCTCTCTGACCGCT
CGCGAAGGACATGTGGACGTGGTTGCGCGTCTCTTAGAGGACTGGCAGAC
TGACCGCAATGGTGCCGACAGGCAGGGACGCACTGCGTTATGGTGGGCGG
CCCGGGCGGGTCAGGCTCAAATTGTGCAGCGGCTGCTGGAGGACGACCGG
GTTCTAATCGACGTGATGGATAACGACGGGGTAGATGCTATGGGTGCCGC
GAGGAGCTATTATCACTTTGAAGTGGTTTGGCTGATTCGGACTCATTACT
TCGGGCGATACAGTAACTGGACAGGCGGTAGACCCCACAATTTGACGACT
AGAAGTTAGATGGTGCGCTCGCTCGTGGAATGTGGCTGGTACGTGAATGA
GGTGGATGTAGAAGGGCGAACGCCATTACACTGCGCCGCGGAGAATGGAC
ACGACCCAGTCGTCCAGGTACTACTGGCGAACGAGCAGCTTGACGTAAAC
GCACGAGACCACCGGAAGTCAACCGCCTTGCACGAAGCCGCCTGGAAAGG
GTACGGCTGCACTCCACTGTGGTATGCCACGCGACACGGTCACTATAACG
TGGCTTTGAAGTTACTGGAAGAGTCAAACGTCATCGTCAATACCGTGTGT
CGATTTCAGACTCAGCCTGAGAAATCAACATCGCTCCATCATGCGGTCAA
CTGCAATGCAACGCAGACCGTGCAGCGGTTGTTGGCCCGGACAGCTCTTA
ACCCGAACGTTACGGACGACTGCGGCCGCACTCCACTGAGCTGTGCATCC
CGCGCAGGTAACTTGCCAATGGTGGAGCTCCTGCTGAGTCGATCTGACGT
GCGAGTGAATTCAGCAGAGCAAAACGAACAGCCACCGCTGTGGTCAGCTG
CTTCGCAAGGACATATCCAGGTCGTCGAGCGCCTGCTGCAGTGTGGAGAT
ATCGAAGTTAATCAGGGATGGGGCCCTTATTCGTCTCCGCTCCTGGCCGC
AATAACGCGCGGTCATTCCGGTGTAGCCATGCGGTTGCTGAATTGCGTCC
CACGGCCGGATGTCAATGCCCGGACCTACCTGGGGGATTCTGCTCTCTCT
CTGACCGCTCGCGAAGGACATGTGGACGTGGTTGCGCGTCTCTTAGAGGA
CTGGCAGACTGACCGCAATGGTGCCGACAGGCAGGGACGCACTGCGTTAT
GGTGGGCGGCCCGGGCGGGTCAGGCTCAAATTGTGCAGCGGCTGCTGGAG
GACGACCGGGTTCTAATCGACGTGATGGATAACGACGGGGTAGATGCTAT
GGGTGCCGCGAGGAGCTATTATCACTTTGAAGTGGTTTGGCTGATTCGGA
CTCATTACTTCGGGCGATACAGTAACTGGACAGGCGGTAGACCCCACAAT
TTGACGACTAGAAGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_111780ATCC64974_111780Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_111780-T1.exon1ATCC64974_111780-T1.exon1Aspergillus niger N402exon
ATCC64974_111780-T1.exon2ATCC64974_111780-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_111780-T1.cdsATCC64974_111780-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_111780-T1ATCC64974_111780-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000181.1
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000018.1supercontigOGUI01000018.1:12142..13262 +
Powered by Drupal