You are here

Home

ATCC64974_11320-T1, ATCC64974_11320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_11320-T1
Unique NameATCC64974_11320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:21900..22416+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_11320-T1 ID=ATCC64974_11320-T1|Name=ATCC64974_11320-T1|organism=Aspergillus niger N402|type=mRNA|length=517bp|location=Sequence derived from alignment at OGUI01000003.1:21900..22416+ (Aspergillus niger N402)
ATGACCAACACTCAGTTTGGCGAAGAATGCGACATTGTCGCTGTCCTGAC
CCCTAAGCCTGGCAAATTGGATCGAGTGGGTTACCCTCCACGGTGGCCGC
AGGGACCTATTCTGCTACACTGTGCCTCTCGAACTTACTGACTTAATCAT
GTCTGTAGGTTGCTGAGCTTCTCACCAAGCTTACCGCATGTGTCAAGAAG
AATGAACCCGGTGTTTTGAGTTTCCACTTGTACAAAGACTTCGATCGTGA
GACCGGTCAAGAGGAGCTGGTTTTGGTTGAGAAGTAAGCTTCTGTCCTTT
TTCCTTATTCATATTTTTTCTTTTCCGTTTTTCTCTTGACTCGCCCGGTC
GCACGCATGCTGACTCTGCTAGATACGTCAACAAAGAGGCATATGATCTT
CACGCCGAACTGCCCGACTTCCAAGCCATGCATGCTACTTTCCGCTCCGA
GGAACTCATGGCCAAACCCATCCTGATCAAGAGTGTGAAGCCATTGGTGG
GGTTTGAGCGGAGCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:21900..22416+

>ATCC64974_11320-T1 ID=ATCC64974_11320-T1|Name=ATCC64974_11320-T1|organism=Aspergillus niger N402|type=CDS|length=1035bp|location=Sequence derived from alignment at OGUI01000003.1:21900..22416+ (Aspergillus niger N402)
ATGACCAACACTCAGTTTGGCGAAGAATGCGACATTGTCGCTGTCCTGAC
CCCTAAGCCTGGCAAATTGGATCGAGTTGCTGAGCTTCTCACCAAGCTTA
CCGCATGTGTCAAGAAGAATGAACCCGGTGTTTTGAGTTTCCACTTGTAC
AAAGACTTCGATCGTGAGACCGGTCAAGAGGAGCTGGTTTTGGTTGAGAA
ATACGTCAACAAAGAGGCATATGATCTTCACGCCGAACTGCCCGACTTCC
AAGCCATGCATGCTACTTTCCGCTCCGAGGAACTCATGGCCAAACCCATC
CTGATCAAGAGTGTGAAGCCATTGGTGGGGTTTGAGCGGAGCTAGATGAC
CAACACTCAGTTTGGCGAAGAATGCGACATTGTCGCTGTCCTGACCCCTA
AGCCTGGCAAATTGGATCGAGTTGCTGAGCTTCTCACCAAGCTTACCGCA
TGTGTCAAGAAGAATGAACCCGGTGTTTTGAGTTTCCACTTGTACAAAGA
CTTCGATCGTGAGACCGGTCAAGAGGAGCTGGTTTTGGTTGAGAAATACG
TCAACAAAGAGGCATATGATCTTCACGCCGAACTGCCCGACTTCCAAGCC
ATGCATGCTACTTTCCGCTCCGAGGAACTCATGGCCAAACCCATCCTGAT
CAAGAGTGTGAAGCCATTGGTGGGGTTTGAGCGGAGCTAGATGACCAACA
CTCAGTTTGGCGAAGAATGCGACATTGTCGCTGTCCTGACCCCTAAGCCT
GGCAAATTGGATCGAGTTGCTGAGCTTCTCACCAAGCTTACCGCATGTGT
CAAGAAGAATGAACCCGGTGTTTTGAGTTTCCACTTGTACAAAGACTTCG
ATCGTGAGACCGGTCAAGAGGAGCTGGTTTTGGTTGAGAAATACGTCAAC
AAAGAGGCATATGATCTTCACGCCGAACTGCCCGACTTCCAAGCCATGCA
TGCTACTTTCCGCTCCGAGGAACTCATGGCCAAACCCATCCTGATCAAGA
GTGTGAAGCCATTGGTGGGGTTTGAGCGGAGCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_11320ATCC64974_11320Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11320-T1.exon1ATCC64974_11320-T1.exon1Aspergillus niger N402exon
ATCC64974_11320-T1.exon2ATCC64974_11320-T1.exon2Aspergillus niger N402exon
ATCC64974_11320-T1.exon3ATCC64974_11320-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11320-T1.cdsATCC64974_11320-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11320-T1ATCC64974_11320-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR007138
DBxrefPFAM:PF03992
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:21900..22416 +
Powered by Drupal