You are here

Home

ATCC64974_11620-T1, ATCC64974_11620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_11620-T1
Unique NameATCC64974_11620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:90329..91780-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_11620-T1 ID=ATCC64974_11620-T1|Name=ATCC64974_11620-T1|organism=Aspergillus niger N402|type=mRNA|length=1452bp|location=Sequence derived from alignment at OGUI01000003.1:90329..91780- (Aspergillus niger N402)
ATGACCGGTTCCAGCCAACTCACAGCCCTGGAGGCCTTTCTCCTTTCGCA
TCCCAGCATCGGCTACATCCCGCCCACCTCCGCCGAGTATGTGCCCACAG
CCAACCGGGTGTTCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGTG
CAGCCCCAGTCTCCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGAC
CCACTCTGTACCCTTTACCGTTCGCTCGGGCGGCCACAATCTCGAGGCTC
GCTCCGTCGTGAATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACAGCC
GTCACGGTCGCCCCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTCT
CCAAGGTGAACTGGCTAATATCCTCTGGGAGGAAGGGCTGGTTACTCCGA
CCGGCTCTATCCCCAGCGTCGGATATGTCGGCTGGGCCATGTATGGCGGC
TATGGGCCCTTTTCGTCTCATTGGGGACTGGGCGTTGATCAGATTCTGGG
TGCTACGGTGGTGGATGCTAATGGGGAGATTGTTGTTGCTGATAAGTTCC
TCCTAAGGGGTATCCGTGGTGCAGGAGGAATCTTCGGCATCATTGTTGAC
GTTACTATCAAGGTCTACTCCCTTCCAAAGGTACGTCCACTTCCCCAAAG
ATAGTTAACAGCGAGTGTACTAAACGTACAGCTCCTCGCCGGCGCAATCA
TTTTCGACTCCTCCGACATCACTCAAACTATCATTACTTTCAACGCCGCC
TATGAGAATCTCCTCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCA
ACAAGTCGCCTTCAACAGTCCTCAGGGTCGCGTATTCGCTGTGCTCTTTA
CATGGAGCCACCCCGACCTAGAGGAGGGCCAACGATGGGCGGAGAGGATT
TCCTCCCTCGCCCCGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCC
GGACTGGTTCACAGGTAATGGTGCCCTGGTACCCGAAGCTGTGTATGGGT
CCCTCCAAACTCATAACGTCCGGCGCATCAATCCCGCCGTGGCGGAGGTG
ATTGCACGGAATGTGGCATCCATGCCGTCTGATCCGGGCACGATGGCCAC
AATCCATCAGTTGCGGGGACAGTCTGCCGGTGAAGACGCAGACAAGCTCG
AGCATTCTGTCTTTGCGACGAGGGAGCCGCATTATATGCTTGAGTTTGTG
GGATGTGCTACAGATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGT
TAAACTGGCAGAGGAGATTGTGCAGGCCGATGAGGGGAATGTCTTGCCCA
CGGCGTATGTGTCTTTGATGAGATTCGCGAGCCTGAAGCCGGAAGAGGCA
GTCAAGAAGGCGTTTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCA
GAGGTTTGATCCGGAGAATGTGTTTGCGTTGGCGCTGCCGGCGTTGAAGT
AG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:90329..91780-

>ATCC64974_11620-T1 ID=ATCC64974_11620-T1|Name=ATCC64974_11620-T1|organism=Aspergillus niger N402|type=CDS|length=2802bp|location=Sequence derived from alignment at OGUI01000003.1:90329..91780- (Aspergillus niger N402)
CTCCTCGCCGGCGCAATCATTTTCGACTCCTCCGACATCACTCAAACTAT
CATTACTTTCAACGCCGCCTATGAGAATCTCCTCAACACAGAGGGCCTCC
CTCCTCCACTGACCCTGCAACAAGTCGCCTTCAACAGTCCTCAGGGTCGC
GTATTCGCTGTGCTCTTTACATGGAGCCACCCCGACCTAGAGGAGGGCCA
ACGATGGGCGGAGAGGATTTCCTCCCTCGCCCCGTTGCTCATGAGCACCG
TCGGCCCCACGACCGTCCCGGACTGGTTCACAGGTAATGGTGCCCTGGTA
CCCGAAGCTGTGTATGGGTCCCTCCAAACTCATAACGTCCGGCGCATCAA
TCCCGCCGTGGCGGAGGTGATTGCACGGAATGTGGCATCCATGCCGTCTG
ATCCGGGCACGATGGCCACAATCCATCAGTTGCGGGGACAGTCTGCCGGT
GAAGACGCAGACAAGCTCGAGCATTCTGTCTTTGCGACGAGGGAGCCGCA
TTATATGCTTGAGTTTGTGGGATGTGCTACAGATAAGCAAAAGGCGGCGG
CATCTGAAGAGTGGGCAGTTAAACTGGCAGAGGAGATTGTGCAGGCCGAT
GAGGGGAATGTCTTGCCCACGGCGTATGTGTCTTTGATGAGATTCGCGAG
CCTGAAGCCGGAAGAGGCAGTCAAGAAGGCGTTTGGGGCCAATGCAGAGG
CGGTGCGCACGTTGAAGCAGAGGTTTGATCCGGAGAATGTGTTTGCGTTG
GCGCTGCCGGCGTTGAAGTAGATGACCGGTTCCAGCCAACTCACAGCCCT
GGAGGCCTTTCTCCTTTCGCATCCCAGCATCGGCTACATCCCGCCCACCT
CCGCCGAGTATGTGCCCACAGCCAACCGGGTGTTCATCGCCGGCATCAAC
GCCCGTCCACTGGCCATCGTGCAGCCCCAGTCTCCCGCAGATGTCGCAGC
ACTCGTTAAATTCGCCAAGACCCACTCTGTACCCTTTACCGTTCGCTCGG
GCGGCCACAATCTCGAGGCTCGCTCCGTCGTGAATGGCGCCCTTCTCATC
GACCTGCGCGCCCTGACAGCCGTCACGGTCGCCCCGGATCGTCAGTCCGC
TACCGTCCAGGGAGGTATTCTCCAAGGTGAACTGGCTAATATCCTCTGGG
AGGAAGGGCTGGTTACTCCGACCGGCTCTATCCCCAGCGTCGGATATGTC
GGCTGGGCCATGTATGGCGGCTATGGGCCCTTTTCGTCTCATTGGGGACT
GGGCGTTGATCAGATTCTGGGTGCTACGGTGGTGGATGCTAATGGGGAGA
TTGTTGTTGCTGATAAGTTCCTCCTAAGGGGTATCCGTGGTGCAGGAGGA
ATCTTCGGCATCATTGTTGACGTTACTATCAAGGTCTACTCCCTTCCAAA
GCTCCTCGCCGGCGCAATCATTTTCGACTCCTCCGACATCACTCAAACTA
TCATTACTTTCAACGCCGCCTATGAGAATCTCCTCAACACAGAGGGCCTC
CCTCCTCCACTGACCCTGCAACAAGTCGCCTTCAACAGTCCTCAGGGTCG
CGTATTCGCTGTGCTCTTTACATGGAGCCACCCCGACCTAGAGGAGGGCC
AACGATGGGCGGAGAGGATTTCCTCCCTCGCCCCGTTGCTCATGAGCACC
GTCGGCCCCACGACCGTCCCGGACTGGTTCACAGGTAATGGTGCCCTGGT
ACCCGAAGCTGTGTATGGGTCCCTCCAAACTCATAACGTCCGGCGCATCA
ATCCCGCCGTGGCGGAGGTGATTGCACGGAATGTGGCATCCATGCCGTCT
GATCCGGGCACGATGGCCACAATCCATCAGTTGCGGGGACAGTCTGCCGG
TGAAGACGCAGACAAGCTCGAGCATTCTGTCTTTGCGACGAGGGAGCCGC
ATTATATGCTTGAGTTTGTGGGATGTGCTACAGATAAGCAAAAGGCGGCG
GCATCTGAAGAGTGGGCAGTTAAACTGGCAGAGGAGATTGTGCAGGCCGA
TGAGGGGAATGTCTTGCCCACGGCGTATGTGTCTTTGATGAGATTCGCGA
GCCTGAAGCCGGAAGAGGCAGTCAAGAAGGCGTTTGGGGCCAATGCAGAG
GCGGTGCGCACGTTGAAGCAGAGGTTTGATCCGGAGAATGTGTTTGCGTT
GGCGCTGCCGGCGTTGAAGTAGATGACCGGTTCCAGCCAACTCACAGCCC
TGGAGGCCTTTCTCCTTTCGCATCCCAGCATCGGCTACATCCCGCCCACC
TCCGCCGAGTATGTGCCCACAGCCAACCGGGTGTTCATCGCCGGCATCAA
CGCCCGTCCACTGGCCATCGTGCAGCCCCAGTCTCCCGCAGATGTCGCAG
CACTCGTTAAATTCGCCAAGACCCACTCTGTACCCTTTACCGTTCGCTCG
GGCGGCCACAATCTCGAGGCTCGCTCCGTCGTGAATGGCGCCCTTCTCAT
CGACCTGCGCGCCCTGACAGCCGTCACGGTCGCCCCGGATCGTCAGTCCG
CTACCGTCCAGGGAGGTATTCTCCAAGGTGAACTGGCTAATATCCTCTGG
GAGGAAGGGCTGGTTACTCCGACCGGCTCTATCCCCAGCGTCGGATATGT
CGGCTGGGCCATGTATGGCGGCTATGGGCCCTTTTCGTCTCATTGGGGAC
TGGGCGTTGATCAGATTCTGGGTGCTACGGTGGTGGATGCTAATGGGGAG
ATTGTTGTTGCTGATAAGTTCCTCCTAAGGGGTATCCGTGGTGCAGGAGG
AATCTTCGGCATCATTGTTGACGTTACTATCAAGGTCTACTCCCTTCCAA
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_11620ATCC64974_11620Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11620-T1ATCC64974_11620-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11620-T1.cdsATCC64974_11620-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11620-T1.exon2ATCC64974_11620-T1.exon2Aspergillus niger N402exon
ATCC64974_11620-T1.exon1ATCC64974_11620-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.1
NoteEggNog:ENOG41
NoteSMCOG1138:FAD linked oxidase domain protein
NoteCAZy:AA7
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR016169
DBxrefInterPro:IPR012951
DBxrefInterPro:IPR016167
DBxrefInterPro:IPR006094
DBxrefPFAM:PF01565
DBxrefPFAM:PF08031
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:90329..91780 -
Powered by Drupal