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ATCC64974_11700-T1, ATCC64974_11700-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_11700-T1
Unique NameATCC64974_11700-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:116240..117535+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_11700-T1 ID=ATCC64974_11700-T1|Name=ATCC64974_11700-T1|organism=Aspergillus niger N402|type=mRNA|length=1296bp|location=Sequence derived from alignment at OGUI01000003.1:116240..117535+ (Aspergillus niger N402)
ATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTAAGTTACTGCGCCTCGACGCGCGATTCTTCGCATCTC
ACAATGAACAGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGACGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACTATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGATTT
GACATTGGCGATAGCACGTACATTACCATCACGGGCGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGGTGGGTAGACCGTCCT
TTAAGCTACGGATGTGGACACTGATGGGAACCAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGATTCGGATATCAA
GAGCTCTCAGAACGGTAAGTTATATTCCGTCAAGGTTGTAGTTCGGTGCG
ATCACATGCTAAGCGGCGTATAGGAGTCCGCATCAAGACCATCTACGGCG
ACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGAT
ATCACCGACTATGGCATTGTGGTGGAGCAGAACTATGACGATACGAGCGA
GTCGCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGC
AGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCA
GACAGCTGCACGGACTGGACTTGGACGGATGTGGATGTGACTGGAGGGAA
GACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:116240..117535+

>ATCC64974_11700-T1 ID=ATCC64974_11700-T1|Name=ATCC64974_11700-T1|organism=Aspergillus niger N402|type=CDS|length=4548bp|location=Sequence derived from alignment at OGUI01000003.1:116240..117535+ (Aspergillus niger N402)
ATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGACGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACTATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGATTT
GACATTGGCGATAGCACGTACATTACCATCACGGGCGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGATTCGGATATCAA
GAGCTCTCAGAACGGAGTCCGCATCAAGACCATCTACGGCGACACTGGGT
CGGTCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGATATCACCGAC
TATGGCATTGTGGTGGAGCAGAACTATGACGATACGAGCGAGTCGCCGAC
CGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTG
TGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCAGACAGCTGC
ACGGACTGGACTTGGACGGATGTGGATGTGACTGGAGGGAAGACCAGCTC
CGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAGATGGTGACTTCTA
GCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCC
GTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCGAGGATCTGGAGAA
GCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCA
GCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTG
CCCTCAGGCACCACGTTGGATCTGACCGATCTGAACGACGGGACTCACGT
CATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTC
TTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGGGGCCGACGGCGCC
TATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAATGG
CGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCA
CGATCAGCGGTATCTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATT
GACGGGTCGACGTATCTTACTATGGAGGACATCACCATTGACAACACGGA
TGGCGATGATGGCGAGGCGGCCAACACCGATGGATTTGACATTGGCGATA
GCACGTACATTACCATCACGGGCGCCAATGTATACAACCAAGATGACTGT
GTGGCGGTGAACTCGGGCGAGAACATTTACTTTTCGGGCGGCGTCTGCTC
TGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGTCGGAGTGACAACA
CCGTGAAGAACGTGACCTTCTACGATTCGGATATCAAGAGCTCTCAGAAC
GGAGTCCGCATCAAGACCATCTACGGCGACACTGGGTCGGTCAGTGAGGT
CACCTACAAGGAGATCACCCTGTCCGATATCACCGACTATGGCATTGTGG
TGGAGCAGAACTATGACGATACGAGCGAGTCGCCGACCGATGGAATCACC
ATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGG
CACCAACATCTACATCGTCTGCGGATCAGACAGCTGCACGGACTGGACTT
GGACGGATGTGGATGTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAAT
GTGCCGGACGATATCAGCTGTTAGATGGTGACTTCTAGCTCGGTGATCGG
CCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGC
TGGTGACCCCCGCCCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCC
TGCACTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGAC
CTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCA
CGTTGGATCTGACCGATCTGAACGACGGGACTCACGTCATCTTCGAAGGC
GAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTC
CGGAACTGACATCACCGTCACCGGGGCCGACGGCGCCTATCTCAACGGTG
ACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAATGGCGGCAAGACGAAG
CCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGTAT
CTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGT
ATCTTACTATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGC
GAGGCGGCCAACACCGATGGATTTGACATTGGCGATAGCACGTACATTAC
CATCACGGGCGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACT
CGGGCGAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGG
CTGTCGATCGGTTCCGTTGGCGGTCGGAGTGACAACACCGTGAAGAACGT
GACCTTCTACGATTCGGATATCAAGAGCTCTCAGAACGGAGTCCGCATCA
AGACCATCTACGGCGACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAG
ATCACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAGAACTA
TGACGATACGAGCGAGTCGCCGACCGATGGAATCACCATCGAAGACTTTG
TCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTAC
ATCGTCTGCGGATCAGACAGCTGCACGGACTGGACTTGGACGGATGTGGA
TGTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATA
TCAGCTGTTAGATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCTGG
GCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGC
CCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTCCG
GCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACC
ATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGAC
CGATCTGAACGACGGGACTCACGTCATCTTCGAAGGCGAAACCACCTTCG
GTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATC
ACCGTCACCGGGGCCGACGGCGCCTATCTCAACGGTGACGGCAGTCGTTG
GTGGGATGGCGAGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTTCTTCT
ACGCCCATGATCTGACCTCGTCCACGATCAGCGGTATCTACATCCAGAAC
TCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACTATGGA
GGACATCACCATTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACA
CCGATGGATTTGACATTGGCGATAGCACGTACATTACCATCACGGGCGCC
AATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGAACAT
TTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTT
CCGTTGGCGGTCGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGAT
TCGGATATCAAGAGCTCTCAGAACGGAGTCCGCATCAAGACCATCTACGG
CGACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCG
ATATCACCGACTATGGCATTGTGGTGGAGCAGAACTATGACGATACGAGC
GAGTCGCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGT
GCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGAT
CAGACAGCTGCACGGACTGGACTTGGACGGATGTGGATGTGACTGGAGGG
AAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_11700ATCC64974_11700Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11700-T1.exon1ATCC64974_11700-T1.exon1Aspergillus niger N402exon
ATCC64974_11700-T1.exon2ATCC64974_11700-T1.exon2Aspergillus niger N402exon
ATCC64974_11700-T1.exon3ATCC64974_11700-T1.exon3Aspergillus niger N402exon
ATCC64974_11700-T1.exon4ATCC64974_11700-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11700-T1.cdsATCC64974_11700-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11700-T1ATCC64974_11700-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:116240..117535 +
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