You are here

Home

ATCC64974_11950-T1, ATCC64974_11950-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_11950-T1
Unique NameATCC64974_11950-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:184564..185913+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_11950-T1 ID=ATCC64974_11950-T1|Name=ATCC64974_11950-T1|organism=Aspergillus niger N402|type=mRNA|length=1350bp|location=Sequence derived from alignment at OGUI01000003.1:184564..185913+ (Aspergillus niger N402)
ATGTCGCACTCCGATCATCAACCCACTTTCCCTGGCCCACCAGTGATTGT
GGCAGACGAAATTCCGACGGAAACACCAATTGACGCCGTGGTTTTATCAG
GTACGTAGTTGTATATCTACTTTGCTACACACTAGGATCTACTCATGGCA
AGAAATAACAGAAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCC
TTGGTTCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTCGAGGACCAA
GATCAGACAGAAAGCTATTTCTTGAAGGTAAACTTTCCCTATGGCATCTT
TTTCACTTTAAATGACACTACTACGCTTACTGCTCTACTAACCAGGCCCA
AAATAGATATCATTAGGGGTCCATGGCAAGGAAGCCCTCAGAGGGGAATT
CGAATCTACTTTAGCAATCCACAGCATAATTGGAAGCTTCACTCCTAAGC
CAAATGGATGGGGATCTTTCAAGGCACTTCCAGGCGTACATTATTATTTC
TGTCGATTCTATGAACTTGCAGAGCATGCCCCCAAGCCAGCTGAGTTTTG
CCAGATGGTCGCCTTTCTCCATTCGAGGAGCGAATCGCCAAACGGAAAAT
TCGGGTTTCACCTTGTGACATACAACGGCGATCTGCCCCAGGAGAATGGA
TACACTGACACATGGGAGGAATTCTTCAGAATTGGCTTTGAGCACATGAT
CGATATGAACATCGAGCGTGGTGGGGTATGGGCTGAGCTGGAAGGCTTAT
ATACTGCTATGATTGTCAAAGTCATTCCCCGCTTGTTAAGGCCAATGGAG
ACGGGAAGGCGGTCCATCAAGCCAGCCCTCGTCCACGGAGACCTGTGGTG
CGGAAATGCCGCTATCAATTCGGCCACCGGAAGGCCGTTGATATATGATC
CTGCCAGCTTCTATGCGCACAATGAGTGTATGCGCTTCTCTGCAAACCCA
GATGAATTGCACTGATATTACCCTCTAGATGAATTGGGCAATTGGCGTCC
TGAGAGAAATGGGTTTACGAGGAGTTACTTTGATGCCTATCATTCAATCA
TCCCAAAGACTGCCCCAACAGAAGACTATGATGACCGGATTGCACTATAT
TCAATGTAAGAGCCCATCCAGTTCTACTACTCTATGATAGCTCTTATGAG
GAACAGGCGCTTCAATTTACAGGCCGCGGCCCTCTTTCCCAAGGTTACTA
GCTTTCGAGACTCGTAAGTCGATTATCATGTGCATTGGCCCTCTTCGTTG
CTAATAGTACATCAGTGTCATCGAAGAAATGAGACGTCTGGTTACGAAGT
ACCCGGGAGGCTATGAGGAGTACGCCAGGACGTCTTGTATCAATATATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:184564..185913+

>ATCC64974_11950-T1 ID=ATCC64974_11950-T1|Name=ATCC64974_11950-T1|organism=Aspergillus niger N402|type=CDS|length=6336bp|location=Sequence derived from alignment at OGUI01000003.1:184564..185913+ (Aspergillus niger N402)
ATGTCGCACTCCGATCATCAACCCACTTTCCCTGGCCCACCAGTGATTGT
GGCAGACGAAATTCCGACGGAAACACCAATTGACGCCGTGGTTTTATCAG
AAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCCTTGGTTCTTCA
GCCTGGGCTCAAAGATATCGGATTGATGTCGAGGACCAAGATCAGACAGA
AAGCTATTTCTTGAAGATATCATTAGGGGTCCATGGCAAGGAAGCCCTCA
GAGGGGAATTCGAATCTACTTTAGCAATCCACAGCATAATTGGAAGCTTC
ACTCCTAAGCCAAATGGATGGGGATCTTTCAAGGCACTTCCAGGCGTACA
TTATTATTTCTGTCGATTCTATGAACTTGCAGAGCATGCCCCCAAGCCAG
CTGAGTTTTGCCAGATGGTCGCCTTTCTCCATTCGAGGAGCGAATCGCCA
AACGGAAAATTCGGGTTTCACCTTGTGACATACAACGGCGATCTGCCCCA
GGAGAATGGATACACTGACACATGGGAGGAATTCTTCAGAATTGGCTTTG
AGCACATGATCGATATGAACATCGAGCGTGGTGGGGTATGGGCTGAGCTG
GAAGGCTTATATACTGCTATGATTGTCAAAGTCATTCCCCGCTTGTTAAG
GCCAATGGAGACGGGAAGGCGGTCCATCAAGCCAGCCCTCGTCCACGGAG
ACCTGTGGTGCGGAAATGCCGCTATCAATTCGGCCACCGGAAGGCCGTTG
ATATATGATCCTGCCAGCTTCTATGCGCACAATGAGTATGAATTGGGCAA
TTGGCGTCCTGAGAGAAATGGGTTTACGAGGAGTTACTTTGATGCCTATC
ATTCAATCATCCCAAAGACTGCCCCAACAGAAGACTATGATGACCGGATT
GCACTATATTCAATGCGCTTCAATTTACAGGCCGCGGCCCTCTTTCCCAA
GGTTACTAGCTTTCGAGACTCTGTCATCGAAGAAATGAGACGTCTGGTTA
CGAAGTACCCGGGAGGCTATGAGGAGTACGCCAGGACGTCTTGTATCAAT
ATATAAATGTCGCACTCCGATCATCAACCCACTTTCCCTGGCCCACCAGT
GATTGTGGCAGACGAAATTCCGACGGAAACACCAATTGACGCCGTGGTTT
TATCAGAAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCCTTGGT
TCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTCGAGGACCAAGATCA
GACAGAAAGCTATTTCTTGAAGATATCATTAGGGGTCCATGGCAAGGAAG
CCCTCAGAGGGGAATTCGAATCTACTTTAGCAATCCACAGCATAATTGGA
AGCTTCACTCCTAAGCCAAATGGATGGGGATCTTTCAAGGCACTTCCAGG
CGTACATTATTATTTCTGTCGATTCTATGAACTTGCAGAGCATGCCCCCA
AGCCAGCTGAGTTTTGCCAGATGGTCGCCTTTCTCCATTCGAGGAGCGAA
TCGCCAAACGGAAAATTCGGGTTTCACCTTGTGACATACAACGGCGATCT
GCCCCAGGAGAATGGATACACTGACACATGGGAGGAATTCTTCAGAATTG
GCTTTGAGCACATGATCGATATGAACATCGAGCGTGGTGGGGTATGGGCT
GAGCTGGAAGGCTTATATACTGCTATGATTGTCAAAGTCATTCCCCGCTT
GTTAAGGCCAATGGAGACGGGAAGGCGGTCCATCAAGCCAGCCCTCGTCC
ACGGAGACCTGTGGTGCGGAAATGCCGCTATCAATTCGGCCACCGGAAGG
CCGTTGATATATGATCCTGCCAGCTTCTATGCGCACAATGAGTATGAATT
GGGCAATTGGCGTCCTGAGAGAAATGGGTTTACGAGGAGTTACTTTGATG
CCTATCATTCAATCATCCCAAAGACTGCCCCAACAGAAGACTATGATGAC
CGGATTGCACTATATTCAATGCGCTTCAATTTACAGGCCGCGGCCCTCTT
TCCCAAGGTTACTAGCTTTCGAGACTCTGTCATCGAAGAAATGAGACGTC
TGGTTACGAAGTACCCGGGAGGCTATGAGGAGTACGCCAGGACGTCTTGT
ATCAATATATAAATGTCGCACTCCGATCATCAACCCACTTTCCCTGGCCC
ACCAGTGATTGTGGCAGACGAAATTCCGACGGAAACACCAATTGACGCCG
TGGTTTTATCAGAAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGC
CTTGGTTCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTCGAGGACCA
AGATCAGACAGAAAGCTATTTCTTGAAGATATCATTAGGGGTCCATGGCA
AGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCAATCCACAGCATA
ATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGGATCTTTCAAGGCACT
TCCAGGCGTACATTATTATTTCTGTCGATTCTATGAACTTGCAGAGCATG
CCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTTCTCCATTCGAGG
AGCGAATCGCCAAACGGAAAATTCGGGTTTCACCTTGTGACATACAACGG
CGATCTGCCCCAGGAGAATGGATACACTGACACATGGGAGGAATTCTTCA
GAATTGGCTTTGAGCACATGATCGATATGAACATCGAGCGTGGTGGGGTA
TGGGCTGAGCTGGAAGGCTTATATACTGCTATGATTGTCAAAGTCATTCC
CCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCATCAAGCCAGCCC
TCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCTATCAATTCGGCCACC
GGAAGGCCGTTGATATATGATCCTGCCAGCTTCTATGCGCACAATGAGTA
TGAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTTACGAGGAGTTACT
TTGATGCCTATCATTCAATCATCCCAAAGACTGCCCCAACAGAAGACTAT
GATGACCGGATTGCACTATATTCAATGCGCTTCAATTTACAGGCCGCGGC
CCTCTTTCCCAAGGTTACTAGCTTTCGAGACTCTGTCATCGAAGAAATGA
GACGTCTGGTTACGAAGTACCCGGGAGGCTATGAGGAGTACGCCAGGACG
TCTTGTATCAATATATAAATGTCGCACTCCGATCATCAACCCACTTTCCC
TGGCCCACCAGTGATTGTGGCAGACGAAATTCCGACGGAAACACCAATTG
ACGCCGTGGTTTTATCAGAAATCGGGCTGTTTCGCCGTCCTTTACAAGTG
GTGAGCCTTGGTTCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTCGA
GGACCAAGATCAGACAGAAAGCTATTTCTTGAAGATATCATTAGGGGTCC
ATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCAATCCAC
AGCATAATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGGATCTTTCAA
GGCACTTCCAGGCGTACATTATTATTTCTGTCGATTCTATGAACTTGCAG
AGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTTCTCCAT
TCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCACCTTGTGACATA
CAACGGCGATCTGCCCCAGGAGAATGGATACACTGACACATGGGAGGAAT
TCTTCAGAATTGGCTTTGAGCACATGATCGATATGAACATCGAGCGTGGT
GGGGTATGGGCTGAGCTGGAAGGCTTATATACTGCTATGATTGTCAAAGT
CATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCATCAAGC
CAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCTATCAATTCG
GCCACCGGAAGGCCGTTGATATATGATCCTGCCAGCTTCTATGCGCACAA
TGAGTATGAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTTACGAGGA
GTTACTTTGATGCCTATCATTCAATCATCCCAAAGACTGCCCCAACAGAA
GACTATGATGACCGGATTGCACTATATTCAATGCGCTTCAATTTACAGGC
CGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAGACTCTGTCATCGAAG
AAATGAGACGTCTGGTTACGAAGTACCCGGGAGGCTATGAGGAGTACGCC
AGGACGTCTTGTATCAATATATAAATGTCGCACTCCGATCATCAACCCAC
TTTCCCTGGCCCACCAGTGATTGTGGCAGACGAAATTCCGACGGAAACAC
CAATTGACGCCGTGGTTTTATCAGAAATCGGGCTGTTTCGCCGTCCTTTA
CAAGTGGTGAGCCTTGGTTCTTCAGCCTGGGCTCAAAGATATCGGATTGA
TGTCGAGGACCAAGATCAGACAGAAAGCTATTTCTTGAAGATATCATTAG
GGGTCCATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCA
ATCCACAGCATAATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGGATC
TTTCAAGGCACTTCCAGGCGTACATTATTATTTCTGTCGATTCTATGAAC
TTGCAGAGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTT
CTCCATTCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCACCTTGT
GACATACAACGGCGATCTGCCCCAGGAGAATGGATACACTGACACATGGG
AGGAATTCTTCAGAATTGGCTTTGAGCACATGATCGATATGAACATCGAG
CGTGGTGGGGTATGGGCTGAGCTGGAAGGCTTATATACTGCTATGATTGT
CAAAGTCATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCA
TCAAGCCAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCTATC
AATTCGGCCACCGGAAGGCCGTTGATATATGATCCTGCCAGCTTCTATGC
GCACAATGAGTATGAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTTA
CGAGGAGTTACTTTGATGCCTATCATTCAATCATCCCAAAGACTGCCCCA
ACAGAAGACTATGATGACCGGATTGCACTATATTCAATGCGCTTCAATTT
ACAGGCCGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAGACTCTGTCA
TCGAAGAAATGAGACGTCTGGTTACGAAGTACCCGGGAGGCTATGAGGAG
TACGCCAGGACGTCTTGTATCAATATATAAATGTCGCACTCCGATCATCA
ACCCACTTTCCCTGGCCCACCAGTGATTGTGGCAGACGAAATTCCGACGG
AAACACCAATTGACGCCGTGGTTTTATCAGAAATCGGGCTGTTTCGCCGT
CCTTTACAAGTGGTGAGCCTTGGTTCTTCAGCCTGGGCTCAAAGATATCG
GATTGATGTCGAGGACCAAGATCAGACAGAAAGCTATTTCTTGAAGATAT
CATTAGGGGTCCATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACT
TTAGCAATCCACAGCATAATTGGAAGCTTCACTCCTAAGCCAAATGGATG
GGGATCTTTCAAGGCACTTCCAGGCGTACATTATTATTTCTGTCGATTCT
ATGAACTTGCAGAGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTC
GCCTTTCTCCATTCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCA
CCTTGTGACATACAACGGCGATCTGCCCCAGGAGAATGGATACACTGACA
CATGGGAGGAATTCTTCAGAATTGGCTTTGAGCACATGATCGATATGAAC
ATCGAGCGTGGTGGGGTATGGGCTGAGCTGGAAGGCTTATATACTGCTAT
GATTGTCAAAGTCATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGC
GGTCCATCAAGCCAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCC
GCTATCAATTCGGCCACCGGAAGGCCGTTGATATATGATCCTGCCAGCTT
CTATGCGCACAATGAGTATGAATTGGGCAATTGGCGTCCTGAGAGAAATG
GGTTTACGAGGAGTTACTTTGATGCCTATCATTCAATCATCCCAAAGACT
GCCCCAACAGAAGACTATGATGACCGGATTGCACTATATTCAATGCGCTT
CAATTTACAGGCCGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAGACT
CTGTCATCGAAGAAATGAGACGTCTGGTTACGAAGTACCCGGGAGGCTAT
GAGGAGTACGCCAGGACGTCTTGTATCAATATATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_11950ATCC64974_11950Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11950-T1ATCC64974_11950-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11950-T1.exon1ATCC64974_11950-T1.exon1Aspergillus niger N402exon
ATCC64974_11950-T1.exon2ATCC64974_11950-T1.exon2Aspergillus niger N402exon
ATCC64974_11950-T1.exon3ATCC64974_11950-T1.exon3Aspergillus niger N402exon
ATCC64974_11950-T1.exon4ATCC64974_11950-T1.exon4Aspergillus niger N402exon
ATCC64974_11950-T1.exon5ATCC64974_11950-T1.exon5Aspergillus niger N402exon
ATCC64974_11950-T1.exon6ATCC64974_11950-T1.exon6Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11950-T1.cdsATCC64974_11950-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR016477
DBxrefPFAM:PF03881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:184564..185913 +
Powered by Drupal