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ATCC64974_12530-T1, ATCC64974_12530-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_12530-T1
Unique NameATCC64974_12530-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:369004..369958-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_12530-T1 ID=ATCC64974_12530-T1|Name=ATCC64974_12530-T1|organism=Aspergillus niger N402|type=mRNA|length=955bp|location=Sequence derived from alignment at OGUI01000003.1:369004..369958- (Aspergillus niger N402)
ATGAGCCACCCTTCTCCCCAGAAGAACGGCGGCAATAATGTTCCCCCTCC
CAGACAAATCCGCTTCGTTTCAACAGATGGGCAGCCCCAAACCAAGCGGC
GACGAGTTAATGCGGCGTAAGTTGTCATGCCCTTTCTTTCCTCCCCATGC
CTCCGGTCTGCTCATCCTGTGATGAATCTAACCTGATCGCTCCCCCGTGG
GGCCAACGATAGATGTCTGACGTGTCGCAAGCGCAAAATCCGCTGCTCCG
GCGAACAACCAGGTAACCACCAGCCTGATGTCTGACTTATCATGGCCATT
GTTTGACTCACCTGCTCGCATGCTTAGTGTGCAAAACATGTTCCGATTAC
AACCATATCTGCCAAGGGTACAGCGAACCGTCTGCCCACGCCCGGTCCCA
ATCCGATGCCGCATCACGAACTCCTACAATTGCCCCTCTACCGACTCCCG
GTGATGCGACAGCCTTGCGCGCGGCGCGGAAGGCCGCAAGTCGCTCCCCT
AGTTCTCCGCGCCGAACCATAGTGCCAATCACTGACGGTGTGGATAAGCC
CTCCGAAGCACTCAAACCGTTGGAGCCGAAGGAAGAACCACTGCCGACAG
ACACATCCTCGCGAACAACAAAAGAGTTCGAGCAACCGAACAACGGGGCC
AGTCCAGAAAGCAGTACGTTATTGGGTCTTTTCTGGCTTTTCAAATGCCT
TGTATGGGTGGCCATGGCTCACCAGGCTCTTTATCGTCTAGGTCGCACCT
CGCTAAGTAGCAGCGCACGCACTCATGTGCCCTACTTTAGGTATTTTGGG
CCAACAGCTATTGTCCCTGGCTTCAAACAGATGGTTCGCACACATATGTC
AAGAGGATTCTCCAAATTTGTGTCGGTTAACGCCCCCCGCAGGTCGTCCA
GGTGCGAGGTTCGCGCAAGAGCAATCCGTCACTGTCATCAGGTCTGCACT
CCTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:369004..369958-

>ATCC64974_12530-T1 ID=ATCC64974_12530-T1|Name=ATCC64974_12530-T1|organism=Aspergillus niger N402|type=CDS|length=3285bp|location=Sequence derived from alignment at OGUI01000003.1:369004..369958- (Aspergillus niger N402)
GTCGTCCAGGTGCGAGGTTCGCGCAAGAGCAATCCGTCACTGTCATCAGG
TCTGCACTCCTGAGTCGCACCTCGCTAAGTAGCAGCGCACGCACTCATGT
GCCCTACTTTAGGTATTTTGGGCCAACAGCTATTGTCCCTGGCTTCAAAC
AGATGTGTGCAAAACATGTTCCGATTACAACCATATCTGCCAAGGGTACA
GCGAACCGTCTGCCCACGCCCGGTCCCAATCCGATGCCGCATCACGAACT
CCTACAATTGCCCCTCTACCGACTCCCGGTGATGCGACAGCCTTGCGCGC
GGCGCGGAAGGCCGCAAGTCGCTCCCCTAGTTCTCCGCGCCGAACCATAG
TGCCAATCACTGACGGTGTGGATAAGCCCTCCGAAGCACTCAAACCGTTG
GAGCCGAAGGAAGAACCACTGCCGACAGACACATCCTCGCGAACAACAAA
AGAGTTCGAGCAACCGAACAACGGGGCCAGTCCAGAAAGCAATGTCTGAC
GTGTCGCAAGCGCAAAATCCGCTGCTCCGGCGAACAACCAGATGAGCCAC
CCTTCTCCCCAGAAGAACGGCGGCAATAATGTTCCCCCTCCCAGACAAAT
CCGCTTCGTTTCAACAGATGGGCAGCCCCAAACCAAGCGGCGACGAGTTA
ATGCGGCGTCGTCCAGGTGCGAGGTTCGCGCAAGAGCAATCCGTCACTGT
CATCAGGTCTGCACTCCTGAGTCGCACCTCGCTAAGTAGCAGCGCACGCA
CTCATGTGCCCTACTTTAGGTATTTTGGGCCAACAGCTATTGTCCCTGGC
TTCAAACAGATGTGTGCAAAACATGTTCCGATTACAACCATATCTGCCAA
GGGTACAGCGAACCGTCTGCCCACGCCCGGTCCCAATCCGATGCCGCATC
ACGAACTCCTACAATTGCCCCTCTACCGACTCCCGGTGATGCGACAGCCT
TGCGCGCGGCGCGGAAGGCCGCAAGTCGCTCCCCTAGTTCTCCGCGCCGA
ACCATAGTGCCAATCACTGACGGTGTGGATAAGCCCTCCGAAGCACTCAA
ACCGTTGGAGCCGAAGGAAGAACCACTGCCGACAGACACATCCTCGCGAA
CAACAAAAGAGTTCGAGCAACCGAACAACGGGGCCAGTCCAGAAAGCAAT
GTCTGACGTGTCGCAAGCGCAAAATCCGCTGCTCCGGCGAACAACCAGAT
GAGCCACCCTTCTCCCCAGAAGAACGGCGGCAATAATGTTCCCCCTCCCA
GACAAATCCGCTTCGTTTCAACAGATGGGCAGCCCCAAACCAAGCGGCGA
CGAGTTAATGCGGCGTCGTCCAGGTGCGAGGTTCGCGCAAGAGCAATCCG
TCACTGTCATCAGGTCTGCACTCCTGAGTCGCACCTCGCTAAGTAGCAGC
GCACGCACTCATGTGCCCTACTTTAGGTATTTTGGGCCAACAGCTATTGT
CCCTGGCTTCAAACAGATGTGTGCAAAACATGTTCCGATTACAACCATAT
CTGCCAAGGGTACAGCGAACCGTCTGCCCACGCCCGGTCCCAATCCGATG
CCGCATCACGAACTCCTACAATTGCCCCTCTACCGACTCCCGGTGATGCG
ACAGCCTTGCGCGCGGCGCGGAAGGCCGCAAGTCGCTCCCCTAGTTCTCC
GCGCCGAACCATAGTGCCAATCACTGACGGTGTGGATAAGCCCTCCGAAG
CACTCAAACCGTTGGAGCCGAAGGAAGAACCACTGCCGACAGACACATCC
TCGCGAACAACAAAAGAGTTCGAGCAACCGAACAACGGGGCCAGTCCAGA
AAGCAATGTCTGACGTGTCGCAAGCGCAAAATCCGCTGCTCCGGCGAACA
ACCAGATGAGCCACCCTTCTCCCCAGAAGAACGGCGGCAATAATGTTCCC
CCTCCCAGACAAATCCGCTTCGTTTCAACAGATGGGCAGCCCCAAACCAA
GCGGCGACGAGTTAATGCGGCGTCGTCCAGGTGCGAGGTTCGCGCAAGAG
CAATCCGTCACTGTCATCAGGTCTGCACTCCTGAGTCGCACCTCGCTAAG
TAGCAGCGCACGCACTCATGTGCCCTACTTTAGGTATTTTGGGCCAACAG
CTATTGTCCCTGGCTTCAAACAGATGTGTGCAAAACATGTTCCGATTACA
ACCATATCTGCCAAGGGTACAGCGAACCGTCTGCCCACGCCCGGTCCCAA
TCCGATGCCGCATCACGAACTCCTACAATTGCCCCTCTACCGACTCCCGG
TGATGCGACAGCCTTGCGCGCGGCGCGGAAGGCCGCAAGTCGCTCCCCTA
GTTCTCCGCGCCGAACCATAGTGCCAATCACTGACGGTGTGGATAAGCCC
TCCGAAGCACTCAAACCGTTGGAGCCGAAGGAAGAACCACTGCCGACAGA
CACATCCTCGCGAACAACAAAAGAGTTCGAGCAACCGAACAACGGGGCCA
GTCCAGAAAGCAATGTCTGACGTGTCGCAAGCGCAAAATCCGCTGCTCCG
GCGAACAACCAGATGAGCCACCCTTCTCCCCAGAAGAACGGCGGCAATAA
TGTTCCCCCTCCCAGACAAATCCGCTTCGTTTCAACAGATGGGCAGCCCC
AAACCAAGCGGCGACGAGTTAATGCGGCGTCGTCCAGGTGCGAGGTTCGC
GCAAGAGCAATCCGTCACTGTCATCAGGTCTGCACTCCTGAGTCGCACCT
CGCTAAGTAGCAGCGCACGCACTCATGTGCCCTACTTTAGGTATTTTGGG
CCAACAGCTATTGTCCCTGGCTTCAAACAGATGTGTGCAAAACATGTTCC
GATTACAACCATATCTGCCAAGGGTACAGCGAACCGTCTGCCCACGCCCG
GTCCCAATCCGATGCCGCATCACGAACTCCTACAATTGCCCCTCTACCGA
CTCCCGGTGATGCGACAGCCTTGCGCGCGGCGCGGAAGGCCGCAAGTCGC
TCCCCTAGTTCTCCGCGCCGAACCATAGTGCCAATCACTGACGGTGTGGA
TAAGCCCTCCGAAGCACTCAAACCGTTGGAGCCGAAGGAAGAACCACTGC
CGACAGACACATCCTCGCGAACAACAAAAGAGTTCGAGCAACCGAACAAC
GGGGCCAGTCCAGAAAGCAATGTCTGACGTGTCGCAAGCGCAAAATCCGC
TGCTCCGGCGAACAACCAGATGAGCCACCCTTCTCCCCAGAAGAACGGCG
GCAATAATGTTCCCCCTCCCAGACAAATCCGCTTCGTTTCAACAGATGGG
CAGCCCCAAACCAAGCGGCGACGAGTTAATGCGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_12530ATCC64974_12530Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12530-T1ATCC64974_12530-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12530-T1.cdsATCC64974_12530-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12530-T1.exon5ATCC64974_12530-T1.exon5Aspergillus niger N402exon
ATCC64974_12530-T1.exon4ATCC64974_12530-T1.exon4Aspergillus niger N402exon
ATCC64974_12530-T1.exon3ATCC64974_12530-T1.exon3Aspergillus niger N402exon
ATCC64974_12530-T1.exon2ATCC64974_12530-T1.exon2Aspergillus niger N402exon
ATCC64974_12530-T1.exon1ATCC64974_12530-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:369004..369958 -
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