You are here

Home

ATCC64974_12540-T1, ATCC64974_12540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_12540-T1
Unique NameATCC64974_12540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:371834..372881-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_12540-T1 ID=ATCC64974_12540-T1|Name=ATCC64974_12540-T1|organism=Aspergillus niger N402|type=mRNA|length=1048bp|location=Sequence derived from alignment at OGUI01000003.1:371834..372881- (Aspergillus niger N402)
ATGTCAGGACAAAAAAGTGTCCTTGCCATCCTCATGCGACGCTCCGTCTT
CTCTACCGTTTCCTTTGCTTTCAAGCAACCTGTCAAGTTTCAGTAAGTCC
AGGAGTCTCCCTATCCCCGACGGTCATCGATCCACGGGGGGTCGGTGCCG
GCGACCCCACGGTTAACCCTTGCGCATACTAACATCAGGCAGTAGCTGCA
GGATCCCATCTCGTCGCCTAAACCTCTACAGCCCCTCTCGAGCGTTTAGC
CAAACATCCACCATGTTCAAAGTCGGTGACGATTTTGAAAAGAAACAAGC
CTCCCGGCCAGAGTTCAAGCGTGACGTCCCCGTCACTTTCTCGCAGCCAC
CGAACCCCAGCTGGAAACAGGGAGAGGGCGCCAACGATGGCGGTGAGAGC
TTGAAAAAAAACCACATCGAGATCGACCCTTACGAAGAAGGCCGACCGGC
CGCCTCCAACTATAAGCTGTTGATCTCGGGCATAGTCCCTCGTCCGATTG
CGCTCATTAGCACAAAGTCCAAAGATGGAAAGACGACAAACTTGGCACCG
TTCAGTTATTCGAATGTCATTAACCATGACCCTCCGCTCTTCACGGTCGG
AATTGTTGGCTCCCTGGACAAGGCCAAAGACACACTGAAGAACCTGGCGG
AGACGGAGGAGTGTGTGATCAACATCATCTCGGAGCATTTTGTCGAAGCT
GCCAATGCGACGGCCATCAACGCTCCCTATGGAGTGTCCGAATGGGAAGT
CTCCGGGCTCACCCAAGCACCCAGTGCCGTTGTTCAGGCGGCCCGTGTGA
AAGAGTCCATCCTGGCGATCGAAGGCAAGCTGGTGGAAACCAAGGAGTTC
GAGAGCCGGTCTACTCCTGGCAAGAAATCCGGAGTGTTGGCAATAATCGA
GGGTGTTCGTTTCTGGGTGAGAGATGATGCGATCAACGAAGACAAGAGCA
TTGTCGATCTGAAAGTGCTGAAGCCTATTAGTCGGCTGGGAGGCATTTCG
TACGGGCGGACCACCGACGCAATCGAAATTCCAAGACCGCAGTTCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:371834..372881-

>ATCC64974_12540-T1 ID=ATCC64974_12540-T1|Name=ATCC64974_12540-T1|organism=Aspergillus niger N402|type=CDS|length=1896bp|location=Sequence derived from alignment at OGUI01000003.1:371834..372881- (Aspergillus niger N402)
TAGCTGCAGGATCCCATCTCGTCGCCTAAACCTCTACAGCCCCTCTCGAG
CGTTTAGCCAAACATCCACCATGTTCAAAGTCGGTGACGATTTTGAAAAG
AAACAAGCCTCCCGGCCAGAGTTCAAGCGTGACGTCCCCGTCACTTTCTC
GCAGCCACCGAACCCCAGCTGGAAACAGGGAGAGGGCGCCAACGATGGCG
GTGAGAGCTTGAAAAAAAACCACATCGAGATCGACCCTTACGAAGAAGGC
CGACCGGCCGCCTCCAACTATAAGCTGTTGATCTCGGGCATAGTCCCTCG
TCCGATTGCGCTCATTAGCACAAAGTCCAAAGATGGAAAGACGACAAACT
TGGCACCGTTCAGTTATTCGAATGTCATTAACCATGACCCTCCGCTCTTC
ACGGTCGGAATTGTTGGCTCCCTGGACAAGGCCAAAGACACACTGAAGAA
CCTGGCGGAGACGGAGGAGTGTGTGATCAACATCATCTCGGAGCATTTTG
TCGAAGCTGCCAATGCGACGGCCATCAACGCTCCCTATGGAGTGTCCGAA
TGGGAAGTCTCCGGGCTCACCCAAGCACCCAGTGCCGTTGTTCAGGCGGC
CCGTGTGAAAGAGTCCATCCTGGCGATCGAAGGCAAGCTGGTGGAAACCA
AGGAGTTCGAGAGCCGGTCTACTCCTGGCAAGAAATCCGGAGTGTTGGCA
ATAATCGAGGGTGTTCGTTTCTGGGTGAGAGATGATGCGATCAACGAAGA
CAAGAGCATTGTCGATCTGAAAGTGCTGAAGCCTATTAGTCGGCTGGGAG
GCATTTCGTACGGGCGGACCACCGACGCAATCGAAATTCCAAGACCGCAG
TTCTAGATGTCAGGACAAAAAAGTGTCCTTGCCATCCTCATGCGACGCTC
CGTCTTCTCTACCGTTTCCTTTGCTTTCAAGCAACCTGTCAAGTTTCATA
GCTGCAGGATCCCATCTCGTCGCCTAAACCTCTACAGCCCCTCTCGAGCG
TTTAGCCAAACATCCACCATGTTCAAAGTCGGTGACGATTTTGAAAAGAA
ACAAGCCTCCCGGCCAGAGTTCAAGCGTGACGTCCCCGTCACTTTCTCGC
AGCCACCGAACCCCAGCTGGAAACAGGGAGAGGGCGCCAACGATGGCGGT
GAGAGCTTGAAAAAAAACCACATCGAGATCGACCCTTACGAAGAAGGCCG
ACCGGCCGCCTCCAACTATAAGCTGTTGATCTCGGGCATAGTCCCTCGTC
CGATTGCGCTCATTAGCACAAAGTCCAAAGATGGAAAGACGACAAACTTG
GCACCGTTCAGTTATTCGAATGTCATTAACCATGACCCTCCGCTCTTCAC
GGTCGGAATTGTTGGCTCCCTGGACAAGGCCAAAGACACACTGAAGAACC
TGGCGGAGACGGAGGAGTGTGTGATCAACATCATCTCGGAGCATTTTGTC
GAAGCTGCCAATGCGACGGCCATCAACGCTCCCTATGGAGTGTCCGAATG
GGAAGTCTCCGGGCTCACCCAAGCACCCAGTGCCGTTGTTCAGGCGGCCC
GTGTGAAAGAGTCCATCCTGGCGATCGAAGGCAAGCTGGTGGAAACCAAG
GAGTTCGAGAGCCGGTCTACTCCTGGCAAGAAATCCGGAGTGTTGGCAAT
AATCGAGGGTGTTCGTTTCTGGGTGAGAGATGATGCGATCAACGAAGACA
AGAGCATTGTCGATCTGAAAGTGCTGAAGCCTATTAGTCGGCTGGGAGGC
ATTTCGTACGGGCGGACCACCGACGCAATCGAAATTCCAAGACCGCAGTT
CTAGATGTCAGGACAAAAAAGTGTCCTTGCCATCCTCATGCGACGCTCCG
TCTTCTCTACCGTTTCCTTTGCTTTCAAGCAACCTGTCAAGTTTCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0048037obsolete cofactor binding
GO:0010181FMN binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_12540ATCC64974_12540Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12540-T1ATCC64974_12540-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12540-T1.cdsATCC64974_12540-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12540-T1.exon2ATCC64974_12540-T1.exon2Aspergillus niger N402exon
ATCC64974_12540-T1.exon1ATCC64974_12540-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012349
DBxrefInterPro:IPR002563
DBxrefPFAM:PF01613
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:371834..372881 -
Powered by Drupal