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ATCC64974_13010-T1, ATCC64974_13010-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_13010-T1
Unique NameATCC64974_13010-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:533914..535597+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_13010-T1 ID=ATCC64974_13010-T1|Name=ATCC64974_13010-T1|organism=Aspergillus niger N402|type=mRNA|length=1684bp|location=Sequence derived from alignment at OGUI01000003.1:533914..535597+ (Aspergillus niger N402)
ATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGATGCTCCCTC
GACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTTCTGAACCCC
CTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACATGTCTTGTTG
TCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGGCAACTCGTC
GGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTGCCTTTGGAT
CCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTCTTCAAATAC
ACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACCGGGTGAATT
CGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCTTGGAGACGA
TGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGGTAAGTCACTG
GCTCTTTGTCCGCTCCTTTGGGCAAACGACGACCATGGGGTCTTGTAAGA
CATGACGTATGTGCATTTGTCGCTGATCTCTCACATAGCATTTATCGAAG
CCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTCTCAGTTCCTC
GCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAACCAGAGTTGGA
AATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAGTTCTACGACT
CGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACAGAATGACGTC
TATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATACTCTTATCAG
TATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTACCAGGTGCGT
TCTTGGACAACTTGTTGGGGGGAGGATATGGGTTGTCCGCGGTCGCTAAT
TTTGTTTCTTATGATGTCAGGCTTCCACAAGACTTCGGTCGCATACCAGT
CCACCGGTCATAGGAGGCACAACCAGCCATTTGCACCAACACCGTACGGT
CCTCACCTTTTGCAAGGTGATGTGATCGGTGTGGGGTATCGACCACGCTC
GGGTACAATTTTCTTCACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCC
ACGGTCATAAAGCGCAGAATTTCTTCCCCACTGTTGGAGCCAATGGGCCT
TGCTCCGTCCATGTGAACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGC
CAACGTCAAGAAATGGGGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGC
CTCCGCCTTACGGCAGCGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGG
GAGAGTGCAGCTCAGATTTCTCAACGGGTCTATCAGGATGCCAATAATGC
GCGCACCAGTTCGACTGTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTG
TGCGATCACCCACCGATATATCCCTGGCTCAGCTTGCCCACATCCCGTCG
AACGAGGACGTAGGCGAAGGATCCAGTCGGACCAATGTCGTCGATGGAGA
GCAAGTCCCCTTGTTGCATACGAACGATCTCGACCAAGTCCCGCCTCCCG
AATATTCCAGCCCGGATGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTT
GACGAACAGCCTCCGATACCCAGCTACGACGCTGCTGTTGGCAACCGGGA
CGGTCACAGCGCGCATGCCAACGAGAATCGTTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:533914..535597+

>ATCC64974_13010-T1 ID=ATCC64974_13010-T1|Name=ATCC64974_13010-T1|organism=Aspergillus niger N402|type=CDS|length=4527bp|location=Sequence derived from alignment at OGUI01000003.1:533914..535597+ (Aspergillus niger N402)
ATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGATGCTCCCTC
GACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTTCTGAACCCC
CTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACATGTCTTGTTG
TCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGGCAACTCGTC
GGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTGCCTTTGGAT
CCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTCTTCAAATAC
ACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACCGGGTGAATT
CGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCTTGGAGACGA
TGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGCATTTATCGAA
GCCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTCTCAGTTCCT
CGCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAACCAGAGTTGG
AAATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAGTTCTACGAC
TCGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACAGAATGACGT
CTATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATACTCTTATCA
GTATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTACCAGGCTTC
CACAAGACTTCGGTCGCATACCAGTCCACCGGTCATAGGAGGCACAACCA
GCCATTTGCACCAACACCGTACGGTCCTCACCTTTTGCAAGGTGATGTGA
TCGGTGTGGGGTATCGACCACGCTCGGGTACAATTTTCTTCACTCGCAAT
GGCAAGAAGCTGGAGGACGTTGTCCACGGTCATAAAGCGCAGAATTTCTT
CCCCACTGTTGGAGCCAATGGGCCTTGCTCCGTCCATGTGAACTTTGGTC
AGATGGGCTTCGTGTTCATTGAGGCCAACGTCAAGAAATGGGGCCTGGCC
CCGATGACTGGTAGTCTGGCTCCGCCTCCGCCTTACGGCAGCGAGCAAGG
CAGCATCCTGCTAGAGTCGGGTCGGGAGAGTGCAGCTCAGATTTCTCAAC
GGGTCTATCAGGATGCCAATAATGCGCGCACCAGTTCGACTGTCCGTGTT
GCGCCTTCTGCCAGTCCCGGCCCTGTGCGATCACCCACCGATATATCCCT
GGCTCAGCTTGCCCACATCCCGTCGAACGAGGACGTAGGCGAAGGATCCA
GTCGGACCAATGTCGTCGATGGAGAGCAAGTCCCCTTGTTGCATACGAAC
GATCTCGACCAAGTCCCGCCTCCCGAATATTCCAGCCCGGATGGCAGTCG
GAGAGGCAGCGAGGATCTGCCCTTTGACGAACAGCCTCCGATACCCAGCT
ACGACGCTGCTGTTGGCAACCGGGACGGTCACAGCGCGCATGCCAACGAG
AATCGTTAGATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGA
TGCTCCCTCGACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTT
CTGAACCCCCTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACAT
GTCTTGTTGTCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGG
CAACTCGTCGGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTG
CCTTTGGATCCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTC
TTCAAATACACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACC
GGGTGAATTCGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCT
TGGAGACGATGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGCA
TTTATCGAAGCCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTC
TCAGTTCCTCGCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAAC
CAGAGTTGGAAATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAG
TTCTACGACTCGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACA
GAATGACGTCTATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATA
CTCTTATCAGTATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTA
CCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGGTCATAGGAG
GCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACCTTTTGCAAG
GTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACAATTTTCTTC
ACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCATAAAGCGCA
GAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCGTCCATGTGA
ACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTCAAGAAATGG
GGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCCTTACGGCAG
CGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTGCAGCTCAGA
TTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACCAGTTCGACT
GTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATCACCCACCGA
TATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGGACGTAGGCG
AAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTCCCCTTGTTG
CATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTCCAGCCCGGA
TGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAACAGCCTCCGA
TACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCACAGCGCGCAT
GCCAACGAGAATCGTTAGATGCGGGGATCTGAGGCATCGGGGCCCGGTGC
TCTCTTTGATGCTCCCTCGACTCTTGCCACGTCCCTTGGAATCAATCCCA
CCGCTGCTTCTGAACCCCCTCCGACCGATCCCAAACTAGTCGCCTCGAAC
ATTGAACATGTCTTGTTGTCCATGTCAGAAGGCAATGGCGGTCTAGTTAG
CGTCAGTGGCAACTCGTCGGGTTCTACCGGCAAGGGTATCCTGATAGGCG
TCCTCTCTGCCTTTGGATCCGCCGCCGTTGCAGTGCTTGTACTCGCTGTT
TTCTTTTTCTTCAAATACACTCAGCGTGGTAGAATTATTCTCGATCGCAT
CGGCCGACCGGGTGAATTCGACGATGAGCAAGCGTTTGCGCGCGAGGAGG
CGGAAGCCTTGGAGACGATGGATGACCTCACGCGATCGGAGTATATGAGA
GCGAAGGCATTTATCGAAGCCAATCCGCCCGAGTCCGTACAAACCGACAT
ATCACTCTCTCAGTTCCTCGCGATTCAAGAAAAAGGAGTATCGGCTTGGG
AGTTTCAACCAGAGTTGGAAATCGCCAATTGCTTTGTCGAAGGCCGTACG
GAAATCGAGTTCTACGACTCGGAATGCAGTGTCCAGACCAATTTGCCCGT
TCCGAAACAGAATGACGTCTATTACTGGGAGGCTAAGATCTACGACAAAC
CTGATAATACTCTTATCAGTATTGGGATGACTACGAAACCGTATCCTTTG
TTCAAATTACCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGG
TCATAGGAGGCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACC
TTTTGCAAGGTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACA
ATTTTCTTCACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCA
TAAAGCGCAGAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCG
TCCATGTGAACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTC
AAGAAATGGGGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCC
TTACGGCAGCGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTG
CAGCTCAGATTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACC
AGTTCGACTGTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATC
ACCCACCGATATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGG
ACGTAGGCGAAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTC
CCCTTGTTGCATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTC
CAGCCCGGATGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAAC
AGCCTCCGATACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCAC
AGCGCGCATGCCAACGAGAATCGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSH4ATCC64974_13010Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13010-T1.exon1ATCC64974_13010-T1.exon1Aspergillus niger N402exon
ATCC64974_13010-T1.exon2ATCC64974_13010-T1.exon2Aspergillus niger N402exon
ATCC64974_13010-T1.exon3ATCC64974_13010-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13010-T1.cdsATCC64974_13010-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13010-T1ATCC64974_13010-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR035780
DBxrefInterPro:IPR001870
DBxrefInterPro:IPR003877
DBxrefPFAM:PF00622
Product sorting of cargo proteins at the multivesicular body
ProductRsp5p-dependent ubiquitination
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:533914..535597 +
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