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ATCC64974_13120-T1, ATCC64974_13120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_13120-T1
Unique NameATCC64974_13120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:584306..585212-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_13120-T1 ID=ATCC64974_13120-T1|Name=ATCC64974_13120-T1|organism=Aspergillus niger N402|type=mRNA|length=907bp|location=Sequence derived from alignment at OGUI01000003.1:584306..585212- (Aspergillus niger N402)
ATGACGCTTTACTACAGCCTCGTACGTACCGCCATTTGTTGTTGACTCTC
CTCGCAATGGCATGGAGTTCGGGATTGTTGCAGCCTGCCGCCTGCAGCCC
CTGACCCGCGCACTCCCGGATCATCAGATAATATGTCGCATCAGCATGTG
CTTACAATATGGTAATAGGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGT
CTTCATGGGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAGCTCT
TCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGATTA
AAGGTATGCTATTAAACATTGTCTAACATTTGCAATCACTCATCAAGCTA
TAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCG
CGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCA
CCATGGGGTATGCTTCCGACGATCCAGGCCCTTTTTAGCATTGCACTGAA
ACAGTTACTGACCTAGCTTTCGCCACAGAGCCGCCGCTCTCGGTACCGAT
CGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCT
CTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCA
TGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGT
GACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGA
AATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTG
ACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCAC
AAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGA
CCAGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:584306..585212-

>ATCC64974_13120-T1 ID=ATCC64974_13120-T1|Name=ATCC64974_13120-T1|organism=Aspergillus niger N402|type=CDS|length=2556bp|location=Sequence derived from alignment at OGUI01000003.1:584306..585212- (Aspergillus niger N402)
AGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCT
ACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTT
ATCCTCAATCGCACTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGA
CAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCG
CTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAG
GAGCTTGCAGCCAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGA
GGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGA
AGGATGAGGCTCCCAAGAAGGACCAGTAGATCACATTCATCTTTATCCTC
ATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCT
GGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGGTTTTCTGCCTCTTGGT
GTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCTCTTCCATTCACCG
TGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAA
TTACAATATGGATTAAAGATGACGCTTTACTACAGCCTCAGCCGCCGCTC
TCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGC
AACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCG
CACTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGAC
TCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCG
CAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGC
CAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCC
GCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCT
CCCAAGAAGGACCAGTAGATCACATTCATCTTTATCCTCATCCTCTTCAT
CGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCG
GCAAAGAGGGAGGCACCATGGGGTTTTCTGCCTCTTGGTGTTTGAGATGG
CGGTCTTCATGGGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAG
CTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGG
ATTAAAGATGACGCTTTACTACAGCCTCAGCCGCCGCTCTCGGTACCGAT
CGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCT
CTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCA
TGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGT
GACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGA
AATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTG
ACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCAC
AAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGA
CCAGTAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCA
ACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGA
GGCACCATGGGGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATG
GGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTT
CATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGATTAAAGATGA
CGCTTTACTACAGCCTCAGCCGCCGCTCTCGGTACCGATCGCATGGAAGT
CCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCA
CCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCATGATCCTTGAC
GTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGC
TGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAA
TCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTGACATTGAGACC
CTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGA
TCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAGATCA
CATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATAC
CGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGG
GTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCAT
CCCTCTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAA
GTCCGATAGTAGCTAAATTACAATATGGATTAAAGATGACGCTTTACTAC
AGCCTC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_13120ATCC64974_13120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13120-T1ATCC64974_13120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13120-T1.cdsATCC64974_13120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13120-T1.exon4ATCC64974_13120-T1.exon4Aspergillus niger N402exon
ATCC64974_13120-T1.exon3ATCC64974_13120-T1.exon3Aspergillus niger N402exon
ATCC64974_13120-T1.exon2ATCC64974_13120-T1.exon2Aspergillus niger N402exon
ATCC64974_13120-T1.exon1ATCC64974_13120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264XKX
DBxrefInterPro:IPR041672
DBxrefInterPro:IPR040463
DBxrefPFAM:PF18035
DBxrefPFAM:PF05529
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:584306..585212 -
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