|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:592450..594615+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_13140-T1 ID=ATCC64974_13140-T1|Name=ATCC64974_13140-T1|organism=Aspergillus niger N402|type=mRNA|length=2166bp|location=Sequence derived from alignment at OGUI01000003.1:592450..594615+ (Aspergillus niger N402)
ATGCTCGGGTCGTCAGAAGCGACGCATAGTCCTCCTCCTCCCTCTCTTCA
TTACTCTCCCTCTATCGGGGACCTCGATTGCGCCTCTACTAGGGACTCGA
CCCCCGTCACCACTCCCCTCGGGTTTGGCGTACCGTTGCGCAGACCGGAT
AGGGAAAAGCTCTCGGATTCCTCGTTCACTCGAAATTCACTCGACATCGG
CGGCGACACGTCCTCACCGTACTTTTACAGCCAGCAACTACACTCTCACT
CTGATTCAGATCTCGACTTCCCTCTCTTTCCTTCCTCCCCCATACAAACC
AACACCATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCGCCAGAG
TTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTGCTCTGC
AGAGAGCTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCAAATGGT
GTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGG
TGCAGCTACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAATGTCCG
GCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTT
GGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGA
GTGAGTGTCCTTTGTCCTTATGGGAATCATTTCGGTTTCCCCTGATCGCG
CAAGTGCTTTGGCCACTGGAAGCTGACGATGAATCATCTAGCATAATCAT
GACCGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCATCCT
CATATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGTTGT
GGGGTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGAAGC
TCACGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGACA
GTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTCAG
CAAAACAATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGACTT
GCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATATGG
ATACCATTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGATGCC
GCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGAGG
TTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGCTTC
CAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTTCT
GGGCGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAATAC
TCCTACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCACAC
CAGACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATGCTT
GGTGGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCAGTC
TCAGTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGTGTA
TCGACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAACACT
CCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGTGA
GATCGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGATA
CCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAGTC
ATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCACAA
AGCTGTAAGTCTTTCGAACCAAACCACTTAGCTTTTCTAACTGTTTCCTA
GCACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTT
CCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATG
GAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAA
CCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTG
ACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATG
CAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGA
AGAGGGTCTTTTATAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:592450..594615+ >ATCC64974_13140-T1 ID=ATCC64974_13140-T1|Name=ATCC64974_13140-T1|organism=Aspergillus niger N402|type=CDS|length=6084bp|location=Sequence derived from alignment at OGUI01000003.1:592450..594615+ (Aspergillus niger N402)
ATGCTCGGGTCGTCAGAAGCGACGCATAGTCCTCCTCCTCCCTCTCTTCA
TTACTCTCCCTCTATCGGGGACCTCGATTGCGCCTCTACTAGGGACTCGA
CCCCCGTCACCACTCCCCTCGGGTTTGGCGTACCGTTGCGCAGACCGGAT
AGGGAAAAGCTCTCGGATTCCTCGTTCACTCGAAATTCACTCGACATCGG
CGGCGACACGTCCTCACCGTACTTTTACAGCCAGCAACTACACTCTCACT
CTGATTCAGATCTCGACTTCCCTCTCTTTCCTTCCTCCCCCATACAAACC
AACACCATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCGCCAGAG
TTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTGCTCTGC
AGAGAGCTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCAAATGGT
GTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGG
TGCAGCTACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAATGTCCG
GCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTT
GGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGA
CATAATCATGACCGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTC
ATTCATCCTCATATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTC
AATTGTTGTGGGGTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTA
TGAAGAAGCTCACGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTC
AAGGCGACAGTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAA
CAGGGTCAGCAAAACAATAATCAAGGCCGTGGATTGCAACCAGATAGGAC
TCTGGACTTGCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATT
CGGATATGGATACCATTGATGACATGGAACTCGATGAGCCGATGGGTGAC
CACGATGCCGCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGG
CCAAGGAGGTTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTAT
CTATGCTTCCAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCC
GTTGCTTCTGGGCGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTC
CGTCAATACTCCTACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCC
GGACCACACCAGACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGAC
AGCATGCTTGGTGGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCA
GGGCCAGTCTCAGTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAG
ACTTGTGTATCGACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGA
ATTAACACTCCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCC
CAACAGTGAGATCGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTG
TTCCTGATACCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGG
TGCCCAGTCATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAA
ATACCACAAAGCTCACGGCCACAATAACCAGCAGCTTCATGACAACGCAG
ACGGCACCTTTTCCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGA
ACACTTGGTATGGAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAA
GCGTTATAAGAACCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGC
CATGCAATCCTGACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGT
GGAGGCGTCATGCAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACC
TGGCATCGGTGAAGAGGGTCTTTTATAAATGCTCGGGTCGTCAGAAGCGA
CGCATAGTCCTCCTCCTCCCTCTCTTCATTACTCTCCCTCTATCGGGGAC
CTCGATTGCGCCTCTACTAGGGACTCGACCCCCGTCACCACTCCCCTCGG
GTTTGGCGTACCGTTGCGCAGACCGGATAGGGAAAAGCTCTCGGATTCCT
CGTTCACTCGAAATTCACTCGACATCGGCGGCGACACGTCCTCACCGTAC
TTTTACAGCCAGCAACTACACTCTCACTCTGATTCAGATCTCGACTTCCC
TCTCTTTCCTTCCTCCCCCATACAAACCAACACCATGACCGGTGCAGCCG
CTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCCTCCCGGACAG
CAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTAATGGAGAACG
GACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGCGTCTTCAAGG
CCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGCACAATGGGGC
AACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCGATAAAGGCCG
CCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGCTGGGGTGGTG
TGTCTGTTGGCAGTTGGATTCGCGATGACATAATCATGACCGGCACATCT
CCGTTCACTTTCCAGTCACCGTCATTTCATTCATCCTCATATTTACCCAA
GCTGGAGGCAAACTTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTC
CGACGCTTCACGATCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAG
TCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCT
GGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATC
AAGGCCGTGGATTGCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTG
AGTCAGGTCCCTCACACTCAGCAGCATTCGGATATGGATACCATTGATGA
CATGGAACTCGATGAGCCGATGGGTGACCACGATGCCGCCACTGCACAGC
TGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCC
AACCAAAGGGTTCCGCATCTGAATCTATCTATGCTTCCAGGACACCAAGG
GTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTAT
CGCTGCAGAACAACCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATG
GCGAACCCTCTACAGAACTCACAGTTCCGGACCACACCAGACTCGTCTGC
ACCTGGGACGCCGGCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAG
ATCTGGCTATGCAAAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGG
TTCGCTGGGAACAACAACGATATGGTAGACTTGTGTATCGACGAACCAGC
CAAACGGTTGTTTAGCCCCACCGGCGGAATTAACACTCCCAACGCTCACT
TCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGC
ATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCT
TCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGA
AGGCGTATAAGAACCAGAATGGTCTGAAATACCACAAAGCTCACGGCCAC
AATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTTCCATCGTCAA
TCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATGGAGAAGGAGA
AGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAACCTGAATGGT
CTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTGACTTCCAGCT
TGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATGCAAGGGCAGA
ACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGAAGAGGGTCTT
TTATAAATGCTCGGGTCGTCAGAAGCGACGCATAGTCCTCCTCCTCCCTC
TCTTCATTACTCTCCCTCTATCGGGGACCTCGATTGCGCCTCTACTAGGG
ACTCGACCCCCGTCACCACTCCCCTCGGGTTTGGCGTACCGTTGCGCAGA
CCGGATAGGGAAAAGCTCTCGGATTCCTCGTTCACTCGAAATTCACTCGA
CATCGGCGGCGACACGTCCTCACCGTACTTTTACAGCCAGCAACTACACT
CTCACTCTGATTCAGATCTCGACTTCCCTCTCTTTCCTTCCTCCCCCATA
CAAACCAACACCATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCG
CCAGAGTTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTG
CTCTGCAGAGAGCTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCA
AATGGTGTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTC
TATCGGTGCAGCTACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAA
TGTCCGGCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGT
TTAGTTGGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCG
CGATGACATAATCATGACCGGCACATCTCCGTTCACTTTCCAGTCACCGT
CATTTCATTCATCCTCATATTTACCCAAGCTGGAGGCAAACTTCATGCGC
GACTTCAATTGTTGTGGGGTGACCCTTCCGACGCTTCACGATCTTTTGCA
GCACTATGAAGAAGCTCACGCCACCAAGTCACCTCAGCAGGGCCACCGCC
CCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAG
CAGCAACAGGGTCAGCAAAACAATAATCAAGGCCGTGGATTGCAACCAGA
TAGGACTCTGGACTTGCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGC
AGCATTCGGATATGGATACCATTGATGACATGGAACTCGATGAGCCGATG
GGTGACCACGATGCCGCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGA
TGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGA
ATCTATCTATGCTTCCAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGT
ACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGCAGAACAACCCAACAGT
TTCTTCCGTCAATACTCCTACTTTGATGGCGAACCCTCTACAGAACTCAC
AGTTCCGGACCACACCAGACTCGTCTGCACCTGGGACGCCGGCAGAACTC
GATGACAGCATGCTTGGTGGCTTCGGAGATCTGGCTATGCAAAACCCAAT
GATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCTGGGAACAACAACGATA
TGGTAGACTTGTGTATCGACGAACCAGCCAAACGGTTGTTTAGCCCCACC
GGCGGAATTAACACTCCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTA
TGGTCCCAACAGTGAGATCGCTCGACGCATCCGAGAGCAACAGTTGTTGG
CAGGTGTTCCTGATACCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCT
TTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGG
TCTGAAATACCACAAAGCTCACGGCCACAATAACCAGCAGCTTCATGACA
ACGCAGACGGCACCTTTTCCATCGTCAATCCCGAGACCTCAACTCCATAT
CCTGGAACACTTGGTATGGAGAAGGAGAAGCCCTACCGCTGCGAGGTCTG
TGGCAAGCGTTATAAGAACCTGAATGGTCTTAAATATCACAAGTCGCACT
CGCCGCCATGCAATCCTGACTTCCAGCTTGCTGCAGGCAGGAACTTGGCT
TTTGGTGGAGGCGTCATGCAAGGGCAGAACATCAACGTTGCTGGGGCTGG
CCTACCTGGCATCGGTGAAGAGGGTCTTTTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_13140-T1 | ATCC64974_13140-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:592450..594615 + |
|
