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ATCC64974_13290-T1, ATCC64974_13290-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_13290-T1
Unique NameATCC64974_13290-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:642887..643857+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_13290-T1 ID=ATCC64974_13290-T1|Name=ATCC64974_13290-T1|organism=Aspergillus niger N402|type=mRNA|length=971bp|location=Sequence derived from alignment at OGUI01000003.1:642887..643857+ (Aspergillus niger N402)
ATGTCCTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGG
TCAGCTCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGTAC
ATACATACCTTCACTTTCTTGCCATAGCCCCCCATTGCCGAAGTATTCTG
CAGTACTAATAGAAATGAAATCTTAGGATTACTCCCTCCGCGCGAAAGAC
TACAACACGAAGAAAGAGAAAATTAAGCGCCTCCAAGAAAAAGTCCGCGA
CCGCAACCCCGATGAATTCGCCTTCGGAATGATGTCGAGTTCGTCCGCTC
GACAAGGCAAACACGGCGCTGCGGGAAACCGCGACTCGGCTGCCGCGCGC
GGTCTCAGCCACGATGCCATTAAGTTGCTCAAGACACAGGATGCGGGGTA
CCTGCGGACAGTTGGGGAGCGGATCCGACGACAGATGGAGAAGTTGGAGG
AGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATCCTGGATGGGGATGCT
GGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGATGACGATGATATGGA
CTTTGATTTCGATTTCGGGGATGATGAGGTGGATCAGAAGAAGAATAAGA
AGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAGGAGCAGAGGGTGTTG
AGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGATGATGATGAGGAAGA
GGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGTCGAGGAAGCAGTTGG
AGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGGGCTCGCAAAATGAAG
AAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAAGGCGCTGCAGAAGCA
GTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGGATTGGCAGCGTGGTC
GGATGGATAATGTGGTGGGTGGCACGAATAAGAATGGTGTCAAGTGGAAG
ATCCGTGAGCGGAAGAAGTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:642887..643857+

>ATCC64974_13290-T1 ID=ATCC64974_13290-T1|Name=ATCC64974_13290-T1|organism=Aspergillus niger N402|type=CDS|length=1782bp|location=Sequence derived from alignment at OGUI01000003.1:642887..643857+ (Aspergillus niger N402)
ATGTCCTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGG
TCAGCTCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGATT
ACTCCCTCCGCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGC
CTCCAAGAAAAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAAT
GATGTCGAGTTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACC
GCGACTCGGCTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTC
AAGACACAGGATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACG
ACAGATGGAGAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGG
AGATCCTGGATGGGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGACGTG
ATGGATGACGATGATATGGACTTTGATTTCGATTTCGGGGATGATGAGGT
GGATCAGAAGAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATC
GGAAGGAGCAGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAA
GATGATGATGATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAA
AAAGTCGAGGAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTC
GTCGGGCTCGCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAG
CTCAAGGCGCTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGA
GCTGGATTGGCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATA
AGAATGGTGTCAAGTGGAAGATCCGTGAGCGGAAGAAGTGAATGTCCTCC
ATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGGTCAGCTCGA
AGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGATTACTCCCTCC
GCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGCCTCCAAGAA
AAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAATGATGTCGAG
TTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACCGCGACTCGG
CTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTCAAGACACAG
GATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACGACAGATGGA
GAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATCCTGG
ATGGGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGATGAC
GATGATATGGACTTTGATTTCGATTTCGGGGATGATGAGGTGGATCAGAA
GAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAGGAGC
AGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGATGAT
GATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGTCGAG
GAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGGGCTC
GCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAAGGCG
CTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGGATTG
GCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATAAGAATGGTG
TCAAGTGGAAGATCCGTGAGCGGAAGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_13290ATCC64974_13290Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13290-T1.exon1ATCC64974_13290-T1.exon1Aspergillus niger N402exon
ATCC64974_13290-T1.exon2ATCC64974_13290-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13290-T1.cdsATCC64974_13290-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13290-T1ATCC64974_13290-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264CA0
DBxrefInterPro:IPR007144
DBxrefPFAM:PF03998
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:642887..643857 +
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