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ATCC64974_14230-T1, ATCC64974_14230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_14230-T1
Unique NameATCC64974_14230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:924774..925994-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_14230-T1 ID=ATCC64974_14230-T1|Name=ATCC64974_14230-T1|organism=Aspergillus niger N402|type=mRNA|length=1221bp|location=Sequence derived from alignment at OGUI01000003.1:924774..925994- (Aspergillus niger N402)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTCGA
CCTGTCCGATGCTGCTGATGGCTCCACCGTATGTGCTCTCAGCCGTCTTC
CATCCTGGCTATCACGCTAACACCATCTAGATCACCTTCGAGGGCACCAC
TTCCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGGTGGTA
AGGATCTGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGT
TCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAA
GTTCATGTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCATCAACA
TCAAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCAC
CTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCA
CAACACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACATCAGCG
GTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAG
GCACGATATCCCTATTCCACTATCATTCCTTCCATTCATATCGCTAACAA
TCAAACCCACAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCA
CGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGA
ACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGC
ATCAAGACCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTC
TAACATCCAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGG
ACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATC
ACTGATGTCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCAC
CCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGT
CCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTT
CCTTCCGGTGCTTCTTGCTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:924774..925994-

>ATCC64974_14230-T1 ID=ATCC64974_14230-T1|Name=ATCC64974_14230-T1|organism=Aspergillus niger N402|type=CDS|length=3195bp|location=Sequence derived from alignment at OGUI01000003.1:924774..925994- (Aspergillus niger N402)
AGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTCTCCAT
CGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGACCATCT
CCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGCATCAAGACCATC
TACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTCTAACATCCAGCT
CTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGGACTACGAGAACG
GCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATGTCACC
GTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCACCCAGGTCTACAT
TCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGTTGACC
TCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCGGTGCT
TCTTGCTAAATCACCTTCGAGGGCACCACTTCCTTCGGATACAAGGAATG
GAAGGGCCCCCTGATCCGCTTCGGTGGTAAGGATCTGACTGTCACCATGG
CCGACGGCGCTGTCATCGACGGTGACGGTTCCCGCTGGTGGGACAGCAAG
GGTACCAACGGTGGCAAGACCAAGCCCAAGTTCATGTACATCCACGATGT
TGAGGACTCGACCTTCAAGGGCATCAACATCAAGAACACTCCCGTCCAGG
CCATCAGTGTCCAGGCTACCAACGTCCACCTGAACGACTTCACCATCGAC
AACTCCGACGGTGATGACAACGGTGGCCACAACACCGACGGTTTCGACAT
CAGCGAGTCTACCGGTGTCTACATCAGCGGTGCTACCATGCACTCTTACC
AGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTCTGCCGCCCCCGCT
CCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTACCTGCACCTTCAC
CTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGCTCCGATGTTGTCC
TGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTCGACCTGTCCGATGCT
GCTGATGGCTCCACCAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGG
CCACGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCA
AGAACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTC
CGCATCAAGACCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTA
CTCTAACATCCAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGC
AGGACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCC
ATCACTGATGTCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGC
CACCCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCT
GGTCCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAAC
GTTCCTTCCGGTGCTTCTTGCTAAATCACCTTCGAGGGCACCACTTCCTT
CGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGGTGGTAAGGATC
TGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTCCCGC
TGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGTTCAT
GTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCATCAACATCAAGA
ACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCTGAAC
GACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACAACAC
CGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACATCAGCGGTGCTA
CCATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTC
TCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTC
TACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCT
GCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTC
GACCTGTCCGATGCTGCTGATGGCTCCACCAGCATCTCTTTCACCGGCGG
TACCTGCTCCGGTGGCCACGGTCTCTCCATCGGCTCTGTCGGTGGCCGTG
ATGACAACACCGTCAAGAACGTGACCATCTCCGACTCCACTGTCAGCAAC
TCCGCCAACGGTGTCCGCATCAAGACCATCTACAAGGAGACCGGTGATGT
CAGCGAGATCACCTACTCTAACATCCAGCTCTCCGGAATCACCGACTACG
GTATCGTCATCGAGCAGGACTACGAGAACGGCTCTCCCACCGGCACCCCC
TCCACCGGTATCCCCATCACTGATGTCACCGTTGACGGTGTCACCGGTAC
TCTCGAGGATGACGCCACCCAGGTCTACATTCTCTGCGGTGACGGCTCTT
GCTCTGACTGGACCTGGTCCGGTGTTGACCTCTCTGGTGGCAAGACCAGC
GATAAATGCGAGAACGTTCCTTCCGGTGCTTCTTGCTAAATCACCTTCGA
GGGCACCACTTCCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCT
TCGGTGGTAAGGATCTGACTGTCACCATGGCCGACGGCGCTGTCATCGAC
GGTGACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGAC
CAAGCCCAAGTTCATGTACATCCACGATGTTGAGGACTCGACCTTCAAGG
GCATCAACATCAAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACC
AACGTCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAA
CGGTGGCCACAACACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCT
ACATCAGCGGTGCTACCATGCACTCTTACCAGCTTCTTGGCCTGGCCGCT
GTCGGCTCCCTCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTT
CGCTAAGAAGGCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCG
AGAGCATCTCCAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCC
GCTGGCGAGACCCTCGACCTGTCCGATGCTGCTGATGGCTCCACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_14230ATCC64974_14230Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_14230-T1ATCC64974_14230-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_14230-T1.cdsATCC64974_14230-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_14230-T1.exon3ATCC64974_14230-T1.exon3Aspergillus niger N402exon
ATCC64974_14230-T1.exon2ATCC64974_14230-T1.exon2Aspergillus niger N402exon
ATCC64974_14230-T1.exon1ATCC64974_14230-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:924774..925994 -
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