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ATCC64974_1450-T1, ATCC64974_1450-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_1450-T1
Unique NameATCC64974_1450-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:465149..466359-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_1450-T1 ID=ATCC64974_1450-T1|Name=ATCC64974_1450-T1|organism=Aspergillus niger N402|type=mRNA|length=1211bp|location=Sequence derived from alignment at OGUI01000001.1:465149..466359- (Aspergillus niger N402)
ATGCCTCCTCCACAGATCAAGCAGGATCTGAACCGGTCCGGATGGGAGAC
CACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGACAATCCTTACG
TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTGTAGGCAAC
CCTATCCTCAATCACACAAACATATGACACTAACAGATACCCAGTGCACG
CGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAA
GCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAAT
GCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCT
GCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATA
CTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGG
AGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTC
GCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACC
CCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTAC
ACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGG
AGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGGTGGTCG
TGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAG
ATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTTACTGGT
GTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTT
TGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCG
TCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAG
GGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCC
CAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATGCGCGGG
AAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAGAAGGCC
ATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTA
TGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGT
CTGGTGATTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:465149..466359-

>ATCC64974_1450-T1 ID=ATCC64974_1450-T1|Name=ATCC64974_1450-T1|organism=Aspergillus niger N402|type=CDS|length=2316bp|location=Sequence derived from alignment at OGUI01000001.1:465149..466359- (Aspergillus niger N402)
TGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCG
CCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCT
GTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGT
GATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCG
CGAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCG
CGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGG
AGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGC
CGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGG
TTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAA
AGCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGG
TGGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGG
CAGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTT
ACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCAC
ACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTG
CATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAG
TGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGG
TAAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATG
CGCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAG
AAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACG
GAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCA
GTTTGTCTGGTGATTGAATGCCTCCTCCACAGATCAAGCAGGATCTGAAC
CGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAGAACTGCCT
GCCCGACAATCCTTACGTTCAGATGCTCAAGGAAGACCATGGCGCAGAAT
GCAAGATTTGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGC
ACCGCGCGCCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAA
GAACTGCTGTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCG
TCGTTCGTGATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACC
ATCAACCGCGAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGG
GCGTGGCGCGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGC
TGCTTCGGAGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAG
ATAGAGGCCGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGA
CGCACCGGTTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGA
CGAGCGAAAGCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGT
ATGCGTGGTGGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCC
CCCATCGGCAGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGC
TCTTTGTTACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACT
TTCTTCACACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGC
TCACTCTGCATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTG
CCAAGCAGTGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTT
CGCTGGGGTAAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTT
GAAGAATGCGCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATT
CTGGAAAGAAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAA
AAACAACGGAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCA
GTACTCCAGTTTGTCTGGTGATTGAATGCCTCCTCCACAGATCAAGCAGG
ATCTGAACCGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAG
AACTGCCTGCCCGACAATCCTTACGTTCAGATGCTCAAGGAAGACCATGG
CGCAGAATGCAAGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLT11ATCC64974_1450Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1450-T1ATCC64974_1450-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1450-T1.cdsATCC64974_1450-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1450-T1.exon2ATCC64974_1450-T1.exon2Aspergillus niger N402exon
ATCC64974_1450-T1.exon1ATCC64974_1450-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263BDA
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034356
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor slt11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:465149..466359 -
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