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ATCC64974_15390-T1, ATCC64974_15390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15390-T1
Unique NameATCC64974_15390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1271857..1274442-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15390-T1 ID=ATCC64974_15390-T1|Name=ATCC64974_15390-T1|organism=Aspergillus niger N402|type=mRNA|length=2586bp|location=Sequence derived from alignment at OGUI01000003.1:1271857..1274442- (Aspergillus niger N402)
ATGGCCGGTGATCGCTCTTCATCTCACGATCCTGCCCGCATAAGCTCAGG
AACTCCGTCGAGCGCCAAGAAGTCCCAAAAAAGAAAGAGAGATCTTGATG
GCTCCGCCACCGCTATATCCACACCGACCCCGACGAAGAAATCCAAGAAG
AATCAGGGTTCTCCATCCAACGATACCCCAGTCAAAGAAAGCCGGAAGAA
GAAAAAGCACTCGGGAGCTGCAAGCCGCAGTGCTGTTCAAGAGACTTCGC
CCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGCGGCCAAACGACTACTGCA
AACCAAGACGACAGCCTCACTAAGAAAAAGAAGAAGTCGAAGGATGGAAA
GCGGAAAAGCGGAACAATTAGCGATGCAGTTGAGGGAGATGTCGATATGA
AGGATGCGGACGACTCTGAAGAAGTTAAAGAGGAACAAGCCAAAGGGACA
AAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGCGACAGAGAATGACGACGA
CAAACCTACGAAGAACAAATTTGCCGGCATCCTGTCCAAGTTTGAGAGGT
CGAAAAAAGCACGGGAGCTGGAAAAGACAAGAGAAAGCACGAAGGATGAA
GATTCCACTGAGCCAACGACAGCAGAGCCAGTTATAGCACAAGGTCTGGA
GCCGTTACCACAACCAGAGGCAGCGCCTGAGCAGGATGAGATGCCAACTT
ACTCCTCGCTGCCGCCGTGGCTGGCCAATCCCCTCCGTGCATCGGCTCAG
GAACGACGCAAATTCGCCGATTTAGGAATCGACTCTAGCCTCCTCCGAGT
TCTGGAAGACAACGGCTATCGTGAAGCATTTGCCGTGCAGTCAACCGTCA
TTCCTCTCCTCCTGCAAGGACCTACGAACCACCCAGGAGACCTTTGCATC
TCCGCCGCTACTGGTTCAGGAAAAACTTTGTCCTACGTTCTACCATTGGT
CACGGCCTTGAAGCCGCTCCCTGCGCCTCGGTTACGAGGACTCATCGTGG
TACCTACTCGAGAGCTGGTGAAGCAGGCCAGAGAAGCTTGTGAACTCTGT
GCCGCTGGATCCGGCCTCCGCGTCGCGTCGGCAGTTGGAAACGTTGCGAT
CAAAGACGAGCAGCGGTCGTTGATGCGCGTTGATCAGGTCTATGGCCCTG
CGACATTCAAGCTTCGCCAGAACGTGCAACTGACAGGTGATGATTGGACG
AACTTCAATTTGCAGGACTACATCTCAGACGCTGGTGATCTAAGCGAGTC
TCTGCCAGGCTACGTTCACCGGTCAGAGCCTAATGTCGACATCTTAATCT
GTACTCCCGGTCGTCTGGTCGATCATCTTCGCTATACCAAAGGTTTCACT
CTTAAGAATCTCGAATGGCTTGTCATTGACGAGGCAGATCGACTACTAAA
TGAAAGTTTCCAGGAATGGGTGGACGTCGTGATGACCTCCCTGGACGCCC
GGAAAGCCCCTGATGCATTCGGGTTTAGTGGAAACTTTCTGTCCGGGCTT
GGCTTGCCGATCCAAAGCAAGGAACCAAGGAAAGTCGTTTTGAGTGCCAC
TATGACTAGAGATGTGACGAAGCTTAACTCTCTGCGTCTTGCGAACCCCA
AGCTAGTCGTCATCGGCTCCGATGCCGCTGCAACAGAAGATGAGAGCGGT
GGCGTTGCACCGTCAGACGAACAGTTTACGCTCCCGCCTACCCTAGAGGA
GCACACCGTATCGGTTGGAGATGGGTCGCAGAAGCCGCTTTATCTCCTGC
GCCTTCTGCTGTCCCACATCAAGCTTGAGACTAAGAGTATCAAGCCTTCT
GTGCACGACGCTTCTGAATCTGATGATTCTGATTCCGACGAATCAAGCTC
TGAATCGGATTCCGATGACGCGTCGGACGTGTCTAGCTCTGAAGATTCCG
ATTCCGACTCAGACTCGGATTCTGACTCTGATACAAGTTCTGACTCGTCC
ACAGACTCTGAGGATACCTCGGAGGACGAGTCGAGCGATGATTCAGAGTC
GTCGGACAGCGATTCTGAATCAGAGGACGAAAAGTCGGACCGACAAGGGC
CTTCGCAGACCACAGTTCTGGTCTTCACGAAGTCATCTGAATCCGCATCA
CGACTGGCTCGCCTGTTGGCACTCCTCGAACCCTCCCTCTCTGACCGCAT
TGGCACGATCATTAAATCCAACAAATCGTCCGCTTCGCGCAAGACCCTCA
CAGCTTACCGCCGGGGCAAGATCTCCGTGATTATTGCAACGGACCGGGCC
TCGCGTGGTCTAGACCTACGGTCACTGACCCATGTTGTCAACTACGATGT
GCCAGCTAGCATTACTACCTACGTGCACCGAGTTGGTCGTACAGCTCGAG
CTGGTCAGAAAGGATCGGCATGGACGCTTGTGGCACACCGAGAGGGCAAG
TGGTTCGCAAGCCAGATCGCCAAGGGCTCGGATGGAAAGATCACTCGGTC
CACCAAGGTTGGAAAGGTGCAATTCAAATTGGACAATATGAAGGAGGTCA
AGGCACGCTATGCATCTGCATTGGACCTGCTGGAGAAGGAAGTGAAGACG
GGTGGGACTAAGGCCTCCAAGCCCAGCGCACAATGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1271857..1274442-

>ATCC64974_15390-T1 ID=ATCC64974_15390-T1|Name=ATCC64974_15390-T1|organism=Aspergillus niger N402|type=CDS|length=2586bp|location=Sequence derived from alignment at OGUI01000003.1:1271857..1274442- (Aspergillus niger N402)
ATGGCCGGTGATCGCTCTTCATCTCACGATCCTGCCCGCATAAGCTCAGG
AACTCCGTCGAGCGCCAAGAAGTCCCAAAAAAGAAAGAGAGATCTTGATG
GCTCCGCCACCGCTATATCCACACCGACCCCGACGAAGAAATCCAAGAAG
AATCAGGGTTCTCCATCCAACGATACCCCAGTCAAAGAAAGCCGGAAGAA
GAAAAAGCACTCGGGAGCTGCAAGCCGCAGTGCTGTTCAAGAGACTTCGC
CCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGCGGCCAAACGACTACTGCA
AACCAAGACGACAGCCTCACTAAGAAAAAGAAGAAGTCGAAGGATGGAAA
GCGGAAAAGCGGAACAATTAGCGATGCAGTTGAGGGAGATGTCGATATGA
AGGATGCGGACGACTCTGAAGAAGTTAAAGAGGAACAAGCCAAAGGGACA
AAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGCGACAGAGAATGACGACGA
CAAACCTACGAAGAACAAATTTGCCGGCATCCTGTCCAAGTTTGAGAGGT
CGAAAAAAGCACGGGAGCTGGAAAAGACAAGAGAAAGCACGAAGGATGAA
GATTCCACTGAGCCAACGACAGCAGAGCCAGTTATAGCACAAGGTCTGGA
GCCGTTACCACAACCAGAGGCAGCGCCTGAGCAGGATGAGATGCCAACTT
ACTCCTCGCTGCCGCCGTGGCTGGCCAATCCCCTCCGTGCATCGGCTCAG
GAACGACGCAAATTCGCCGATTTAGGAATCGACTCTAGCCTCCTCCGAGT
TCTGGAAGACAACGGCTATCGTGAAGCATTTGCCGTGCAGTCAACCGTCA
TTCCTCTCCTCCTGCAAGGACCTACGAACCACCCAGGAGACCTTTGCATC
TCCGCCGCTACTGGTTCAGGAAAAACTTTGTCCTACGTTCTACCATTGGT
CACGGCCTTGAAGCCGCTCCCTGCGCCTCGGTTACGAGGACTCATCGTGG
TACCTACTCGAGAGCTGGTGAAGCAGGCCAGAGAAGCTTGTGAACTCTGT
GCCGCTGGATCCGGCCTCCGCGTCGCGTCGGCAGTTGGAAACGTTGCGAT
CAAAGACGAGCAGCGGTCGTTGATGCGCGTTGATCAGGTCTATGGCCCTG
CGACATTCAAGCTTCGCCAGAACGTGCAACTGACAGGTGATGATTGGACG
AACTTCAATTTGCAGGACTACATCTCAGACGCTGGTGATCTAAGCGAGTC
TCTGCCAGGCTACGTTCACCGGTCAGAGCCTAATGTCGACATCTTAATCT
GTACTCCCGGTCGTCTGGTCGATCATCTTCGCTATACCAAAGGTTTCACT
CTTAAGAATCTCGAATGGCTTGTCATTGACGAGGCAGATCGACTACTAAA
TGAAAGTTTCCAGGAATGGGTGGACGTCGTGATGACCTCCCTGGACGCCC
GGAAAGCCCCTGATGCATTCGGGTTTAGTGGAAACTTTCTGTCCGGGCTT
GGCTTGCCGATCCAAAGCAAGGAACCAAGGAAAGTCGTTTTGAGTGCCAC
TATGACTAGAGATGTGACGAAGCTTAACTCTCTGCGTCTTGCGAACCCCA
AGCTAGTCGTCATCGGCTCCGATGCCGCTGCAACAGAAGATGAGAGCGGT
GGCGTTGCACCGTCAGACGAACAGTTTACGCTCCCGCCTACCCTAGAGGA
GCACACCGTATCGGTTGGAGATGGGTCGCAGAAGCCGCTTTATCTCCTGC
GCCTTCTGCTGTCCCACATCAAGCTTGAGACTAAGAGTATCAAGCCTTCT
GTGCACGACGCTTCTGAATCTGATGATTCTGATTCCGACGAATCAAGCTC
TGAATCGGATTCCGATGACGCGTCGGACGTGTCTAGCTCTGAAGATTCCG
ATTCCGACTCAGACTCGGATTCTGACTCTGATACAAGTTCTGACTCGTCC
ACAGACTCTGAGGATACCTCGGAGGACGAGTCGAGCGATGATTCAGAGTC
GTCGGACAGCGATTCTGAATCAGAGGACGAAAAGTCGGACCGACAAGGGC
CTTCGCAGACCACAGTTCTGGTCTTCACGAAGTCATCTGAATCCGCATCA
CGACTGGCTCGCCTGTTGGCACTCCTCGAACCCTCCCTCTCTGACCGCAT
TGGCACGATCATTAAATCCAACAAATCGTCCGCTTCGCGCAAGACCCTCA
CAGCTTACCGCCGGGGCAAGATCTCCGTGATTATTGCAACGGACCGGGCC
TCGCGTGGTCTAGACCTACGGTCACTGACCCATGTTGTCAACTACGATGT
GCCAGCTAGCATTACTACCTACGTGCACCGAGTTGGTCGTACAGCTCGAG
CTGGTCAGAAAGGATCGGCATGGACGCTTGTGGCACACCGAGAGGGCAAG
TGGTTCGCAAGCCAGATCGCCAAGGGCTCGGATGGAAAGATCACTCGGTC
CACCAAGGTTGGAAAGGTGCAATTCAAATTGGACAATATGAAGGAGGTCA
AGGCACGCTATGCATCTGCATTGGACCTGCTGGAGAAGGAAGTGAAGACG
GGTGGGACTAAGGCCTCCAAGCCCAGCGCACAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP6ATCC64974_15390Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15390-T1.cdsATCC64974_15390-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15390-T1.exon1ATCC64974_15390-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15390-T1ATCC64974_15390-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261EM7
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1271857..1274442 -
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