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ATCC64974_15400-T1, ATCC64974_15400-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15400-T1
Unique NameATCC64974_15400-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1274870..1276448+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15400-T1 ID=ATCC64974_15400-T1|Name=ATCC64974_15400-T1|organism=Aspergillus niger N402|type=mRNA|length=1579bp|location=Sequence derived from alignment at OGUI01000003.1:1274870..1276448+ (Aspergillus niger N402)
ATGGTCAGTGACTTTTTCTTTCCCCAACCAGGTCAGTCGTTCTGTCTCAT
TCTCTTGTCTCTCCGACGACCAGCTACTGATGGTCCCAGGCGGGATTGAA
AGTCACATCTATCAGCTATCGACCGTAAGATTGCTAGACCTCTCGCTCGA
GCCAACGCTTATCGCTCTATAGAAGCTTATCGATCGCGGCCATAAAGTCA
TCATCATCACCCATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACC
AATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTC
GACCATGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGA
TTCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTT
TGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTT
CACCGACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCA
ACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTC
AGCCATACATGGTACGTCAACTACATGGATTATACTGAAAGCATACTAAC
TTTAAGGGCTAGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGT
TGATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCA
CCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATGATATTATCAC
GATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTA
TTGCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATC
ATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAG
GAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAG
AGGTCCGTGACGTGATGATCCGGGGCCACATTTATTTACATCCGAGTTTG
ACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTA
CGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACA
TGACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGA
AAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCA
TGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGG
AACGTGTATACCAAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTAC
GGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAG
CTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGG
CAGGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTG
TTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTG
GCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATA
AAGGCGACCGTCTGGGACCTGCATCTTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1274870..1276448+

>ATCC64974_15400-T1 ID=ATCC64974_15400-T1|Name=ATCC64974_15400-T1|organism=Aspergillus niger N402|type=CDS|length=4077bp|location=Sequence derived from alignment at OGUI01000003.1:1274870..1276448+ (Aspergillus niger N402)
ATGAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATGCCTA
CAAGGGACGCACTGGCGTTCGCTATCTCACCAATGGGCTCAAAGTTTACC
ATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGACGGTCTTC
TCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTCAAAT
TGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAGCTATTCTTC
ATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCATTCGCTGTTT
GGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGTTCAT
TTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCATACATGCAAAGAGA
ACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTTATTCCC
AATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCAATCGC
GCGACTTATGGAGCCCAATGATATTATCACGATCGTTGTCATATCTCGTC
TTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCTCGGATC
CTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGACCCAA
GGCCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGCAGGACAAGG
TTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTGATGATC
CGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGTACTGT
CCTTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCACACGCGTCG
GTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCGAAACCG
GAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTACG
TTCGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCAAGATGATGT
ATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATACCAAGGCATC
TCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGACAGGG
ATGGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCATTGATCGCC
TAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTTTGCCTC
TGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTTCC
CCGTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAATTAACCGAA
AGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTGGGACCT
GCATCTTGAATGAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCAC
CCATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGGGCTCA
AAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCG
ACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCA
AATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAG
CTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCAT
TCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCT
CAAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCATACAT
GCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCT
GTTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACG
GCCAATCGCGCGACTTATGGAGCCCAATGATATTATCACGATCGTTGTCA
TATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATT
CCTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATC
AGGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGC
AGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGAC
GTGATGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTT
TGGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCA
CACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTT
GCGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGC
AGCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCA
AGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATAC
CAAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCC
CGGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCA
TTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTG
TTTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGAT
GTGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAA
TTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGT
CTGGGACCTGCATCTTGAATGAAGCTTATCGATCGCGGCCATAAAGTCAT
CATCATCACCCATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACCA
ATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCG
ACCATGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGAT
TCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTT
GTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTC
ACCGACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAA
CAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTCA
GCCATACATGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTG
ATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACC
AGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATGATATTATCACGA
TCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATT
GCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCAT
TGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAGGA
ATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAG
GTCCGTGACGTGATGATCCGGGGCCACATTTATTTACATCCGAGTTTGAC
TGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACG
TGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATG
ACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAA
AGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCATG
ACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAA
CGTGTATACCAAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGG
CTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCT
TTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCA
GGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTT
CTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTGGC
CCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAA
GGCGACCGTCTGGGACCTGCATCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GPI3ATCC64974_15400Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15400-T1.exon1ATCC64974_15400-T1.exon1Aspergillus niger N402exon
ATCC64974_15400-T1.exon2ATCC64974_15400-T1.exon2Aspergillus niger N402exon
ATCC64974_15400-T1.exon3ATCC64974_15400-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15400-T1.cdsATCC64974_15400-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15400-T1ATCC64974_15400-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262TO9
NoteCAZy:GT4
DBxrefInterPro:IPR001296
DBxrefInterPro:IPR013234
DBxrefPFAM:PF08288
DBxrefPFAM:PF13579
DBxrefPFAM:PF13692
DBxrefPFAM:PF13439
DBxrefPFAM:PF00534
ProductPhosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1274870..1276448 +
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