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ATCC64974_15470-T1, ATCC64974_15470-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15470-T1
Unique NameATCC64974_15470-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1287330..1288253+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15470-T1 ID=ATCC64974_15470-T1|Name=ATCC64974_15470-T1|organism=Aspergillus niger N402|type=mRNA|length=924bp|location=Sequence derived from alignment at OGUI01000003.1:1287330..1288253+ (Aspergillus niger N402)
ATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGGTACCAATA
CCCCCTCCCATCCCATTTCCCCCTAAACACCTATACTAAAAAAATGTGAA
TAAAACAGGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGA
AGCCCTGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGACCCGACA
AGCTCGCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCT
CTCCTGACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGT
GCTGGCTGAATCGGGTATTATCATCGAGTACCTGCTCGATCACTTCGGCT
CCAATGCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGAT
GGTGTAGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGTACTTCAT
GCACTATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTA
TGGATAGTATGTTTCCCATGACCCATACCAGATCTATGTAATGTGTGTGT
GTGTGCTAATGATGATGACAGCGGTGAAAAACCCCCCTGGAATGCCCTTC
TTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGGTCGAGAAGGCGTT
CCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTGGAAGATCAGCTGC
GGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGACGGAGTTGACGGCC
GCGGACATTATGATGAGTTTCCCGGTGATTGCTATGTCCGGGAGGTTGGA
GGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTATGCGGATAGATTGG
AGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGTGGAGGAGGTGGAT
GGGAAGTTTGAGGCTTCCCTGTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1287330..1288253+

>ATCC64974_15470-T1 ID=ATCC64974_15470-T1|Name=ATCC64974_15470-T1|organism=Aspergillus niger N402|type=CDS|length=2376bp|location=Sequence derived from alignment at OGUI01000003.1:1287330..1288253+ (Aspergillus niger N402)
ATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGGCTCTCCCA
ATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTCAACT
ACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCCGGAA
CTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCCAGCC
CGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCGGGTA
TTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAAACCT
CTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCGGAGA
AACAGAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAGGGCA
GTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGATACGGTGAAAAAC
CCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGG
CCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGGAGT
TCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGC
GGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGATTGC
TATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGG
GGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTGAAG
AAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAATGACCGA
CCCCAACAAAGGCACCAAAATCACCCTCTACTGGCTCTCCCAATCCCGCT
CTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTCAACTACGAGCTA
AAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCCGGAACTGAAAGA
GATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCCAGCCCGCGAATG
CCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCGGGTATTATCATC
GAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAAACCTCTCCTCCC
GCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCGGAGAAACAGAGG
AATGGATGCGCTATCGGTACTTCATGCACTATGCTGAGGGCAGTCTCATG
CCGTTTTTGGTCATGCAGTTGGTTATGGATACGGTGAAAAACCCCCCTGG
AATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGGTCG
AGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTGGAA
GATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGACGGA
GTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGTCCG
GGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTATGCG
GATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGTGGA
GGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAATGACCGACCCCAACA
AAGGCACCAAAATCACCCTCTACTGGCTCTCCCAATCCCGCTCTCACCGC
ATCCTCTGGCTCCTCGAAGCCCTGCACCTCAACTACGAGCTAAAGATCTA
CCACCGCGGACCCGACAAGCTCGCGCCCCCGGAACTGAAAGAGATCCATC
CGTTAGGAAAGTCGCCTCTCCTGACTATCCAGCCCGCGAATGCCACTCCA
GACCAGAAGCCCATTGTGCTGGCTGAATCGGGTATTATCATCGAGTACCT
GCTCGATCACTTCGGCTCCAATGCAGAGAAACCTCTCCTCCCGCCCCGGT
GGAAAGATACCCAAGATGGTGTAGTTGGCGGAGAAACAGAGGAATGGATG
CGCTATCGGTACTTCATGCACTATGCTGAGGGCAGTCTCATGCCGTTTTT
GGTCATGCAGTTGGTTATGGATACGGTGAAAAACCCCCCTGGAATGCCCT
TCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGGTCGAGAAGGCG
TTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTGGAAGATCAGCT
GCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGACGGAGTTGACGG
CCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGTCCGGGAGGTTG
GAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTATGCGGATAGATT
GGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGTGGAGGAGGTGG
ATGGGAAGTTTGAGGCTTCCCTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_15470ATCC64974_15470Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15470-T1.exon1ATCC64974_15470-T1.exon1Aspergillus niger N402exon
ATCC64974_15470-T1.exon2ATCC64974_15470-T1.exon2Aspergillus niger N402exon
ATCC64974_15470-T1.exon3ATCC64974_15470-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15470-T1.cdsATCC64974_15470-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15470-T1ATCC64974_15470-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1287330..1288253 +
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