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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1414836..1416685+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_15880-T1 ID=ATCC64974_15880-T1|Name=ATCC64974_15880-T1|organism=Aspergillus niger N402|type=mRNA|length=1850bp|location=Sequence derived from alignment at OGUI01000003.1:1414836..1416685+ (Aspergillus niger N402)
ATGGCTTCCTTTGAAGAAGAAGACCGGAAGTATCTGGACGATGTCCAGGC
CGTCCAGAAGTGGTGGCAGGACTCCAGATGGAGACACACCAAGCGCCCCT
TTACTGCTGAGCAGATTGTGGCTAAGCGCGGCACCCTGAAGATCGAATAC
CCTTCCAATGCTATGAGCAAGAAGCTGTGGAAGATCTTGGAGAGCAATTT
CGAGGTTCGCATGTCCCTGCTCTGTGGTGGTTGACATATTTCCTAAATTT
ATCTGTCCTCCATTAGAAAAAAGTACCTAGCTTCACCTATGGCTGTCTCG
AGCCCACAATGCTCACCCAGATGGCCAAATACCTTGACACCGTCTACGTC
TCTGGCTGGCAGAGCTCCTCCACCGCCTCGTCCACCGACGAACCCTCTCC
CGACCTTGCCGACTACCCCATGGTAGGTCTCAAAAGGATGTTGTTGGTTG
TGGGATCACTGCTAAAACATGAGTTAGAATACCGTCCCCAACAAGGTCAA
CCAGCTGTTCCTGGCTCAGCTGTTCCATGACCGGAAACAGCGCGAAGAAC
GCATCACCACTCCCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGACTAC
CTCCGCCCCATCATTGCGGATGCCGATACCGGACATGGTGGCTTGACGGC
CGTGATGAAGCTGACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGTATTC
ACATTGAAGACCAGGCTCCGGGAACCAAGAAGTGCGGCCACATGGCCGGA
AAGGTGCTTGTGCCTATCAGCGAACACATCAACCGTCTGGTGGCTATCCG
TGCGCAAGCGGATATCATGGGTATGTAGCATCCTCATTCGCTTAATATGC
ATGGCATCAACTGACTCTATTCAGGCACCGATCTGCTTGCCATCGCTCGA
ACCGACTCCGAAGCCGCCACTCTCATTACCTCCACAATTGATTACCGCGA
TCATGCCTTCGTCGTGGGCTCAACAAACCCCAACCTGCAGCCCCTCAACG
ACCTCATGGTGGCCGCAGAGCAGGCTGGCAAGAACGGAAACGAGCTGCAA
GCCATCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCAGCGA
GGCTGTCATCGATACCATCAACAAGAGCTCCTCTGGTAACAAGAAGGCCC
TCATCGATGAGTACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGAAGCC
CGGGCTATTGCCAAGGACATCACTGGCGTCGACATCTACTGGGACTGGGA
CGCCCCTCGCACCCGGGAGGGCTTCTACCGGTACCAGGGAGGTACGCAGT
GTGCGGTGAACCGCGCCATTGCGTATGGCCCATTCGCAGATCTCATCTGG
ATGGAGAGCAAGCTGCCCGACTATGCCCAGGCGAAGGAGTTTGCCGACGG
TGTTCACGCCGTGTGGCCCGAGCAGAAGTAAGTGTTGTCCTGATTTGCAT
TGCATCAGCGGAGACTTCGATACTAACCTGACCCTTTAGGCTGGCGTACA
ACCTGTCGCCCTCATTCAACTGGAAGAAGGCGATGCCGCGCGATGAGCAG
GAGACCTACATCCAGCGCCTGGGAGCCCTGGGATACTGCTGGCAGTTCAT
CACCCTGGCGGGTCTGCACACGACGGCGCTGATCACGGATCAGTTTGCCA
AGGCGTACGCGAAGCAGGGCATGCGGGCGTACGGCGAGTTGGTGCAAGAA
CCCGAGATGGAGCAGGGGGTGGATGTGGTGACTCACCAGAAATGGAGTGG
TGCCAACTACGTGGATAATATGTTGAAGATGGTGACGGGCGGCATCAGCA
GTACGGCCGCCATGGGCAAGGGCGTCACGGAGGATCAGTTCAAGCACTGA
back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1414836..1416685+ >ATCC64974_15880-T1 ID=ATCC64974_15880-T1|Name=ATCC64974_15880-T1|organism=Aspergillus niger N402|type=CDS|length=8085bp|location=Sequence derived from alignment at OGUI01000003.1:1414836..1416685+ (Aspergillus niger N402)
ATGGCTTCCTTTGAAGAAGAAGACCGGAAGTATCTGGACGATGTCCAGGC
CGTCCAGAAGTGGTGGCAGGACTCCAGATGGAGACACACCAAGCGCCCCT
TTACTGCTGAGCAGATTGTGGCTAAGCGCGGCACCCTGAAGATCGAATAC
CCTTCCAATGCTATGAGCAAGAAGCTGTGGAAGATCTTGGAGAGCAATTT
CGAGAAAAAAGTACCTAGCTTCACCTATGGCTGTCTCGAGCCCACAATGC
TCACCCAGATGGCCAAATACCTTGACACCGTCTACGTCTCTGGCTGGCAG
AGCTCCTCCACCGCCTCGTCCACCGACGAACCCTCTCCCGACCTTGCCGA
CTACCCCATGAATACCGTCCCCAACAAGGTCAACCAGCTGTTCCTGGCTC
AGCTGTTCCATGACCGGAAACAGCGCGAAGAACGCATCACCACTCCCAAG
GAGCAGCGTGGCAAGGTGGCAAATGTTGACTACCTCCGCCCCATCATTGC
GGATGCCGATACCGGACATGGTGGCTTGACGGCCGTGATGAAGCTGACCA
AGCTGTTTATTGAGCGTGGTGCTGCTGGTATTCACATTGAAGACCAGGCT
CCGGGAACCAAGAAGTGCGGCCACATGGCCGGAAAGGTGCTTGTGCCTAT
CAGCGAACACATCAACCGTCTGGTGGCTATCCGTGCGCAAGCGGATATCA
TGGGCACCGATCTGCTTGCCATCGCTCGAACCGACTCCGAAGCCGCCACT
CTCATTACCTCCACAATTGATTACCGCGATCATGCCTTCGTCGTGGGCTC
AACAAACCCCAACCTGCAGCCCCTCAACGACCTCATGGTGGCCGCAGAGC
AGGCTGGCAAGAACGGAAACGAGCTGCAAGCCATCGAAGACCAGTGGGTT
GCTCAGGCTGGCCTGAAGCTTTTCAGCGAGGCTGTCATCGATACCATCAA
CAAGAGCTCCTCTGGTAACAAGAAGGCCCTCATCGATGAGTACCTGAAGA
AGGCCAAGGGGAAGAGCAACCGCGAAGCCCGGGCTATTGCCAAGGACATC
ACTGGCGTCGACATCTACTGGGACTGGGACGCCCCTCGCACCCGGGAGGG
CTTCTACCGGTACCAGGGAGGTACGCAGTGTGCGGTGAACCGCGCCATTG
CGTATGGCCCATTCGCAGATCTCATCTGGATGGAGAGCAAGCTGCCCGAC
TATGCCCAGGCGAAGGAGTTTGCCGACGGTGTTCACGCCGTGTGGCCCGA
GCAGAAGCTGGCGTACAACCTGTCGCCCTCATTCAACTGGAAGAAGGCGA
TGCCGCGCGATGAGCAGGAGACCTACATCCAGCGCCTGGGAGCCCTGGGA
TACTGCTGGCAGTTCATCACCCTGGCGGGTCTGCACACGACGGCGCTGAT
CACGGATCAGTTTGCCAAGGCGTACGCGAAGCAGGGCATGCGGGCGTACG
GCGAGTTGGTGCAAGAACCCGAGATGGAGCAGGGGGTGGATGTGGTGACT
CACCAGAAATGGAGTGGTGCCAACTACGTGGATAATATGTTGAAGATGGT
GACGGGCGGCATCAGCAGTACGGCCGCCATGGGCAAGGGCGTCACGGAGG
ATCAGTTCAAGCACTGAATGGCTTCCTTTGAAGAAGAAGACCGGAAGTAT
CTGGACGATGTCCAGGCCGTCCAGAAGTGGTGGCAGGACTCCAGATGGAG
ACACACCAAGCGCCCCTTTACTGCTGAGCAGATTGTGGCTAAGCGCGGCA
CCCTGAAGATCGAATACCCTTCCAATGCTATGAGCAAGAAGCTGTGGAAG
ATCTTGGAGAGCAATTTCGAGAAAAAAGTACCTAGCTTCACCTATGGCTG
TCTCGAGCCCACAATGCTCACCCAGATGGCCAAATACCTTGACACCGTCT
ACGTCTCTGGCTGGCAGAGCTCCTCCACCGCCTCGTCCACCGACGAACCC
TCTCCCGACCTTGCCGACTACCCCATGAATACCGTCCCCAACAAGGTCAA
CCAGCTGTTCCTGGCTCAGCTGTTCCATGACCGGAAACAGCGCGAAGAAC
GCATCACCACTCCCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGACTAC
CTCCGCCCCATCATTGCGGATGCCGATACCGGACATGGTGGCTTGACGGC
CGTGATGAAGCTGACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGTATTC
ACATTGAAGACCAGGCTCCGGGAACCAAGAAGTGCGGCCACATGGCCGGA
AAGGTGCTTGTGCCTATCAGCGAACACATCAACCGTCTGGTGGCTATCCG
TGCGCAAGCGGATATCATGGGCACCGATCTGCTTGCCATCGCTCGAACCG
ACTCCGAAGCCGCCACTCTCATTACCTCCACAATTGATTACCGCGATCAT
GCCTTCGTCGTGGGCTCAACAAACCCCAACCTGCAGCCCCTCAACGACCT
CATGGTGGCCGCAGAGCAGGCTGGCAAGAACGGAAACGAGCTGCAAGCCA
TCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCAGCGAGGCT
GTCATCGATACCATCAACAAGAGCTCCTCTGGTAACAAGAAGGCCCTCAT
CGATGAGTACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGAAGCCCGGG
CTATTGCCAAGGACATCACTGGCGTCGACATCTACTGGGACTGGGACGCC
CCTCGCACCCGGGAGGGCTTCTACCGGTACCAGGGAGGTACGCAGTGTGC
GGTGAACCGCGCCATTGCGTATGGCCCATTCGCAGATCTCATCTGGATGG
AGAGCAAGCTGCCCGACTATGCCCAGGCGAAGGAGTTTGCCGACGGTGTT
CACGCCGTGTGGCCCGAGCAGAAGCTGGCGTACAACCTGTCGCCCTCATT
CAACTGGAAGAAGGCGATGCCGCGCGATGAGCAGGAGACCTACATCCAGC
GCCTGGGAGCCCTGGGATACTGCTGGCAGTTCATCACCCTGGCGGGTCTG
CACACGACGGCGCTGATCACGGATCAGTTTGCCAAGGCGTACGCGAAGCA
GGGCATGCGGGCGTACGGCGAGTTGGTGCAAGAACCCGAGATGGAGCAGG
GGGTGGATGTGGTGACTCACCAGAAATGGAGTGGTGCCAACTACGTGGAT
AATATGTTGAAGATGGTGACGGGCGGCATCAGCAGTACGGCCGCCATGGG
CAAGGGCGTCACGGAGGATCAGTTCAAGCACTGAATGGCTTCCTTTGAAG
AAGAAGACCGGAAGTATCTGGACGATGTCCAGGCCGTCCAGAAGTGGTGG
CAGGACTCCAGATGGAGACACACCAAGCGCCCCTTTACTGCTGAGCAGAT
TGTGGCTAAGCGCGGCACCCTGAAGATCGAATACCCTTCCAATGCTATGA
GCAAGAAGCTGTGGAAGATCTTGGAGAGCAATTTCGAGAAAAAAGTACCT
AGCTTCACCTATGGCTGTCTCGAGCCCACAATGCTCACCCAGATGGCCAA
ATACCTTGACACCGTCTACGTCTCTGGCTGGCAGAGCTCCTCCACCGCCT
CGTCCACCGACGAACCCTCTCCCGACCTTGCCGACTACCCCATGAATACC
GTCCCCAACAAGGTCAACCAGCTGTTCCTGGCTCAGCTGTTCCATGACCG
GAAACAGCGCGAAGAACGCATCACCACTCCCAAGGAGCAGCGTGGCAAGG
TGGCAAATGTTGACTACCTCCGCCCCATCATTGCGGATGCCGATACCGGA
CATGGTGGCTTGACGGCCGTGATGAAGCTGACCAAGCTGTTTATTGAGCG
TGGTGCTGCTGGTATTCACATTGAAGACCAGGCTCCGGGAACCAAGAAGT
GCGGCCACATGGCCGGAAAGGTGCTTGTGCCTATCAGCGAACACATCAAC
CGTCTGGTGGCTATCCGTGCGCAAGCGGATATCATGGGCACCGATCTGCT
TGCCATCGCTCGAACCGACTCCGAAGCCGCCACTCTCATTACCTCCACAA
TTGATTACCGCGATCATGCCTTCGTCGTGGGCTCAACAAACCCCAACCTG
CAGCCCCTCAACGACCTCATGGTGGCCGCAGAGCAGGCTGGCAAGAACGG
AAACGAGCTGCAAGCCATCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGA
AGCTTTTCAGCGAGGCTGTCATCGATACCATCAACAAGAGCTCCTCTGGT
AACAAGAAGGCCCTCATCGATGAGTACCTGAAGAAGGCCAAGGGGAAGAG
CAACCGCGAAGCCCGGGCTATTGCCAAGGACATCACTGGCGTCGACATCT
ACTGGGACTGGGACGCCCCTCGCACCCGGGAGGGCTTCTACCGGTACCAG
GGAGGTACGCAGTGTGCGGTGAACCGCGCCATTGCGTATGGCCCATTCGC
AGATCTCATCTGGATGGAGAGCAAGCTGCCCGACTATGCCCAGGCGAAGG
AGTTTGCCGACGGTGTTCACGCCGTGTGGCCCGAGCAGAAGCTGGCGTAC
AACCTGTCGCCCTCATTCAACTGGAAGAAGGCGATGCCGCGCGATGAGCA
GGAGACCTACATCCAGCGCCTGGGAGCCCTGGGATACTGCTGGCAGTTCA
TCACCCTGGCGGGTCTGCACACGACGGCGCTGATCACGGATCAGTTTGCC
AAGGCGTACGCGAAGCAGGGCATGCGGGCGTACGGCGAGTTGGTGCAAGA
ACCCGAGATGGAGCAGGGGGTGGATGTGGTGACTCACCAGAAATGGAGTG
GTGCCAACTACGTGGATAATATGTTGAAGATGGTGACGGGCGGCATCAGC
AGTACGGCCGCCATGGGCAAGGGCGTCACGGAGGATCAGTTCAAGCACTG
AATGGCTTCCTTTGAAGAAGAAGACCGGAAGTATCTGGACGATGTCCAGG
CCGTCCAGAAGTGGTGGCAGGACTCCAGATGGAGACACACCAAGCGCCCC
TTTACTGCTGAGCAGATTGTGGCTAAGCGCGGCACCCTGAAGATCGAATA
CCCTTCCAATGCTATGAGCAAGAAGCTGTGGAAGATCTTGGAGAGCAATT
TCGAGAAAAAAGTACCTAGCTTCACCTATGGCTGTCTCGAGCCCACAATG
CTCACCCAGATGGCCAAATACCTTGACACCGTCTACGTCTCTGGCTGGCA
GAGCTCCTCCACCGCCTCGTCCACCGACGAACCCTCTCCCGACCTTGCCG
ACTACCCCATGAATACCGTCCCCAACAAGGTCAACCAGCTGTTCCTGGCT
CAGCTGTTCCATGACCGGAAACAGCGCGAAGAACGCATCACCACTCCCAA
GGAGCAGCGTGGCAAGGTGGCAAATGTTGACTACCTCCGCCCCATCATTG
CGGATGCCGATACCGGACATGGTGGCTTGACGGCCGTGATGAAGCTGACC
AAGCTGTTTATTGAGCGTGGTGCTGCTGGTATTCACATTGAAGACCAGGC
TCCGGGAACCAAGAAGTGCGGCCACATGGCCGGAAAGGTGCTTGTGCCTA
TCAGCGAACACATCAACCGTCTGGTGGCTATCCGTGCGCAAGCGGATATC
ATGGGCACCGATCTGCTTGCCATCGCTCGAACCGACTCCGAAGCCGCCAC
TCTCATTACCTCCACAATTGATTACCGCGATCATGCCTTCGTCGTGGGCT
CAACAAACCCCAACCTGCAGCCCCTCAACGACCTCATGGTGGCCGCAGAG
CAGGCTGGCAAGAACGGAAACGAGCTGCAAGCCATCGAAGACCAGTGGGT
TGCTCAGGCTGGCCTGAAGCTTTTCAGCGAGGCTGTCATCGATACCATCA
ACAAGAGCTCCTCTGGTAACAAGAAGGCCCTCATCGATGAGTACCTGAAG
AAGGCCAAGGGGAAGAGCAACCGCGAAGCCCGGGCTATTGCCAAGGACAT
CACTGGCGTCGACATCTACTGGGACTGGGACGCCCCTCGCACCCGGGAGG
GCTTCTACCGGTACCAGGGAGGTACGCAGTGTGCGGTGAACCGCGCCATT
GCGTATGGCCCATTCGCAGATCTCATCTGGATGGAGAGCAAGCTGCCCGA
CTATGCCCAGGCGAAGGAGTTTGCCGACGGTGTTCACGCCGTGTGGCCCG
AGCAGAAGCTGGCGTACAACCTGTCGCCCTCATTCAACTGGAAGAAGGCG
ATGCCGCGCGATGAGCAGGAGACCTACATCCAGCGCCTGGGAGCCCTGGG
ATACTGCTGGCAGTTCATCACCCTGGCGGGTCTGCACACGACGGCGCTGA
TCACGGATCAGTTTGCCAAGGCGTACGCGAAGCAGGGCATGCGGGCGTAC
GGCGAGTTGGTGCAAGAACCCGAGATGGAGCAGGGGGTGGATGTGGTGAC
TCACCAGAAATGGAGTGGTGCCAACTACGTGGATAATATGTTGAAGATGG
TGACGGGCGGCATCAGCAGTACGGCCGCCATGGGCAAGGGCGTCACGGAG
GATCAGTTCAAGCACTGAATGGCTTCCTTTGAAGAAGAAGACCGGAAGTA
TCTGGACGATGTCCAGGCCGTCCAGAAGTGGTGGCAGGACTCCAGATGGA
GACACACCAAGCGCCCCTTTACTGCTGAGCAGATTGTGGCTAAGCGCGGC
ACCCTGAAGATCGAATACCCTTCCAATGCTATGAGCAAGAAGCTGTGGAA
GATCTTGGAGAGCAATTTCGAGAAAAAAGTACCTAGCTTCACCTATGGCT
GTCTCGAGCCCACAATGCTCACCCAGATGGCCAAATACCTTGACACCGTC
TACGTCTCTGGCTGGCAGAGCTCCTCCACCGCCTCGTCCACCGACGAACC
CTCTCCCGACCTTGCCGACTACCCCATGAATACCGTCCCCAACAAGGTCA
ACCAGCTGTTCCTGGCTCAGCTGTTCCATGACCGGAAACAGCGCGAAGAA
CGCATCACCACTCCCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGACTA
CCTCCGCCCCATCATTGCGGATGCCGATACCGGACATGGTGGCTTGACGG
CCGTGATGAAGCTGACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGTATT
CACATTGAAGACCAGGCTCCGGGAACCAAGAAGTGCGGCCACATGGCCGG
AAAGGTGCTTGTGCCTATCAGCGAACACATCAACCGTCTGGTGGCTATCC
GTGCGCAAGCGGATATCATGGGCACCGATCTGCTTGCCATCGCTCGAACC
GACTCCGAAGCCGCCACTCTCATTACCTCCACAATTGATTACCGCGATCA
TGCCTTCGTCGTGGGCTCAACAAACCCCAACCTGCAGCCCCTCAACGACC
TCATGGTGGCCGCAGAGCAGGCTGGCAAGAACGGAAACGAGCTGCAAGCC
ATCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCAGCGAGGC
TGTCATCGATACCATCAACAAGAGCTCCTCTGGTAACAAGAAGGCCCTCA
TCGATGAGTACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGAAGCCCGG
GCTATTGCCAAGGACATCACTGGCGTCGACATCTACTGGGACTGGGACGC
CCCTCGCACCCGGGAGGGCTTCTACCGGTACCAGGGAGGTACGCAGTGTG
CGGTGAACCGCGCCATTGCGTATGGCCCATTCGCAGATCTCATCTGGATG
GAGAGCAAGCTGCCCGACTATGCCCAGGCGAAGGAGTTTGCCGACGGTGT
TCACGCCGTGTGGCCCGAGCAGAAGCTGGCGTACAACCTGTCGCCCTCAT
TCAACTGGAAGAAGGCGATGCCGCGCGATGAGCAGGAGACCTACATCCAG
CGCCTGGGAGCCCTGGGATACTGCTGGCAGTTCATCACCCTGGCGGGTCT
GCACACGACGGCGCTGATCACGGATCAGTTTGCCAAGGCGTACGCGAAGC
AGGGCATGCGGGCGTACGGCGAGTTGGTGCAAGAACCCGAGATGGAGCAG
GGGGTGGATGTGGTGACTCACCAGAAATGGAGTGGTGCCAACTACGTGGA
TAATATGTTGAAGATGGTGACGGGCGGCATCAGCAGTACGGCCGCCATGG
GCAAGGGCGTCACGGAGGATCAGTTCAAGCACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004451 | isocitrate lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_15880-T1 | ATCC64974_15880-T1-protein | Aspergillus niger N402 | polypeptide |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR018523 |
| DBxref | InterPro:IPR006254 |
| DBxref | InterPro:IPR040442 |
| DBxref | PFAM:PF13714 |
| DBxref | PFAM:PF00463 |
| Product | isocitrate lyase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1414836..1416685 + |
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