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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1486562..1488603- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_16110-T1 ID=ATCC64974_16110-T1|Name=ATCC64974_16110-T1|organism=Aspergillus niger N402|type=mRNA|length=2042bp|location=Sequence derived from alignment at OGUI01000003.1:1486562..1488603- (Aspergillus niger N402)
ATGGCACAAATGGCTCCTGCCGCCCGCCGTAAAATTCTCTCCGCGAAATC
TGAAGGAAATCCGATGAAACTTGCAGCAGCAGCTCTTCAAACGCCTCAAC
CTCCTGCTCCCTCCCCTTCCATTCCGTCTTCTCCCAGGATGCCTGATTCT
TCATCCGACGACAACGATTCCAGAACCGCCGCAGTCGGCCCCCGCGCTCA
GACAAACGGCTCCCGCCACTCCTCGCGTCAGAGCTCCCACGATCCCAACC
CGAACCCGCGGAAAAGGCAACGCCGCAGTCGGTCCGCCGACGTACGCAAT
GTCCGCGATTTCGTCCCCCAAGGCGCTACCTTCAGTGAAGCGGGACTTGA
TGTTGATGTAGATGCTACTTCATCTTCCGGTTCCGAGAGTGACGACGGGT
CCTCCGAAGGTGGTGATGCGCAGGCCGAGTCCGCGCCCGCGCCGCCGGCG
AGCTGGAATAAAGGCAGCAAGAGTGCGATTCGGACATCGCTTCGCAGTCG
CGCGAAGCCAGAGGAGAGCAAGCCCGCGTCACAGTTCGACACTGTCAATG
ATAAGTTCTGGCGCAGTCGCAGTGAATCCGTCTCGTCCCATGGCGATCAC
GAGACGGAAGCATCAAAACCCGCCCAAGTCGATGGCATAGAGGAGGGCGA
AGTGAATGAGGAGGAAGCTTCGGACGAGTCCAGCCAGATGCAGCTCTCCG
GCGACTCAGATGACTCGGAGTCTCTGGGTTCGGAAGCAGATGACTCGATC
TTGTTGAATATTGGGTCCCGGAACGGTCAAAATCTCGGTCAGGACCAGGA
TGGCTTAATCACCCCGGACGGCGACGACGACTACGACCCCGAGGCATTAC
CAGTCTCTAACGGCACGAAAACCAACGGACAAACCTCCACAAACCAATCT
AAAGAGGACGCGCTCCTCCGCTTCTCGAAAAAGTACCCGACTGCCCCTTC
TACCCTCGCCGACCTCGACCGCGAAGACATGGACATCCAAGCGAAATACC
GCTTCTACGACCGCGACGTTAACGCCATCGACCTACAACTTCCCATAGCC
TGCACAGAATGTCTACTCGAGGGGCACCTCGCAGAAGTGTGCCCGTCCCG
AGAGGTACGCCCACCCCTCCCTCTCCCTCTTCCCCGTCATTATCACCAAC
TAACCAACCATTCTAGTGCATACACTGCGGCTCCTGGAACCAGCATCAAA
GCAGCTTCTGCCCGACCTGGCGCCGCTGCCAACGGTGTCGCGCGCGCGGC
CACGACGAAGACAACTGCCCATCCGCACTGAAAGGCTCCGCCAGCGAATT
TCCGTGCGAACTTTGCGGCTCGACCACGCATATCGAAGAAGACTGCGACC
TGATGTGGAAGCTCACTACTACCCGGCCGGACTCCGAACCCGTCCTCGTC
TCCCTCTCCTGCGCCCACTGCACCAGCAACCGCCACCTCATTGGCGACTG
TCCGTCCCTCTCATCCACCCGAACCCTGCTCTCCTCCTCCTGGACCGTCC
GCGGCATCGACCCCAACATGATCACCAACATCAACTCCGTCGTGAACCAC
CGACGTAACAACAACAATAACAACAATAGCAATAGCAATAACAGAGGAGG
CCTCAAGATCCGCGGCCGCGCCGACCACCGCCCGCCTTCCTCCGACAGCG
ACGACATGATGGCTCATCGGCGTCCGCCTGTCCATCGCGGCGGCGGCGGT
AGCAACCGTGGCAACATTCGCATTGGAAGCGGCATCGGCAGAGGGAATAA
GAATATTTCGAGTAATGGGTATCGCGATAGATCTGATTTCGGCCCGTCGA
GGCAGCGGTCGATGTCGCCGAATCCTCGTCCGGCGCGCGGGAGAGGTGGG
AAGGATAGTTGGCAGGGGGGTGGTGGACGGGGTAAGTCGTCGGGTGGCGG
TGGTGGTGGTAGCCGGCCTCCGTCTAGAGGTGGGAATACGGGTCGTGGGG
GTGGACGTGGTGGGAAGAGAGGTGGTGGTGGGGATGCGTATCGACCGTTG
CCGAGTGCGGCGAAGAAGGCGTGGGATAAGTATCGGTTGTGA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1486562..1488603- >ATCC64974_16110-T1 ID=ATCC64974_16110-T1|Name=ATCC64974_16110-T1|organism=Aspergillus niger N402|type=CDS|length=3960bp|location=Sequence derived from alignment at OGUI01000003.1:1486562..1488603- (Aspergillus niger N402)
TGCATACACTGCGGCTCCTGGAACCAGCATCAAAGCAGCTTCTGCCCGAC
CTGGCGCCGCTGCCAACGGTGTCGCGCGCGCGGCCACGACGAAGACAACT
GCCCATCCGCACTGAAAGGCTCCGCCAGCGAATTTCCGTGCGAACTTTGC
GGCTCGACCACGCATATCGAAGAAGACTGCGACCTGATGTGGAAGCTCAC
TACTACCCGGCCGGACTCCGAACCCGTCCTCGTCTCCCTCTCCTGCGCCC
ACTGCACCAGCAACCGCCACCTCATTGGCGACTGTCCGTCCCTCTCATCC
ACCCGAACCCTGCTCTCCTCCTCCTGGACCGTCCGCGGCATCGACCCCAA
CATGATCACCAACATCAACTCCGTCGTGAACCACCGACGTAACAACAACA
ATAACAACAATAGCAATAGCAATAACAGAGGAGGCCTCAAGATCCGCGGC
CGCGCCGACCACCGCCCGCCTTCCTCCGACAGCGACGACATGATGGCTCA
TCGGCGTCCGCCTGTCCATCGCGGCGGCGGCGGTAGCAACCGTGGCAACA
TTCGCATTGGAAGCGGCATCGGCAGAGGGAATAAGAATATTTCGAGTAAT
GGGTATCGCGATAGATCTGATTTCGGCCCGTCGAGGCAGCGGTCGATGTC
GCCGAATCCTCGTCCGGCGCGCGGGAGAGGTGGGAAGGATAGTTGGCAGG
GGGGTGGTGGACGGGGTAAGTCGTCGGGTGGCGGTGGTGGTGGTAGCCGG
CCTCCGTCTAGAGGTGGGAATACGGGTCGTGGGGGTGGACGTGGTGGGAA
GAGAGGTGGTGGTGGGGATGCGTATCGACCGTTGCCGAGTGCGGCGAAGA
AGGCGTGGGATAAGTATCGGTTGTGAATGGCACAAATGGCTCCTGCCGCC
CGCCGTAAAATTCTCTCCGCGAAATCTGAAGGAAATCCGATGAAACTTGC
AGCAGCAGCTCTTCAAACGCCTCAACCTCCTGCTCCCTCCCCTTCCATTC
CGTCTTCTCCCAGGATGCCTGATTCTTCATCCGACGACAACGATTCCAGA
ACCGCCGCAGTCGGCCCCCGCGCTCAGACAAACGGCTCCCGCCACTCCTC
GCGTCAGAGCTCCCACGATCCCAACCCGAACCCGCGGAAAAGGCAACGCC
GCAGTCGGTCCGCCGACGTACGCAATGTCCGCGATTTCGTCCCCCAAGGC
GCTACCTTCAGTGAAGCGGGACTTGATGTTGATGTAGATGCTACTTCATC
TTCCGGTTCCGAGAGTGACGACGGGTCCTCCGAAGGTGGTGATGCGCAGG
CCGAGTCCGCGCCCGCGCCGCCGGCGAGCTGGAATAAAGGCAGCAAGAGT
GCGATTCGGACATCGCTTCGCAGTCGCGCGAAGCCAGAGGAGAGCAAGCC
CGCGTCACAGTTCGACACTGTCAATGATAAGTTCTGGCGCAGTCGCAGTG
AATCCGTCTCGTCCCATGGCGATCACGAGACGGAAGCATCAAAACCCGCC
CAAGTCGATGGCATAGAGGAGGGCGAAGTGAATGAGGAGGAAGCTTCGGA
CGAGTCCAGCCAGATGCAGCTCTCCGGCGACTCAGATGACTCGGAGTCTC
TGGGTTCGGAAGCAGATGACTCGATCTTGTTGAATATTGGGTCCCGGAAC
GGTCAAAATCTCGGTCAGGACCAGGATGGCTTAATCACCCCGGACGGCGA
CGACGACTACGACCCCGAGGCATTACCAGTCTCTAACGGCACGAAAACCA
ACGGACAAACCTCCACAAACCAATCTAAAGAGGACGCGCTCCTCCGCTTC
TCGAAAAAGTACCCGACTGCCCCTTCTACCCTCGCCGACCTCGACCGCGA
AGACATGGACATCCAAGCGAAATACCGCTTCTACGACCGCGACGTTAACG
CCATCGACCTACAACTTCCCATAGCCTGCACAGAATGTCTACTCGAGGGG
CACCTCGCAGAAGTGTGCCCGTCCCGAGAGTGCATACACTGCGGCTCCTG
GAACCAGCATCAAAGCAGCTTCTGCCCGACCTGGCGCCGCTGCCAACGGT
GTCGCGCGCGCGGCCACGACGAAGACAACTGCCCATCCGCACTGAAAGGC
TCCGCCAGCGAATTTCCGTGCGAACTTTGCGGCTCGACCACGCATATCGA
AGAAGACTGCGACCTGATGTGGAAGCTCACTACTACCCGGCCGGACTCCG
AACCCGTCCTCGTCTCCCTCTCCTGCGCCCACTGCACCAGCAACCGCCAC
CTCATTGGCGACTGTCCGTCCCTCTCATCCACCCGAACCCTGCTCTCCTC
CTCCTGGACCGTCCGCGGCATCGACCCCAACATGATCACCAACATCAACT
CCGTCGTGAACCACCGACGTAACAACAACAATAACAACAATAGCAATAGC
AATAACAGAGGAGGCCTCAAGATCCGCGGCCGCGCCGACCACCGCCCGCC
TTCCTCCGACAGCGACGACATGATGGCTCATCGGCGTCCGCCTGTCCATC
GCGGCGGCGGCGGTAGCAACCGTGGCAACATTCGCATTGGAAGCGGCATC
GGCAGAGGGAATAAGAATATTTCGAGTAATGGGTATCGCGATAGATCTGA
TTTCGGCCCGTCGAGGCAGCGGTCGATGTCGCCGAATCCTCGTCCGGCGC
GCGGGAGAGGTGGGAAGGATAGTTGGCAGGGGGGTGGTGGACGGGGTAAG
TCGTCGGGTGGCGGTGGTGGTGGTAGCCGGCCTCCGTCTAGAGGTGGGAA
TACGGGTCGTGGGGGTGGACGTGGTGGGAAGAGAGGTGGTGGTGGGGATG
CGTATCGACCGTTGCCGAGTGCGGCGAAGAAGGCGTGGGATAAGTATCGG
TTGTGAATGGCACAAATGGCTCCTGCCGCCCGCCGTAAAATTCTCTCCGC
GAAATCTGAAGGAAATCCGATGAAACTTGCAGCAGCAGCTCTTCAAACGC
CTCAACCTCCTGCTCCCTCCCCTTCCATTCCGTCTTCTCCCAGGATGCCT
GATTCTTCATCCGACGACAACGATTCCAGAACCGCCGCAGTCGGCCCCCG
CGCTCAGACAAACGGCTCCCGCCACTCCTCGCGTCAGAGCTCCCACGATC
CCAACCCGAACCCGCGGAAAAGGCAACGCCGCAGTCGGTCCGCCGACGTA
CGCAATGTCCGCGATTTCGTCCCCCAAGGCGCTACCTTCAGTGAAGCGGG
ACTTGATGTTGATGTAGATGCTACTTCATCTTCCGGTTCCGAGAGTGACG
ACGGGTCCTCCGAAGGTGGTGATGCGCAGGCCGAGTCCGCGCCCGCGCCG
CCGGCGAGCTGGAATAAAGGCAGCAAGAGTGCGATTCGGACATCGCTTCG
CAGTCGCGCGAAGCCAGAGGAGAGCAAGCCCGCGTCACAGTTCGACACTG
TCAATGATAAGTTCTGGCGCAGTCGCAGTGAATCCGTCTCGTCCCATGGC
GATCACGAGACGGAAGCATCAAAACCCGCCCAAGTCGATGGCATAGAGGA
GGGCGAAGTGAATGAGGAGGAAGCTTCGGACGAGTCCAGCCAGATGCAGC
TCTCCGGCGACTCAGATGACTCGGAGTCTCTGGGTTCGGAAGCAGATGAC
TCGATCTTGTTGAATATTGGGTCCCGGAACGGTCAAAATCTCGGTCAGGA
CCAGGATGGCTTAATCACCCCGGACGGCGACGACGACTACGACCCCGAGG
CATTACCAGTCTCTAACGGCACGAAAACCAACGGACAAACCTCCACAAAC
CAATCTAAAGAGGACGCGCTCCTCCGCTTCTCGAAAAAGTACCCGACTGC
CCCTTCTACCCTCGCCGACCTCGACCGCGAAGACATGGACATCCAAGCGA
AATACCGCTTCTACGACCGCGACGTTAACGCCATCGACCTACAACTTCCC
ATAGCCTGCACAGAATGTCTACTCGAGGGGCACCTCGCAGAAGTGTGCCC
GTCCCGAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_16110-T1 | ATCC64974_16110-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001878 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1486562..1488603 - |
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