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ATCC64974_16450-T1, ATCC64974_16450-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_16450-T1
Unique NameATCC64974_16450-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1595166..1595934-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_16450-T1 ID=ATCC64974_16450-T1|Name=ATCC64974_16450-T1|organism=Aspergillus niger N402|type=mRNA|length=769bp|location=Sequence derived from alignment at OGUI01000003.1:1595166..1595934- (Aspergillus niger N402)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTGTGCGTA
AAACACCTTTCAAACTCAACTTCAAGATTCTAGCTCCCTTAATCTCCAAA
CCCGGAACCTCCCAGAGCTACCCTATCTAGATCCGAGCAAACAACCAAGC
TAACCACTGCAACCAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTT
TCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGG
TCTCCGTTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGG
TCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAA
CGCTTCTTCTGGCTGAGTCTATACGTGACGCCTGCACTATGGATCGGTCT
CGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTG
TTGGTGAGTTTATCCTTGCACTCGTTCTCCCAGCAGGTATATAAGGAGCG
TGGATGCTAACTGTATACAGCCATTGCCCTCGCCTTGACCATCACCAACA
CTGTTGCGTTTTCCCGGTGCGATCGCTTCAGTCAGGCTTCTACCTTCGCG
AATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGGAGGCCTGCT
GGGCAGGCTTTTCAAGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:1595166..1595934-

>ATCC64974_16450-T1 ID=ATCC64974_16450-T1|Name=ATCC64974_16450-T1|organism=Aspergillus niger N402|type=CDS|length=1737bp|location=Sequence derived from alignment at OGUI01000003.1:1595166..1595934- (Aspergillus niger N402)
CCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTTTCCCGGTGC
GATCGCTTCAGTCAGGCTTCTACCTTCGCGAATAGTGCGCTTTCGGGTGG
AGTTATGAGTAACCTTGCGGGAGGCCTGCTGGGCAGGCTTTTCAAGTAGC
GTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTACTA
CCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGTTGGTGGAACG
AAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCGAT
CCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGCTGAG
TCTATACGTGACGCCTGCACTATGGATCGGTCTCGCCATTTTGGCCATTA
TTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGATGGAACAACAACC
GCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGCCCATCCGA
TTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTACTGATGTAC
CTCTTCGGCGTGCTCTTTATCAAGAACTTCCATTGCCCTCGCCTTGACCA
TCACCAACACTGTTGCGTTTTCCCGGTGCGATCGCTTCAGTCAGGCTTCT
ACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGG
AGGCCTGCTGGGCAGGCTTTTCAAGTAGCGTCCTCGTCTTCATCATCACC
CTCCTCATCCTTTCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCG
CCGACTGGTCGGTCTCCGTTGGTGGAACGAAGTCAACACTTCCTCCGGCG
ACTCTACTTGGGTCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACC
GCCACGGACAAACGCTTCTTCTGGCTGAGTCTATACGTGACGCCTGCACT
ATGGATCGGTCTCGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTT
GGTTGAGTCTTGTTGATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGA
ACTGAACTGGCGCCTCAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGG
GCTTTCGCATCGGCGCCCTACTGATGTACCTCTTCGGCGTGCTCTTTATC
AAGAACTTCCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTTT
CCCGGTGCGATCGCTTCAGTCAGGCTTCTACCTTCGCGAATAGTGCGCTT
TCGGGTGGAGTTATGAGTAACCTTGCGGGAGGCCTGCTGGGCAGGCTTTT
CAAGTAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGAT
TTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGTTG
GTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGT
CCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTC
TGGCTGAGTCTATACGTGACGCCTGCACTATGGATCGGTCTCGCCATTTT
GGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGATGGAA
CAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGC
CCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTAC
TGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP23ATCC64974_16450Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16450-T1ATCC64974_16450-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16450-T1.cdsATCC64974_16450-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16450-T1.exon3ATCC64974_16450-T1.exon3Aspergillus niger N402exon
ATCC64974_16450-T1.exon2ATCC64974_16450-T1.exon2Aspergillus niger N402exon
ATCC64974_16450-T1.exon1ATCC64974_16450-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008564
DBxrefPFAM:PF05832
ProductGolgi apparatus membrane protein tvp23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1595166..1595934 -
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