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ATCC64974_16730-T1, ATCC64974_16730-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_16730-T1
Unique NameATCC64974_16730-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1680267..1682373+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_16730-T1 ID=ATCC64974_16730-T1|Name=ATCC64974_16730-T1|organism=Aspergillus niger N402|type=mRNA|length=2107bp|location=Sequence derived from alignment at OGUI01000003.1:1680267..1682373+ (Aspergillus niger N402)
ATGTACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCA
GGCCCACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCC
ATCACCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAA
GCCTCTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGC
TGCCGCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATG
TTAATGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAG
CAACTCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTA
CGCCCGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCC
AGCCTGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAG
TCCAAGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACA
GGGTCTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGA
AATTGTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGT
CAACTGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGA
GCTCCCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCT
TCGATAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGA
TTAGAGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTC
TCAGATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAG
AAATGCCAGGTTTGTGCTCACGACTTAAAGCTCTCACCATGCACTTCAGA
CTAACTTTGTCTCCAAAAAGTTCATCTTCCTCCCCCGGATAGAGATTGGA
TCATCCTGGACGAGACCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATT
ACCGTCCTTTCCCACAATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCA
CTTCGGTTATACCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGC
TTATCCTGAGCGAGCTGAGGTCGCACGACTCGGACATTATATGTCTCCAG
GAGATCGACCAAGGCAGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTA
TAACGATTACAAGGGTGTATACTGGCCCAGAGGCAGAGCCATGGGTATGC
AGGAGGAGGAAGCGAAGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGA
AGCAAGTTCATCCTCCTCGATAAGCAGATGATCAACTTCGGTCAAACAGC
AGTGCGGCGACCGGATGCCAAGGGTCAAGATGACATCTACAACAGACTCT
GGCAGAAGGATCATATTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACA
GGCTCCCGCTTTATCGTCGTGAACGCGCATCTCTACTGGGATCCCGCTTT
CAAGGACGTGAAGTTGATTCAGACCGCCATTTTGATGGAGGAAATCACCA
AACTCTCCGAGAAGTACGCGAAATTCCCGCCATGTACCGACAAGACTGCC
TTCCGCTTCTCGGAAGCAGAAGGTGAGTCGGACACTCCTCCACCTGAACC
TGCGCCATCTGTGGAGTATGCCAGTGGTGATCAGATCCCGCTTTTCATGT
GCGGAGACTTCAACTCGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCA
CACGGCCGGCTCACGGAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGG
CAACCTTAGTCGGGTCGGTATGACGCACCCGTTCAAGCTGAAGTCGGCAT
ACAACTCGATTGGCGAGCTGAGCTTCACGAACTACACTCCGGACTTCAAA
GATATTCTTGACTATATTTGGTATACTTCCAACACACTTCATGTCTCGGC
GTTACTTGGGGAGGTGGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCC
CCAATTTTCATTTTCCAAGTGATCATGTCGCATTATTTGCGGAGTTTACA
GTTAAAGGGAAAAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACG
GAATTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1680267..1682373+

>ATCC64974_16730-T1 ID=ATCC64974_16730-T1|Name=ATCC64974_16730-T1|organism=Aspergillus niger N402|type=CDS|length=4092bp|location=Sequence derived from alignment at OGUI01000003.1:1680267..1682373+ (Aspergillus niger N402)
ATGTACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCA
GGCCCACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCC
ATCACCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAA
GCCTCTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGC
TGCCGCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATG
TTAATGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAG
CAACTCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTA
CGCCCGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCC
AGCCTGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAG
TCCAAGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACA
GGGTCTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGA
AATTGTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGT
CAACTGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGA
GCTCCCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCT
TCGATAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGA
TTAGAGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTC
TCAGATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAG
AAATGCCAGTTCATCTTCCTCCCCCGGATAGAGATTGGATCATCCTGGAC
GAGACCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATTACCGTCCTTTC
CCACAATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCACTTCGGTTATA
CCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGCTTATCCTGAGC
GAGCTGAGGTCGCACGACTCGGACATTATATGTCTCCAGGAGATCGACCA
AGGCAGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTATAACGATTACA
AGGGTGTATACTGGCCCAGAGGCAGAGCCATGGGTATGCAGGAGGAGGAA
GCGAAGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGAAGCAAGTTCAT
CCTCCTCGATAAGCAGATGATCAACTTCGGTCAAACAGCAGTGCGGCGAC
CGGATGCCAAGGGTCAAGATGACATCTACAACAGACTCTGGCAGAAGGAT
CATATTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACAGGCTCCCGCTT
TATCGTCGTGAACGCGCATCTCTACTGGGATCCCGCTTTCAAGGACGTGA
AGTTGATTCAGACCGCCATTTTGATGGAGGAAATCACCAAACTCTCCGAG
AAGTACGCGAAATTCCCGCCATGTACCGACAAGACTGCCTTCCGCTTCTC
GGAAGCAGAAGGTGAGTCGGACACTCCTCCACCTGAACCTGCGCCATCTG
TGGAGTATGCCAGTGGTGATCAGATCCCGCTTTTCATGTGCGGAGACTTC
AACTCGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCACACGGCCGGCT
CACGGAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGGCAACCTTAGTC
GGGTCGGTATGACGCACCCGTTCAAGCTGAAGTCGGCATACAACTCGATT
GGCGAGCTGAGCTTCACGAACTACACTCCGGACTTCAAAGATATTCTTGA
CTATATTTGGTATACTTCCAACACACTTCATGTCTCGGCGTTACTTGGGG
AGGTGGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCCCCAATTTTCAT
TTTCCAAGTGATCATGTCGCATTATTTGCGGAGTTTACAGTTAAAGGGAA
AAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACGGAATTGAATGT
ACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCAGGCC
CACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCCATCA
CCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAAGCCT
CTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGCTGCC
GCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATGTTAA
TGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAGCAAC
TCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTACGCC
CGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCCAGCC
TGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAGTCCA
AGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACAGGGT
CTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGAAATT
GTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGTCAAC
TGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGAGCTC
CCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCTTCGA
TAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGATTAG
AGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTCTCAG
ATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAGAAAT
GCCAGTTCATCTTCCTCCCCCGGATAGAGATTGGATCATCCTGGACGAGA
CCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATTACCGTCCTTTCCCAC
AATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCACTTCGGTTATACCCC
GTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGCTTATCCTGAGCGAGC
TGAGGTCGCACGACTCGGACATTATATGTCTCCAGGAGATCGACCAAGGC
AGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTATAACGATTACAAGGG
TGTATACTGGCCCAGAGGCAGAGCCATGGGTATGCAGGAGGAGGAAGCGA
AGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGAAGCAAGTTCATCCTC
CTCGATAAGCAGATGATCAACTTCGGTCAAACAGCAGTGCGGCGACCGGA
TGCCAAGGGTCAAGATGACATCTACAACAGACTCTGGCAGAAGGATCATA
TTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACAGGCTCCCGCTTTATC
GTCGTGAACGCGCATCTCTACTGGGATCCCGCTTTCAAGGACGTGAAGTT
GATTCAGACCGCCATTTTGATGGAGGAAATCACCAAACTCTCCGAGAAGT
ACGCGAAATTCCCGCCATGTACCGACAAGACTGCCTTCCGCTTCTCGGAA
GCAGAAGGTGAGTCGGACACTCCTCCACCTGAACCTGCGCCATCTGTGGA
GTATGCCAGTGGTGATCAGATCCCGCTTTTCATGTGCGGAGACTTCAACT
CGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCACACGGCCGGCTCACG
GAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGGCAACCTTAGTCGGGT
CGGTATGACGCACCCGTTCAAGCTGAAGTCGGCATACAACTCGATTGGCG
AGCTGAGCTTCACGAACTACACTCCGGACTTCAAAGATATTCTTGACTAT
ATTTGGTATACTTCCAACACACTTCATGTCTCGGCGTTACTTGGGGAGGT
GGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCCCCAATTTTCATTTTC
CAAGTGATCATGTCGCATTATTTGCGGAGTTTACAGTTAAAGGGAAAAAG
GGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACGGAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CCR4ATCC64974_16730Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16730-T1.exon1ATCC64974_16730-T1.exon1Aspergillus niger N402exon
ATCC64974_16730-T1.exon2ATCC64974_16730-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16730-T1.cdsATCC64974_16730-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16730-T1ATCC64974_16730-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260WGT
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR036691
DBxrefInterPro:IPR005135
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR003591
DBxrefPFAM:PF13855
DBxrefPFAM:PF12799
DBxrefPFAM:PF03372
ProductGlucose-repressible alcohol dehydrogenase transcriptional effector
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1680267..1682373 +
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