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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000001.1:530454..531767- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_1690-T1 ID=ATCC64974_1690-T1|Name=ATCC64974_1690-T1|organism=Aspergillus niger N402|type=mRNA|length=1314bp|location=Sequence derived from alignment at OGUI01000001.1:530454..531767- (Aspergillus niger N402)
ATGCCACCTCAAACCCGAGCGATTCAACATAGCGAAAGTGTGGGGGAGAA
AAAGCGGAAACCTCTGCGCCGTGACCCGGAGAAGAGGCGGCAACAGAACA
TTCAAGCCCAACGCAGATACCGTAAGTGCGGGTCTCATTTGGAGTCACCA
CATCGGAGATTAGCTAGCAAAAGTAATTACTAATTACGTACTCGTTTAGG
AGAAAAGCTTCGTGAGCGCTTAGGTCGCCTCGAAGCGCTGGCAGAGTCTG
CGGGACAGACCCCGGCCATTAAAAGCACCCCAGCTGCTGGCATACAACCA
AGTGGGGCGATCACAGCGTCTGGCCTACCCAACACTTCAAGTAGTATCGT
TCCAAAGACCCTTCCACTCTATGATGCTTCGGATGTATCGGTTCCGTCAA
CATCTGTGGCCACTCTTGGTAATTGCCAGCAACTTATCCCAGCTTCAGCT
GAGAGTCCATCGGCACTATACACATCAGATTCCACCATAACACCCTATCT
ATATTCTGATGAATCTCCCTCAGCCCTAACTGTGTGGGACCCTCCATCAT
GTGTCGATCCCTCTCTTCTCGTTAGCGATAAGCCCAGTGACAGCCTGGAG
TTGTACTGGACAACCACCATTGACTGCGGCTGTACCAGCCCGCATTTCCG
AATACAGACAGAATGTCCAGACCTTCTCGGCCATAATGAAGTCAGAGTAT
TCAGATTTGGCACGAATACAACTACAGCCGATCCATATACCAACAGTCTT
CGCATCGACAGAGTTTGCACCATCGCTGCAATTCTTGATCTTGTCAGGCA
TGTGGGTGTTACAGAGGAAGCGTTATGTGCTGACGAATCCCTCTCGCCAT
TCTTTCGGCCCACTGCGGTGATGGTAGACGAGGCAGCCAAGAGGAATCTG
ATCCGCACAGTACAGGAAACTTTCAAGTCTCTAAAGCCAGATCTGAGGCC
ATTCCAAGAACAAATTACTATTGAGCACCATCCGATGATAGACATTCTAC
CATTCCGAACGCTACGAAGGAACCTCATCACTCGCCAGCACGATATAGAT
GAGGATGAGTTCTTCGACGATATGCTTTCTGGCTTAGTGTGCTGGGGAGG
TGCGGGCATTGGGAAGAGGGATCGGCAAGTCTCCACTGGGTATGCTTCGA
CTGGTACGCCGTGGGATGTCCGTAGTTGGGAAGCAAAGGTATGGTTCTTG
AAGAAGTATTGGTCTCTTTTGGGTGGCGAAGATGGTGAACTTGTACGACA
AAGTGAATGGTGGCGCAGTATTAGGGGAGACGACATTGAGCAGGAGAATA
TGTGGTTAGGATAG back to topCoding sequence (CDS) from alignment at OGUI01000001.1:530454..531767- >ATCC64974_1690-T1 ID=ATCC64974_1690-T1|Name=ATCC64974_1690-T1|organism=Aspergillus niger N402|type=CDS|length=2472bp|location=Sequence derived from alignment at OGUI01000001.1:530454..531767- (Aspergillus niger N402)
GAGAAAAGCTTCGTGAGCGCTTAGGTCGCCTCGAAGCGCTGGCAGAGTCT
GCGGGACAGACCCCGGCCATTAAAAGCACCCCAGCTGCTGGCATACAACC
AAGTGGGGCGATCACAGCGTCTGGCCTACCCAACACTTCAAGTAGTATCG
TTCCAAAGACCCTTCCACTCTATGATGCTTCGGATGTATCGGTTCCGTCA
ACATCTGTGGCCACTCTTGGTAATTGCCAGCAACTTATCCCAGCTTCAGC
TGAGAGTCCATCGGCACTATACACATCAGATTCCACCATAACACCCTATC
TATATTCTGATGAATCTCCCTCAGCCCTAACTGTGTGGGACCCTCCATCA
TGTGTCGATCCCTCTCTTCTCGTTAGCGATAAGCCCAGTGACAGCCTGGA
GTTGTACTGGACAACCACCATTGACTGCGGCTGTACCAGCCCGCATTTCC
GAATACAGACAGAATGTCCAGACCTTCTCGGCCATAATGAAGTCAGAGTA
TTCAGATTTGGCACGAATACAACTACAGCCGATCCATATACCAACAGTCT
TCGCATCGACAGAGTTTGCACCATCGCTGCAATTCTTGATCTTGTCAGGC
ATGTGGGTGTTACAGAGGAAGCGTTATGTGCTGACGAATCCCTCTCGCCA
TTCTTTCGGCCCACTGCGGTGATGGTAGACGAGGCAGCCAAGAGGAATCT
GATCCGCACAGTACAGGAAACTTTCAAGTCTCTAAAGCCAGATCTGAGGC
CATTCCAAGAACAAATTACTATTGAGCACCATCCGATGATAGACATTCTA
CCATTCCGAACGCTACGAAGGAACCTCATCACTCGCCAGCACGATATAGA
TGAGGATGAGTTCTTCGACGATATGCTTTCTGGCTTAGTGTGCTGGGGAG
GTGCGGGCATTGGGAAGAGGGATCGGCAAGTCTCCACTGGGTATGCTTCG
ACTGGTACGCCGTGGGATGTCCGTAGTTGGGAAGCAAAGGTATGGTTCTT
GAAGAAGTATTGGTCTCTTTTGGGTGGCGAAGATGGTGAACTTGTACGAC
AAAGTGAATGGTGGCGCAGTATTAGGGGAGACGACATTGAGCAGGAGAAT
ATGTGGTTAGGATAGATGCCACCTCAAACCCGAGCGATTCAACATAGCGA
AAGTGTGGGGGAGAAAAAGCGGAAACCTCTGCGCCGTGACCCGGAGAAGA
GGCGGCAACAGAACATTCAAGCCCAACGCAGATACCGAGAAAAGCTTCGT
GAGCGCTTAGGTCGCCTCGAAGCGCTGGCAGAGTCTGCGGGACAGACCCC
GGCCATTAAAAGCACCCCAGCTGCTGGCATACAACCAAGTGGGGCGATCA
CAGCGTCTGGCCTACCCAACACTTCAAGTAGTATCGTTCCAAAGACCCTT
CCACTCTATGATGCTTCGGATGTATCGGTTCCGTCAACATCTGTGGCCAC
TCTTGGTAATTGCCAGCAACTTATCCCAGCTTCAGCTGAGAGTCCATCGG
CACTATACACATCAGATTCCACCATAACACCCTATCTATATTCTGATGAA
TCTCCCTCAGCCCTAACTGTGTGGGACCCTCCATCATGTGTCGATCCCTC
TCTTCTCGTTAGCGATAAGCCCAGTGACAGCCTGGAGTTGTACTGGACAA
CCACCATTGACTGCGGCTGTACCAGCCCGCATTTCCGAATACAGACAGAA
TGTCCAGACCTTCTCGGCCATAATGAAGTCAGAGTATTCAGATTTGGCAC
GAATACAACTACAGCCGATCCATATACCAACAGTCTTCGCATCGACAGAG
TTTGCACCATCGCTGCAATTCTTGATCTTGTCAGGCATGTGGGTGTTACA
GAGGAAGCGTTATGTGCTGACGAATCCCTCTCGCCATTCTTTCGGCCCAC
TGCGGTGATGGTAGACGAGGCAGCCAAGAGGAATCTGATCCGCACAGTAC
AGGAAACTTTCAAGTCTCTAAAGCCAGATCTGAGGCCATTCCAAGAACAA
ATTACTATTGAGCACCATCCGATGATAGACATTCTACCATTCCGAACGCT
ACGAAGGAACCTCATCACTCGCCAGCACGATATAGATGAGGATGAGTTCT
TCGACGATATGCTTTCTGGCTTAGTGTGCTGGGGAGGTGCGGGCATTGGG
AAGAGGGATCGGCAAGTCTCCACTGGGTATGCTTCGACTGGTACGCCGTG
GGATGTCCGTAGTTGGGAAGCAAAGGTATGGTTCTTGAAGAAGTATTGGT
CTCTTTTGGGTGGCGAAGATGGTGAACTTGTACGACAAAGTGAATGGTGG
CGCAGTATTAGGGGAGACGACATTGAGCAGGAGAATATGTGGTTAGGATA
GATGCCACCTCAAACCCGAGCGATTCAACATAGCGAAAGTGTGGGGGAGA
AAAAGCGGAAACCTCTGCGCCGTGACCCGGAGAAGAGGCGGCAACAGAAC
ATTCAAGCCCAACGCAGATACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007623 | circadian rhythm |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_1690-T1 | ATCC64974_1690-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000011.2 |
| Note | antiSMASH:Cluster_10000011.1 |
| DBxref | InterPro:IPR020844 |
| DBxref | InterPro:IPR004827 |
| DBxref | InterPro:IPR021833 |
| DBxref | PFAM:PF11905 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000001.1 | supercontig | OGUI01000001.1:530454..531767 - |
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