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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1731278..1732706+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_16910-T1 ID=ATCC64974_16910-T1|Name=ATCC64974_16910-T1|organism=Aspergillus niger N402|type=mRNA|length=1429bp|location=Sequence derived from alignment at OGUI01000003.1:1731278..1732706+ (Aspergillus niger N402)
ATGTCTGATCGCGCCTCCTCGGCATCATTTCGAGCAGGACCTCCATCACC
ATCATCTCCCGCCGCAGGGACTCTCAAGCAAAACCAGTTACCAGCTCCCT
TATCCGATCGAATTCCACAGACTCCGACATCACCTCCGTTGATGTCGGTA
AGCGCTCAGAACTATGCCACCAACTTTGTATCCTCGCAAGCATCACCTAA
CCAGGCGACCTCTCAATCCGCAACCCTCTCATCACCCCCGTCCTCTGCTC
CGATGTCCACCCAAGCCTCGCAACAACCGACGGTAGGTACGGCGAATTCG
TTTCCGACGCCGGCCAGCAGCGTGAGCGGGCACTTCCCGGGTGCGACTTC
CTTCGATGATCCTGAAAATACAGATAAGCCAATGGGCTCGACAGTTCCAG
ACACAGGTGCGCAAACAGCGAACATGAATGCCGCGGCCATACAGCAGGCA
GAACACAGACGGACAGATCATGACCGGCATACAGAAGGTATAAAAATGGA
AGTTGGAGTCCGCGATTTTGCTGTGAACCACGGAGGCGACGCTATGGATA
TCGATAGTGAGGCGCCGGCTTCATCCAGTCGCAGTGAGCCAAGCTTGGAA
TCCTTGCAGAAGAACTTTTCGTCTGCCTTTCATGTTTGCAAAAGCTGTAA
GAGCTCCCCAGTCCTTGGCATGGCTGTTGCCACAATTTGCAATGCACTCT
CTCCCATCTTATATTTGGATTGAGCTTTGTTAACACACGTGGCTTTATGA
AAATGCAGCCCATATTGCGACTGGACCGGATCCATCGCTAGATCTCATCT
CACTGTACGGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGGATCCT
GTGACAGGCGAGAAGATCAACAGGCTCAGGAAATCCTATGAAGGAAAGCT
GAAGGGCTTGGGACTCGCAGGCAGGAACAAGCCAGTGAAGACCGAGCCTG
GTGCGCCCGGAAGCCTCAGGCACATGACCATGTGGCCAGAGGAAGAATGG
CAAAACCAAAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGACATGGACTC
TGCGCTGCACAGCTTGCAGATGAGGGCCATGAAGATGGAGCCGGGCACGG
TACCGAACAATGAGTATTGGGAAGACGTGCTGGGGCACGAGAAGCCATCT
AAGCACGCCGGTGGCGACGCCAGCAAAAAGGGCGTCGCACCCCCTCCCAA
CGGAGTCCGGATTCCCCAACCGAATGGAACCCCAGCGCCTGTTTCAGACC
AAGAGCGATCCCGACCCAGCAGGGGACGTAAACGGCATTACGACGACAAC
AGTTTTGTTGGTTACGGCGAAGGTTACGCAGACGATGATGACGATGGGGC
ATTTTATTCAAACAGTGAAGGCATGGGGAAGAAAAAACGGAAGAAGGTAG
GGCGTTCGGACGGTGAAATGGCATTCTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1731278..1732706+ >ATCC64974_16910-T1 ID=ATCC64974_16910-T1|Name=ATCC64974_16910-T1|organism=Aspergillus niger N402|type=CDS|length=2634bp|location=Sequence derived from alignment at OGUI01000003.1:1731278..1732706+ (Aspergillus niger N402)
ATGTCTGATCGCGCCTCCTCGGCATCATTTCGAGCAGGACCTCCATCACC
ATCATCTCCCGCCGCAGGGACTCTCAAGCAAAACCAGTTACCAGCTCCCT
TATCCGATCGAATTCCACAGACTCCGACATCACCTCCGTTGATGTCGGTA
AGCGCTCAGAACTATGCCACCAACTTTGTATCCTCGCAAGCATCACCTAA
CCAGGCGACCTCTCAATCCGCAACCCTCTCATCACCCCCGTCCTCTGCTC
CGATGTCCACCCAAGCCTCGCAACAACCGACGGTAGGTACGGCGAATTCG
TTTCCGACGCCGGCCAGCAGCGTGAGCGGGCACTTCCCGGGTGCGACTTC
CTTCGATGATCCTGAAAATACAGATAAGCCAATGGGCTCGACAGTTCCAG
ACACAGGTGCGCAAACAGCGAACATGAATGCCGCGGCCATACAGCAGGCA
GAACACAGACGGACAGATCATGACCGGCATACAGAAGGTATAAAAATGGA
AGTTGGAGTCCGCGATTTTGCTGTGAACCACGGAGGCGACGCTATGGATA
TCGATAGTGAGGCGCCGGCTTCATCCAGTCGCAGTGAGCCAAGCTTGGAA
TCCTTGCAGAAGAACTTTTCGTCTGCCTTTCATGTTTGCAAAAGCTCCCA
TATTGCGACTGGACCGGATCCATCGCTAGATCTCATCTCACTGTACGGAT
TAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGGATCCTGTGACAGGCGAG
AAGATCAACAGGCTCAGGAAATCCTATGAAGGAAAGCTGAAGGGCTTGGG
ACTCGCAGGCAGGAACAAGCCAGTGAAGACCGAGCCTGGTGCGCCCGGAA
GCCTCAGGCACATGACCATGTGGCCAGAGGAAGAATGGCAAAACCAAAAA
GTGTTCGGGAAGGAGATCAAGGTAGCGGACATGGACTCTGCGCTGCACAG
CTTGCAGATGAGGGCCATGAAGATGGAGCCGGGCACGGTACCGAACAATG
AGTATTGGGAAGACGTGCTGGGGCACGAGAAGCCATCTAAGCACGCCGGT
GGCGACGCCAGCAAAAAGGGCGTCGCACCCCCTCCCAACGGAGTCCGGAT
TCCCCAACCGAATGGAACCCCAGCGCCTGTTTCAGACCAAGAGCGATCCC
GACCCAGCAGGGGACGTAAACGGCATTACGACGACAACAGTTTTGTTGGT
TACGGCGAAGGTTACGCAGACGATGATGACGATGGGGCATTTTATTCAAA
CAGTGAAGGCATGGGGAAGAAAAAACGGAAGAAGGTAGGGCGTTCGGACG
GTGAAATGGCATTCTAAATGTCTGATCGCGCCTCCTCGGCATCATTTCGA
GCAGGACCTCCATCACCATCATCTCCCGCCGCAGGGACTCTCAAGCAAAA
CCAGTTACCAGCTCCCTTATCCGATCGAATTCCACAGACTCCGACATCAC
CTCCGTTGATGTCGGTAAGCGCTCAGAACTATGCCACCAACTTTGTATCC
TCGCAAGCATCACCTAACCAGGCGACCTCTCAATCCGCAACCCTCTCATC
ACCCCCGTCCTCTGCTCCGATGTCCACCCAAGCCTCGCAACAACCGACGG
TAGGTACGGCGAATTCGTTTCCGACGCCGGCCAGCAGCGTGAGCGGGCAC
TTCCCGGGTGCGACTTCCTTCGATGATCCTGAAAATACAGATAAGCCAAT
GGGCTCGACAGTTCCAGACACAGGTGCGCAAACAGCGAACATGAATGCCG
CGGCCATACAGCAGGCAGAACACAGACGGACAGATCATGACCGGCATACA
GAAGGTATAAAAATGGAAGTTGGAGTCCGCGATTTTGCTGTGAACCACGG
AGGCGACGCTATGGATATCGATAGTGAGGCGCCGGCTTCATCCAGTCGCA
GTGAGCCAAGCTTGGAATCCTTGCAGAAGAACTTTTCGTCTGCCTTTCAT
GTTTGCAAAAGCTCCCATATTGCGACTGGACCGGATCCATCGCTAGATCT
CATCTCACTGTACGGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGG
ATCCTGTGACAGGCGAGAAGATCAACAGGCTCAGGAAATCCTATGAAGGA
AAGCTGAAGGGCTTGGGACTCGCAGGCAGGAACAAGCCAGTGAAGACCGA
GCCTGGTGCGCCCGGAAGCCTCAGGCACATGACCATGTGGCCAGAGGAAG
AATGGCAAAACCAAAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGACATG
GACTCTGCGCTGCACAGCTTGCAGATGAGGGCCATGAAGATGGAGCCGGG
CACGGTACCGAACAATGAGTATTGGGAAGACGTGCTGGGGCACGAGAAGC
CATCTAAGCACGCCGGTGGCGACGCCAGCAAAAAGGGCGTCGCACCCCCT
CCCAACGGAGTCCGGATTCCCCAACCGAATGGAACCCCAGCGCCTGTTTC
AGACCAAGAGCGATCCCGACCCAGCAGGGGACGTAAACGGCATTACGACG
ACAACAGTTTTGTTGGTTACGGCGAAGGTTACGCAGACGATGATGACGAT
GGGGCATTTTATTCAAACAGTGAAGGCATGGGGAAGAAAAAACGGAAGAA
GGTAGGGCGTTCGGACGGTGAAATGGCATTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_16910-T1 | ATCC64974_16910-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013942 |
| DBxref | PFAM:PF08633 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1731278..1732706 + |
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