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ATCC64974_17070-T1, ATCC64974_17070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17070-T1
Unique NameATCC64974_17070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1783901..1784711-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17070-T1 ID=ATCC64974_17070-T1|Name=ATCC64974_17070-T1|organism=Aspergillus niger N402|type=mRNA|length=811bp|location=Sequence derived from alignment at OGUI01000003.1:1783901..1784711- (Aspergillus niger N402)
ATGTACGGCGAACACGGAAACAAGCTCGTATGTGCTTTTCTAATGAGCCA
TGCTTTATGAATAACCCGTCCTGACGAAACCCACAAACAGGTTCAACATG
CCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTG
GTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACA
CCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCG
TTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGA
TGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATG
CTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAG
GGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGC
ACTGCGAGTGGGAACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTT
CCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATA
TTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTG
AGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGGGTATGTGAG
GCATTTTCTATATTTTCCCTCGCGCGTATTGTTGATCGGCAGGTTGGAAT
GCTGACATTGCATATAGGGTGATCAATTTGACGAAAAACAGTCAACTCTA
CGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCTAGAGC
GTCTGAGTTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1783901..1784711-

>ATCC64974_17070-T1 ID=ATCC64974_17070-T1|Name=ATCC64974_17070-T1|organism=Aspergillus niger N402|type=CDS|length=2016bp|location=Sequence derived from alignment at OGUI01000003.1:1783901..1784711- (Aspergillus niger N402)
GGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAGGGGATG
TGGAACGATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGAGTTCAA
CATGCCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAAACCGA
ATTGGTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGATGTCG
CACACCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAGAACCA
GCCGTTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGCAACAA
ACGATGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGC
TATGCTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGGCAGAC
GAAGGGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCAGCGAT
GGGCACTGCGAGTGGGAACCACAGTTCGTTGAGTCCGGAAGAAGAAGAAT
ACTTCCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGTGGACA
GATATTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGA
CGTGAGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGGATGTA
CGGCGAACACGGAAACAAGCTCGGTGATCAATTTGACGAAAAACAGTCAA
CTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCT
AGAGCGTCTGAGTTGAGTTCAACATGCCAAGCGCACTCAAGCTCTCACCC
ATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAGCCCGCGAAGTA
CGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCATTCGAAGGCAG
TTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCTCTTAGTGGATC
ATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCTACCACCGTGTC
CGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTTGATTTGCTCGA
ACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGCATCAGGCCAGG
GGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGAACCACAGTTCG
TTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGCGATCTTCTGGC
GGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGGAAGCCTGGAGC
CCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGGATGCGGGGGAG
ATTCAGACTGAGTATGGATGTACGGCGAACACGGAAACAAGCTCGGTGAT
CAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAGGGGATGTGGAAC
GATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGAGTTCAACATGCC
AAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGT
CCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACC
TCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTT
GCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATG
TCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCT
GGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGG
GCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCAC
TGCGAGTGGGAACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCC
GACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATT
GATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAG
AGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGGATGTACGGCGA
ACACGGAAACAAGCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000811GINS complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF1ATCC64974_17070Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17070-T1ATCC64974_17070-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17070-T1.cdsATCC64974_17070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17070-T1.exon3ATCC64974_17070-T1.exon3Aspergillus niger N402exon
ATCC64974_17070-T1.exon2ATCC64974_17070-T1.exon2Aspergillus niger N402exon
ATCC64974_17070-T1.exon1ATCC64974_17070-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092648K5
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR005339
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
ProductDNA replication protein psf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1783901..1784711 -
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