You are here

Home

ATCC64974_17180-T1, ATCC64974_17180-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17180-T1
Unique NameATCC64974_17180-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1825390..1825870+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17180-T1 ID=ATCC64974_17180-T1|Name=ATCC64974_17180-T1|organism=Aspergillus niger N402|type=mRNA|length=481bp|location=Sequence derived from alignment at OGUI01000003.1:1825390..1825870+ (Aspergillus niger N402)
ATGCAGTTCCTCCTTCTCCTCGCTGCAACTTTGAGTCTCGGTGCAGGAAC
TCTGGCTTCCCCTGCACCGGTTCCTAATAGCCTTGATTCGCGGGCTTATC
ATTGGCATGGCTGTGGCGCCGGCATTGAGGTATGTCTTTGACGTTTGCTC
TACTGTATATGGGAAGCCAGATGTGAGTTGTTACTGACTCGGCCTGAAGT
GCCATACTGCCAGTGACTGTTACGCGTCCCAGGATTGCTTGAAGCTTGCT
CTTGGTGTAAGTGTATTGTGTCAGTCTAGATTGTTACTAAGAAATCTGAC
CTGGTATATGCAGAGCACCGACAATATCCACTGTGGTCAAGATAGTTACC
CCACAGCTTGCTGGGCGGTAAGTTAGATTTTCTTGGTCGCTTTCTTGTTA
TTCATCTTCTGTTCTCTTAGTGTGGAGGTCGAGTGTAAGAAGCATTGTTC
TGACGTGTATTTGTAGGATTGGACCGACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:1825390..1825870+

>ATCC64974_17180-T1 ID=ATCC64974_17180-T1|Name=ATCC64974_17180-T1|organism=Aspergillus niger N402|type=CDS|length=1020bp|location=Sequence derived from alignment at OGUI01000003.1:1825390..1825870+ (Aspergillus niger N402)
ATGCAGTTCCTCCTTCTCCTCGCTGCAACTTTGAGTCTCGGTGCAGGAAC
TCTGGCTTCCCCTGCACCGGTTCCTAATAGCCTTGATTCGCGGGCTTATC
ATTGGCATGGCTGTGGCGCCGGCATTGAGTGCCATACTGCCAGTGACTGT
TACGCGTCCCAGGATTGCTTGAAGCTTGCTCTTGGTAGCACCGACAATAT
CCACTGTGGTCAAGATAGTTACCCCACAGCTTGCTGGGCGGATTGGACCG
ACTAGATGCAGTTCCTCCTTCTCCTCGCTGCAACTTTGAGTCTCGGTGCA
GGAACTCTGGCTTCCCCTGCACCGGTTCCTAATAGCCTTGATTCGCGGGC
TTATCATTGGCATGGCTGTGGCGCCGGCATTGAGTGCCATACTGCCAGTG
ACTGTTACGCGTCCCAGGATTGCTTGAAGCTTGCTCTTGGTAGCACCGAC
AATATCCACTGTGGTCAAGATAGTTACCCCACAGCTTGCTGGGCGGATTG
GACCGACTAGATGCAGTTCCTCCTTCTCCTCGCTGCAACTTTGAGTCTCG
GTGCAGGAACTCTGGCTTCCCCTGCACCGGTTCCTAATAGCCTTGATTCG
CGGGCTTATCATTGGCATGGCTGTGGCGCCGGCATTGAGTGCCATACTGC
CAGTGACTGTTACGCGTCCCAGGATTGCTTGAAGCTTGCTCTTGGTAGCA
CCGACAATATCCACTGTGGTCAAGATAGTTACCCCACAGCTTGCTGGGCG
GATTGGACCGACTAGATGCAGTTCCTCCTTCTCCTCGCTGCAACTTTGAG
TCTCGGTGCAGGAACTCTGGCTTCCCCTGCACCGGTTCCTAATAGCCTTG
ATTCGCGGGCTTATCATTGGCATGGCTGTGGCGCCGGCATTGAGTGCCAT
ACTGCCAGTGACTGTTACGCGTCCCAGGATTGCTTGAAGCTTGCTCTTGG
TAGCACCGACAATATCCACTGTGGTCAAGATAGTTACCCCACAGCTTGCT
GGGCGGATTGGACCGACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_17180ATCC64974_17180Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17180-T1.exon1ATCC64974_17180-T1.exon1Aspergillus niger N402exon
ATCC64974_17180-T1.exon2ATCC64974_17180-T1.exon2Aspergillus niger N402exon
ATCC64974_17180-T1.exon3ATCC64974_17180-T1.exon3Aspergillus niger N402exon
ATCC64974_17180-T1.exon4ATCC64974_17180-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17180-T1.cdsATCC64974_17180-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17180-T1ATCC64974_17180-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1825390..1825870 +
Powered by Drupal