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ATCC64974_17250-T1, ATCC64974_17250-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17250-T1
Unique NameATCC64974_17250-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1842715..1843480-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17250-T1 ID=ATCC64974_17250-T1|Name=ATCC64974_17250-T1|organism=Aspergillus niger N402|type=mRNA|length=766bp|location=Sequence derived from alignment at OGUI01000003.1:1842715..1843480- (Aspergillus niger N402)
ATGACAAGCGCAACAGCATCAACAACAACAACCCCACCCTTCCAATTCCC
CCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGA
CACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGC
CGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTCCCC
ATTATTCCATAACACGACGCTCCGAAAGCGCATATCGATGAGCGATGCGC
GGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGG
AAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTG
GTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTATGTA
TTCTTATATTCCGGATCATCATTCGAGATGTTGGAGGGGAGTTGGGGGTA
GAGTTGGGATTGAGGGGAGATAGTTGCTAATTGCTTATTTTTGCTGTATA
GGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGT
TGGAGGGGGAGGCCACGATGTCGCAAGGTAGGTTAAGTGGATTTGCTCCT
AATCATTGGGTGATGCTGGTATGGTATGGTGGCTAATGGTTTGGCTGGAA
TAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTT
CTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGG
TGTCAAGTTCTTCTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:1842715..1843480-

>ATCC64974_17250-T1 ID=ATCC64974_17250-T1|Name=ATCC64974_17250-T1|organism=Aspergillus niger N402|type=CDS|length=1746bp|location=Sequence derived from alignment at OGUI01000003.1:1842715..1843480- (Aspergillus niger N402)
AATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCTC
GTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGT
CAAGTTCTTCTAGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGG
TTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGATGACAAGCGC
AACAGCATCAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCTACT
CATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACCTCC
CAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCACCG
CGTCTACCGACTATCGTTAATCGAAGCCATCGAGTCCCCATTATTCCATA
ACACGACGCTCCGAAAGCGCATATCGATGAGCGATGCGCGGGATATTCTA
GACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGAAGAGAGCGGA
GTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGC
CTGAGGAGTGGGCAGGGTTGATTGCGGATTGGAATGGCATGGGATGGACC
CCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCG
CAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAGGTGGA
AAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGG
GGGAGGCCACGATGTCGCAAGATGACAAGCGCAACAGCATCAACAACAAC
AACCCCACCCTTCCAATTCCCCCTCACCTACTCATTTCCAGCCTTCTTCA
CCCCCCAACCCAACAGCACGACACGCACCTCCCAACTCCAAAAATGGTCT
TCCCTGATCCAATCCTGGTGCCGACACCACCGCGTCTACCGACTATCGTT
AATCGAAGCCATCGAGTCCCCATTATTCCATAACACGACGCTCCGAAAGC
GCATATCGATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAAGT
GAAGAGGAGGGCGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGGAG
TAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGT
TGATTGCGGATTGGAATGGCATGGGATGGACCCCGATGTGATGCACAAGT
CCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAA
GGCCAGGAGGGTGTCAAGTTCTTCTAGGTGGAAAACACTGGCCAGAAGAA
CGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGC
AAGATGACAAGCGCAACAGCATCAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
CCCATTATTCCATAACACGACGCTCCGAAAGCGCATATCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_17250ATCC64974_17250Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17250-T1ATCC64974_17250-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17250-T1.cdsATCC64974_17250-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17250-T1.exon3ATCC64974_17250-T1.exon3Aspergillus niger N402exon
ATCC64974_17250-T1.exon2ATCC64974_17250-T1.exon2Aspergillus niger N402exon
ATCC64974_17250-T1.exon1ATCC64974_17250-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR014041
DBxrefInterPro:IPR008570
DBxrefPFAM:PF05871
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1842715..1843480 -
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