|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1854485..1857638- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_17300-T1 ID=ATCC64974_17300-T1|Name=ATCC64974_17300-T1|organism=Aspergillus niger N402|type=mRNA|length=3154bp|location=Sequence derived from alignment at OGUI01000003.1:1854485..1857638- (Aspergillus niger N402)
ATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGCAAATGT
CACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTCAAAAGA
TCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCTAAGCTC
TGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAACAGTGA
GACAAGCGGATCAAGATTTTGCTTCGCTTGATGGCTAATGCGACACAGTC
ACGCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCCCG
CGGGCACTACCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGATA
TTTTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCGTC
CTCGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTCTC
TCTGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTTTC
GACTGGAAACGCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACAGG
AATGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTCAA
GACCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGTCA
TCACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGGGAGTAACA
GCATTGTCACTGTCAGACTATGTGTCCGGCCTAGAGGACTCAGACAGGCT
ACTTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAAGGCGCAC
GCGGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTTATGACA
GGCATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCGTA
CAACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTTGACAAGCCCTTGC
TCATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTGTT
GTTATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAGAT
CGTCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGATA
CCGAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGGTC
AGGAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCCAA
GGTGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGTCG
ATGCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGACC
GTCTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGTAC
TAGACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGACG
CCTGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCACTA
GGAGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAGTA
TGACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCCCG
CTGAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCTGG
AAGGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCGCC
AGGCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAACG
GCAACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCAAG
CCGAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTCTA
CCTAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGACC
TTTGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGTGG
GAGATGACACCCAACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCCGT
CATCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCATCG
ACGATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGCTC
CGCTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTGAA
CCTCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGGCG
ACCCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCCTC
GTTGAGGAATTCATGCTTCACGCCAACATCACCGTTGCTTCCAAGATCTA
CAGCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCCTC
CGCAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACATG
AGACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGTTG
TGTCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGCCA
CCCGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAGAG
TCCGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTCAC
CTCCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGCGT
CAGCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAGTG
ATGACCCGAAACAGACTCGAAGATATCTGCCGAAACATCAACTATCGTCA
TCGCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGGAC
AGGCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACGGC
GGCATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTTGT
TGTTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGATT
TCGTCCTTCCAGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGGAG
CTGGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTCCG
CGTTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGAGCGTGGAAC
TGTTCCAGAAGGTCAACGTCAACGTTAGCTCCGTGAAAGAAGAAGGTGGT
CGCGGTGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGATGC
CTAG back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1854485..1857638- >ATCC64974_17300-T1 ID=ATCC64974_17300-T1|Name=ATCC64974_17300-T1|organism=Aspergillus niger N402|type=CDS|length=6204bp|location=Sequence derived from alignment at OGUI01000003.1:1854485..1857638- (Aspergillus niger N402)
TCACGCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCC
CGCGGGCACTACCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGA
TATTTTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCG
TCCTCGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTC
TCTCTGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTT
TCGACTGGAAACGCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACA
GGAATGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTC
AAGACCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGT
CATCACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGGGAGTAA
CAGCATTGTCACTGTCAGACTATGTGTCCGGCCTAGAGGACTCAGACAGG
CTACTTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAAGGCGC
ACGCGGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTTATGA
CAGGCATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCG
TACAACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTTGACAAGCCCTT
GCTCATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTG
TTGTTATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAG
ATCGTCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGA
TACCGAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGG
TCAGGAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCC
AAGGTGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGT
CGATGCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGA
CCGTCTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGT
ACTAGACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGA
CGCCTGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCAC
TAGGAGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAG
TATGACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCC
CGCTGAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCT
GGAAGGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCG
CCAGGCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAA
CGGCAACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCA
AGCCGAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTC
TACCTAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGA
CCTTTGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGT
GGGAGATGACACCCAACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCC
GTCATCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCAT
CGACGATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGC
TCCGCTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTG
AACCTCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGG
CGACCCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCC
TCGTTGAGGAATTCATGCTTCACGCCAACATCACCGTTGCTTCCAAGATC
TACAGCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCC
TCCGCAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACA
TGAGACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGT
TGTGTCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGC
CACCCGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAG
AGTCCGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTC
ACCTCCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGC
GTCAGCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAG
TGATGACCCGAAACAGACTCGAAGATATCTGCCGAAACATCAACTATCGT
CATCGCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGG
ACAGGCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACG
GCGGCATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTT
GTTGTTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGA
TTTCGTCCTTCCAGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGG
AGCTGGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTC
CGCGTTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGAGCGTGGA
ACTGTTCCAGAAGGTCAACGTCAACGTTAGCTCCGTGAAAGAAGAAGGTG
GTCGCGGTGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGAT
GCCTAGATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGC
AAATGTCACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTC
AAAAGATCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCT
AAGCTCTGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAA
CATCACGCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCC
CCCGCGGGCACTACCTTGTCCCCGATACGAATGCATTGCTGAATGGCATG
GATATTTTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAAC
CGTCCTCGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGC
TCTCTCTGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAG
TTTCGACTGGAAACGCATGTCCGGAGAGGACCCGATGAGTCGATAAATGA
CAGGAATGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATC
TCAAGACCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTT
GTCATCACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGGGAGT
AACAGCATTGTCACTGTCAGACTATGTGTCCGGCCTAGAGGACTCAGACA
GGCTACTTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAAGGC
GCACGCGGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTTAT
GACAGGCATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGC
CGTACAACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTTGACAAGCCC
TTGCTCATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGT
TGTTGTTATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCA
AGATCGTCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGAT
GATACCGAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGA
GGTCAGGAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAG
CCAAGGTGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACAT
GTCGATGCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCA
GACCGTCTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCC
GTACTAGACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATC
GACGCCTGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTC
ACTAGGAGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTG
AGTATGACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTT
CCCGCTGAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGG
CTGGAAGGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACC
CGCCAGGCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCG
AACGGCAACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGT
CAAGCCGAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAG
TCTACCTAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACA
GACCTTTGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTT
GTGGGAGATGACACCCAACGCAGAAGTCGTTTCCGCAGATTTCACCAAAT
CCGTCATCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGC
ATCGACGATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCT
GCTCCGCTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGC
TGAACCTCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTC
GGCGACCCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAG
CCTCGTTGAGGAATTCATGCTTCACGCCAACATCACCGTTGCTTCCAAGA
TCTACAGCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCT
CCTCCGCAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGA
CATGAGACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACC
GTTGTGTCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTC
GCCACCCGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGC
AGAGTCCGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACT
TCACCTCCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTC
GCGTCAGCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGG
AGTGATGACCCGAAACAGACTCGAAGATATCTGCCGAAACATCAACTATC
GTCATCGCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTT
GGACAGGCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGA
CGGCGGCATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCG
TTGTTGTTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAG
GATTTCGTCCTTCCAGATGACGCTGCTCTCCGCACCGTCGACGAGCGACG
GGAGCTGGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTC
TCCGCGTTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGAGCGTG
GAACTGTTCCAGAAGGTCAACGTCAACGTTAGCTCCGTGAAAGAAGAAGG
TGGTCGCGGTGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCG
ATGCCTAGATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCA
GCAAATGTCACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGT
TCAAAAGATCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGT
CTAAGCTCTGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGA
AACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004540 | ribonuclease activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_17300-T1 | ATCC64974_17300-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260AQB |
| DBxref | InterPro:IPR029060 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR022966 |
| DBxref | InterPro:IPR033771 |
| DBxref | InterPro:IPR041505 |
| DBxref | InterPro:IPR033770 |
| DBxref | InterPro:IPR001900 |
| DBxref | InterPro:IPR002716 |
| DBxref | PFAM:PF17215 |
| DBxref | PFAM:PF17216 |
| DBxref | PFAM:PF00773 |
| DBxref | PFAM:PF13638 |
| DBxref | PFAM:PF17849 |
| DBxref | PFAM:PF17876 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1854485..1857638 - |
|
