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ATCC64974_17370-T1, ATCC64974_17370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17370-T1
Unique NameATCC64974_17370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1873878..1875174-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17370-T1 ID=ATCC64974_17370-T1|Name=ATCC64974_17370-T1|organism=Aspergillus niger N402|type=mRNA|length=1297bp|location=Sequence derived from alignment at OGUI01000003.1:1873878..1875174- (Aspergillus niger N402)
ATGCTTCAAACTCGGTTGGCCCTGACGGGCCTTCGTCTTCCGTTTAGAAC
CTTGTCCTCGGCCGTTTCGTCCCGGGCCTATTCGACTGTCGTCCGCGAGC
AAGAGAATCCGTCCGCTGACGAGCCTGCAAGTTCGACGTTTGACCCCAGT
ATCGCCTTCGCCCCTCCACCCACTCGTGATGACGCCGGTATCCTTCTACG
TTCCTATACTCCACGAACCCCCGGTATCAGACATTTGCGCCGACCGATCA
ATGACCACCTGTGGAAAGGACGCCCGGTGCAGAAGCTGACGTTCCCCAAA
CGAGGTCAAGCCAAGGGTGGTCGTAACAACTCTGGTAGAGTGACTGTCCG
GCATCGTGGTGGTGGCCACAAGCGCCGTATACGAATGGTTGATTTTGCGC
GTGACGCTCCCGGTCCGCACGTGGTGGAACGTATCGAACATGACCCTGGT
CGGAGTGCTCACATTGCTCTTGTCCGTAGCCAGGAGACCAAGAAACTGAG
TTATATCCTGGCTGCGGAGGGTATGCGGGCTGGTGACGTTGTCCACAGTT
ACATGTCTGGTATTCCAGAGGAACTCTGGAAGAGCATGGGAGGTACTGTG
GACCCTGGTGTTCTCGCTGCCAGAACCGCATGGAGAGGAAACTGCTTGCC
GCTGCACATGATGCCTGTCGGTACTCTGGTCTTCAACGTCGGTTTACGTC
CTGGTCAGGGAGGCCAGCTCTGCCGTAGTGCTGGCACTTTTGCGACAGTC
ATTGCCAAGGGTATCGATATCAAGGCGAAGCGTGATCATTCTGACGGCCA
AGAAGGAGAAGCCGGAGCCGTTGAGCAGAAGCCTCTCACGCAACGCGAGA
GGCAAAGAAAGGAGCGCATCTCTCAACATGTTACCATCCGTCTTCAGAGT
GGTGAAGTTCGTCTGATTCATAAGGACTGCTGCGCGACTGTTGGCGTCGC
TAGCAACCCTAACCACCAGTACCGCCAGCTTGGTAAGGCTGGTCGCTCTC
GTTGGCTCAACATTCGGCCTACCGTTCGTGGTCTTGCCATGAACGCCGCC
GAACATCCTCACGGTGGTGGTCGAGGCAAGTCGAAGGGTAACGTTGACCC
GAAGAGTCCTTGGGGTATGCCGGTATGTATCCTCGCCTCGCTATTCCTTC
CTTTGCTTCCAGGCATCATCCATGCTAATGTCTTCGTTTTTACAGGCGAA
ATCCGGTTACAAGACTCGTCCCAAGTGGAAGATCAACAAGGCTGTGGTTC
ATCCCAGAGAGCGCAACCAAGGCAAGCGTCGTCGTGGATACCACTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:1873878..1875174-

>ATCC64974_17370-T1 ID=ATCC64974_17370-T1|Name=ATCC64974_17370-T1|organism=Aspergillus niger N402|type=CDS|length=2448bp|location=Sequence derived from alignment at OGUI01000003.1:1873878..1875174- (Aspergillus niger N402)
GCGAAATCCGGTTACAAGACTCGTCCCAAGTGGAAGATCAACAAGGCTGT
GGTTCATCCCAGAGAGCGCAACCAAGGCAAGCGTCGTCGTGGATACCACT
AGATGCTTCAAACTCGGTTGGCCCTGACGGGCCTTCGTCTTCCGTTTAGA
ACCTTGTCCTCGGCCGTTTCGTCCCGGGCCTATTCGACTGTCGTCCGCGA
GCAAGAGAATCCGTCCGCTGACGAGCCTGCAAGTTCGACGTTTGACCCCA
GTATCGCCTTCGCCCCTCCACCCACTCGTGATGACGCCGGTATCCTTCTA
CGTTCCTATACTCCACGAACCCCCGGTATCAGACATTTGCGCCGACCGAT
CAATGACCACCTGTGGAAAGGACGCCCGGTGCAGAAGCTGACGTTCCCCA
AACGAGGTCAAGCCAAGGGTGGTCGTAACAACTCTGGTAGAGTGACTGTC
CGGCATCGTGGTGGTGGCCACAAGCGCCGTATACGAATGGTTGATTTTGC
GCGTGACGCTCCCGGTCCGCACGTGGTGGAACGTATCGAACATGACCCTG
GTCGGAGTGCTCACATTGCTCTTGTCCGTAGCCAGGAGACCAAGAAACTG
AGTTATATCCTGGCTGCGGAGGGTATGCGGGCTGGTGACGTTGTCCACAG
TTACATGTCTGGTATTCCAGAGGAACTCTGGAAGAGCATGGGAGGTACTG
TGGACCCTGGTGTTCTCGCTGCCAGAACCGCATGGAGAGGAAACTGCTTG
CCGCTGCACATGATGCCTGTCGGTACTCTGGTCTTCAACGTCGGTTTACG
TCCTGGTCAGGGAGGCCAGCTCTGCCGTAGTGCTGGCACTTTTGCGACAG
TCATTGCCAAGGGTATCGATATCAAGGCGAAGCGTGATCATTCTGACGGC
CAAGAAGGAGAAGCCGGAGCCGTTGAGCAGAAGCCTCTCACGCAACGCGA
GAGGCAAAGAAAGGAGCGCATCTCTCAACATGTTACCATCCGTCTTCAGA
GTGGTGAAGTTCGTCTGATTCATAAGGACTGCTGCGCGACTGTTGGCGTC
GCTAGCAACCCTAACCACCAGTACCGCCAGCTTGGTAAGGCTGGTCGCTC
TCGTTGGCTCAACATTCGGCCTACCGTTCGTGGTCTTGCCATGAACGCCG
CCGAACATCCTCACGGTGGTGGTCGAGGCAAGTCGAAGGGTAACGTTGAC
CCGAAGAGTCCTTGGGGTATGCCGGCGAAATCCGGTTACAAGACTCGTCC
CAAGTGGAAGATCAACAAGGCTGTGGTTCATCCCAGAGAGCGCAACCAAG
GCAAGCGTCGTCGTGGATACCACTAGATGCTTCAAACTCGGTTGGCCCTG
ACGGGCCTTCGTCTTCCGTTTAGAACCTTGTCCTCGGCCGTTTCGTCCCG
GGCCTATTCGACTGTCGTCCGCGAGCAAGAGAATCCGTCCGCTGACGAGC
CTGCAAGTTCGACGTTTGACCCCAGTATCGCCTTCGCCCCTCCACCCACT
CGTGATGACGCCGGTATCCTTCTACGTTCCTATACTCCACGAACCCCCGG
TATCAGACATTTGCGCCGACCGATCAATGACCACCTGTGGAAAGGACGCC
CGGTGCAGAAGCTGACGTTCCCCAAACGAGGTCAAGCCAAGGGTGGTCGT
AACAACTCTGGTAGAGTGACTGTCCGGCATCGTGGTGGTGGCCACAAGCG
CCGTATACGAATGGTTGATTTTGCGCGTGACGCTCCCGGTCCGCACGTGG
TGGAACGTATCGAACATGACCCTGGTCGGAGTGCTCACATTGCTCTTGTC
CGTAGCCAGGAGACCAAGAAACTGAGTTATATCCTGGCTGCGGAGGGTAT
GCGGGCTGGTGACGTTGTCCACAGTTACATGTCTGGTATTCCAGAGGAAC
TCTGGAAGAGCATGGGAGGTACTGTGGACCCTGGTGTTCTCGCTGCCAGA
ACCGCATGGAGAGGAAACTGCTTGCCGCTGCACATGATGCCTGTCGGTAC
TCTGGTCTTCAACGTCGGTTTACGTCCTGGTCAGGGAGGCCAGCTCTGCC
GTAGTGCTGGCACTTTTGCGACAGTCATTGCCAAGGGTATCGATATCAAG
GCGAAGCGTGATCATTCTGACGGCCAAGAAGGAGAAGCCGGAGCCGTTGA
GCAGAAGCCTCTCACGCAACGCGAGAGGCAAAGAAAGGAGCGCATCTCTC
AACATGTTACCATCCGTCTTCAGAGTGGTGAAGTTCGTCTGATTCATAAG
GACTGCTGCGCGACTGTTGGCGTCGCTAGCAACCCTAACCACCAGTACCG
CCAGCTTGGTAAGGCTGGTCGCTCTCGTTGGCTCAACATTCGGCCTACCG
TTCGTGGTCTTGCCATGAACGCCGCCGAACATCCTCACGGTGGTGGTCGA
GGCAAGTCGAAGGGTAACGTTGACCCGAAGAGTCCTTGGGGTATGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_17370ATCC64974_17370Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17370-T1ATCC64974_17370-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17370-T1.cdsATCC64974_17370-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17370-T1.exon2ATCC64974_17370-T1.exon2Aspergillus niger N402exon
ATCC64974_17370-T1.exon1ATCC64974_17370-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09262X31
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR014726
DBxrefInterPro:IPR022666
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR002171
DBxrefInterPro:IPR022669
DBxrefPFAM:PF03947
DBxrefPFAM:PF00181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1873878..1875174 -
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