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ATCC64974_17440-T1, ATCC64974_17440-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17440-T1
Unique NameATCC64974_17440-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1889881..1890558-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17440-T1 ID=ATCC64974_17440-T1|Name=ATCC64974_17440-T1|organism=Aspergillus niger N402|type=mRNA|length=678bp|location=Sequence derived from alignment at OGUI01000003.1:1889881..1890558- (Aspergillus niger N402)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGGTAAGTGCTATTCTACTTATAGTCATA
GGAGACTCATTTCGTTGACATATTCCTATCGCTGTAACTTAGAGTCATGC
TCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGG
AACTATTCTTGGCCCCCCTCACGTTCGTCCCACGCTTCCGACTCGCATCC
ATTATACTATACAATAGCATCACTGACATTATGAACGAGCGCAGAGTGTC
CATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCC
CGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCG
TTGATGGCCGGAGCGGAAAGGTAAGGATTCGTTCTATTTCGACTGCTACT
ATATGGAAGATTCCAAGTCTGACTTCAATCTAGGTCGATCCTACCAAGCT
GCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAG
TCGAGCTCAGAAGGTAATCATGTCCTGACCTTCAGGCCATCGGTGACTTG
ATACTAATAGTTCCTAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCC
CCAGCCTCCGGAAGGCTCGAACTTCTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1889881..1890558-

>ATCC64974_17440-T1 ID=ATCC64974_17440-T1|Name=ATCC64974_17440-T1|organism=Aspergillus niger N402|type=CDS|length=2100bp|location=Sequence derived from alignment at OGUI01000003.1:1889881..1890558- (Aspergillus niger N402)
ATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCT
CGAACTTCTAAGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAG
CGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGAGTGTCCAT
GAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGA
CAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTG
ATGGCCGGAGCGGAAAGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAG
ACATGATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACATG
GCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGG
TGAGAAGGGTCTGGGAGCTGATATATGGCTCTGCCTCAGCACAAGAAGCT
TCCCCAGCCTCCGGAAGGCTCGAACTTCTAAGTCGATCCTACCAAGCTGC
CCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTC
GAGCTCAGAAGAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCAT
TGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCG
AGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGAGTCATGCTCCTA
TGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTA
TTCTTGGCCCCCCTCACATGGCAGCTAAAGTGCCCAGAAACTTCAGACTG
CTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGATATATGGCT
CTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTA
AGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATA
CCATGGAAACTATTCTAGTCGAGCTCAGAAGAGTGTCCATGAGAACAGAA
TTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCT
ACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAG
CGGAAAGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGAT
GAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACATGGCAGCTAAAG
TGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGT
CTGGGAGCTGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCT
CCGGAAGGCTCGAACTTCTAAGTCGATCCTACCAAGCTGCCCTGCTTGGC
TCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAA
GAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGG
ACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTG
CCATGCGTTGATGGCCGGAGCGGAAAGAGTCATGCTCCTATGGTCTTGCA
GATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTTGGCCC
CCCTCACATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGC
TGGAGAAGGGTGAGAAGGGTCTGGGAGCTGATATATGGCTCTGCCTCAGC
ACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAGTCGATCCT
ACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAAC
TATTCTAGTCGAGCTCAGAAGAGTGTCCATGAGAACAGAATTTACAGCGT
CAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAAT
TCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGAGT
CATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGG
AACGGAACTATTCTTGGCCCCCCTCACATGGCAGCTAAAGTGCCCAGAAA
CTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPM2ATCC64974_17440Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17440-T1ATCC64974_17440-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17440-T1.cdsATCC64974_17440-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17440-T1.exon5ATCC64974_17440-T1.exon5Aspergillus niger N402exon
ATCC64974_17440-T1.exon4ATCC64974_17440-T1.exon4Aspergillus niger N402exon
ATCC64974_17440-T1.exon3ATCC64974_17440-T1.exon3Aspergillus niger N402exon
ATCC64974_17440-T1.exon2ATCC64974_17440-T1.exon2Aspergillus niger N402exon
ATCC64974_17440-T1.exon1ATCC64974_17440-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264UD3
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme spm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1889881..1890558 -
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