You are here

Home

ATCC64974_1780-T1, ATCC64974_1780-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_1780-T1
Unique NameATCC64974_1780-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:565456..566256+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_1780-T1 ID=ATCC64974_1780-T1|Name=ATCC64974_1780-T1|organism=Aspergillus niger N402|type=mRNA|length=801bp|location=Sequence derived from alignment at OGUI01000001.1:565456..566256+ (Aspergillus niger N402)
ATGACAACCTACACAACCGACCATGCCCAGGCAGTCCTCCAAACCCACGG
GTGGCGCACCATCTCCAATTCGGTCCCCTACGTGCTCCCCTACCTCAAAC
CCAACATGACCATCCTCGACATCGGCTGTGGCCCCGGCAGCATCACCGTC
GACTTCGCGCGACACGTCCCGGAAGGCCACGTAACAGGGGTAGAATACGT
CTCGGACCCGTTAGACCAAGCGCGCACTCTAGCCTCATCCCAAGGCATTA
CCAACATCACCTTTCAAGTAGCCGACATCCACTCCCTCCCCTTCGCCGAC
AACACCTTTGACCTAGTCCACGTGCACCAAGTCCTCCAACACATCGCGGA
TCCCGTCCTCGCCCTGCGCGAAATGCGCCGCGTCGCTAAACCTGACGGCG
GGATCATTGCCGCCCGCGAATCCAGTGCCATGACATGGTATCCCGAGAAC
AAGGGGATCGAGCTCTGGCTGGACATTGCTACTAAAATGGCTCGGGAGAA
GGGCGGGAACCCACACCCGGGGTCGAGGATCCATGTGTGGGCGGAAGAGG
CGGGGTTTCCGCAGGAAAGGATCAAGAAGACGGCGGGGTCGTGGTGCTTT
AGTAGTCCAGAGGAACGGAGGTATTGGGGTGGGTCGATGGCAGGAAGGGC
GGCCAATTCGGGGTTCGCGGCGCAGGCGGTTGAGGGTGGGTTTGCGACTA
GGGAGCAGTTGGATGGCATTGTAAAGGGGTGGGAGGAGTTTATGGAATGT
GAACAGGGGTGGTTTGGCTTGTTGCATGGGGAGATTGTTTGTTGGAAGTA
G
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:565456..566256+

>ATCC64974_1780-T1 ID=ATCC64974_1780-T1|Name=ATCC64974_1780-T1|organism=Aspergillus niger N402|type=CDS|length=801bp|location=Sequence derived from alignment at OGUI01000001.1:565456..566256+ (Aspergillus niger N402)
ATGACAACCTACACAACCGACCATGCCCAGGCAGTCCTCCAAACCCACGG
GTGGCGCACCATCTCCAATTCGGTCCCCTACGTGCTCCCCTACCTCAAAC
CCAACATGACCATCCTCGACATCGGCTGTGGCCCCGGCAGCATCACCGTC
GACTTCGCGCGACACGTCCCGGAAGGCCACGTAACAGGGGTAGAATACGT
CTCGGACCCGTTAGACCAAGCGCGCACTCTAGCCTCATCCCAAGGCATTA
CCAACATCACCTTTCAAGTAGCCGACATCCACTCCCTCCCCTTCGCCGAC
AACACCTTTGACCTAGTCCACGTGCACCAAGTCCTCCAACACATCGCGGA
TCCCGTCCTCGCCCTGCGCGAAATGCGCCGCGTCGCTAAACCTGACGGCG
GGATCATTGCCGCCCGCGAATCCAGTGCCATGACATGGTATCCCGAGAAC
AAGGGGATCGAGCTCTGGCTGGACATTGCTACTAAAATGGCTCGGGAGAA
GGGCGGGAACCCACACCCGGGGTCGAGGATCCATGTGTGGGCGGAAGAGG
CGGGGTTTCCGCAGGAAAGGATCAAGAAGACGGCGGGGTCGTGGTGCTTT
AGTAGTCCAGAGGAACGGAGGTATTGGGGTGGGTCGATGGCAGGAAGGGC
GGCCAATTCGGGGTTCGCGGCGCAGGCGGTTGAGGGTGGGTTTGCGACTA
GGGAGCAGTTGGATGGCATTGTAAAGGGGTGGGAGGAGTTTATGGAATGT
GAACAGGGGTGGTTTGGCTTGTTGCATGGGGAGATTGTTTGTTGGAAGTA
G
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_1780ATCC64974_1780Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1780-T1.exon1ATCC64974_1780-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1780-T1.cdsATCC64974_1780-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1780-T1ATCC64974_1780-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.2
NoteantiSMASH:Cluster_10000011.1
NoteEggNog:ENOG41
NoteSMCOG1089:methyltransferase
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR025714
DBxrefPFAM:PF01209
DBxrefPFAM:PF05401
DBxrefPFAM:PF07021
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:565456..566256 +
Powered by Drupal