You are here

Home

ATCC64974_18010-T1, ATCC64974_18010-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18010-T1
Unique NameATCC64974_18010-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2058463..2058961+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18010-T1 ID=ATCC64974_18010-T1|Name=ATCC64974_18010-T1|organism=Aspergillus niger N402|type=mRNA|length=499bp|location=Sequence derived from alignment at OGUI01000003.1:2058463..2058961+ (Aspergillus niger N402)
ATGCGCCTCCCAACTCTCGCCACCCTCCTCACCCTCTCCCTCACCACCCT
CGCCTCCGCCGCCGACCTCGGAATCGAAGTCACCCACGCGGTCGAATGCA
CCCGCAAGACCCAAAACGGAGATACAGTGTCCATGCACTACCGGGGCAAG
CTCGCCTCCGACGGATCCGAGTTCGATGCCAGTTACAACCGAGGCACTCC
GTTGAAGTTCAAGCTTGGTTCGGGGAGAGTTATTAAGGGGTATGTGTTTA
CCATTTCCCATCATTGCTAGCTTGCTTTTCGAGAGGAATTGTTTATGGAA
ATGGATGCTGATTTATTTGTCTGGGTGTAGATGGGATCAAGGTCTCCAGG
GCATGTGCATTGGGGAGAAGCGCACGTTGACCATTCCGCCGGAGCTGGGA
TACGGTGATCGCGGCATTGGACCGATTCCTGGCGGTGCGACGTTGATTTT
TGAGACGGAGTTGGTGGGCATTCAGGGGGTTGATAAGGATGAGTTGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:2058463..2058961+

>ATCC64974_18010-T1 ID=ATCC64974_18010-T1|Name=ATCC64974_18010-T1|organism=Aspergillus niger N402|type=CDS|length=816bp|location=Sequence derived from alignment at OGUI01000003.1:2058463..2058961+ (Aspergillus niger N402)
ATGCGCCTCCCAACTCTCGCCACCCTCCTCACCCTCTCCCTCACCACCCT
CGCCTCCGCCGCCGACCTCGGAATCGAAGTCACCCACGCGGTCGAATGCA
CCCGCAAGACCCAAAACGGAGATACAGTGTCCATGCACTACCGGGGCAAG
CTCGCCTCCGACGGATCCGAGTTCGATGCCAGTTACAACCGAGGCACTCC
GTTGAAGTTCAAGCTTGGTTCGGGGAGAGTTATTAAGGGATGGGATCAAG
GTCTCCAGGGCATGTGCATTGGGGAGAAGCGCACGTTGACCATTCCGCCG
GAGCTGGGATACGGTGATCGCGGCATTGGACCGATTCCTGGCGGTGCGAC
GTTGATTTTTGAGACGGAGTTGGTGGGCATTCAGGGGGTTGATAAGGATG
AGTTGTGAATGCGCCTCCCAACTCTCGCCACCCTCCTCACCCTCTCCCTC
ACCACCCTCGCCTCCGCCGCCGACCTCGGAATCGAAGTCACCCACGCGGT
CGAATGCACCCGCAAGACCCAAAACGGAGATACAGTGTCCATGCACTACC
GGGGCAAGCTCGCCTCCGACGGATCCGAGTTCGATGCCAGTTACAACCGA
GGCACTCCGTTGAAGTTCAAGCTTGGTTCGGGGAGAGTTATTAAGGGATG
GGATCAAGGTCTCCAGGGCATGTGCATTGGGGAGAAGCGCACGTTGACCA
TTCCGCCGGAGCTGGGATACGGTGATCGCGGCATTGGACCGATTCCTGGC
GGTGCGACGTTGATTTTTGAGACGGAGTTGGTGGGCATTCAGGGGGTTGA
TAAGGATGAGTTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_18010ATCC64974_18010Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18010-T1.exon1ATCC64974_18010-T1.exon1Aspergillus niger N402exon
ATCC64974_18010-T1.exon2ATCC64974_18010-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18010-T1.cdsATCC64974_18010-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18010-T1ATCC64974_18010-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR001179
DBxrefPFAM:PF00254
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2058463..2058961 +
Powered by Drupal