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ATCC64974_18240-T1, ATCC64974_18240-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18240-T1
Unique NameATCC64974_18240-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2116800..2117652+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18240-T1 ID=ATCC64974_18240-T1|Name=ATCC64974_18240-T1|organism=Aspergillus niger N402|type=mRNA|length=853bp|location=Sequence derived from alignment at OGUI01000003.1:2116800..2117652+ (Aspergillus niger N402)
ATGCACGCCCCCTCGATCAGCGGGATGCGTACCGCCATGCTGAGCGGACG
CCTCACCTCCAAGACGCTGGGCCCCTTCGCCCACCCCAGCAGCTGCACCA
ACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCC
ATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCC
CTCGACGACGACAACGCAGCTCCCGAGCTCTCTGGTTCTCTGCCGCGCCA
ACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGG
GACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTC
GTCGATCGTGAGCTCCCTGTTCACCACGGTCATTGGTGTGCAGGTTCTCT
CGACGCAGGATCTGGAGTCCCTCGGGGCGCAGGTCATGGGTCTTGATCCG
TTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCT
TGTCGGTCCGTTTGTGGGGAATGCTGTTTGGGGGTTGGTTTATCGCAGAT
ATAAGCCTGCTGTTATGGTGGTAAGCTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTCCCCTTTTCCCTTAATTAAGTTGCTGTTGAGAAGAAACGTGG
ATACTGATAGTGGGTTGTGTGTGTAGAAAGAGAAGGAATTCTTCGACCGC
ATTAGACGCTTCCGTGTCGACCCCTCGTCCAACTCCATTGCTAACCCCGT
TCCTGATTACTATGGTGAGAAGATCGGCAGTGTGCAGGGTTATCGCCAGT
GGTTGAAGGATCAGCGGGCGTATAACCGCAAGAGACGTCATTTCATCGTT
TAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2116800..2117652+

>ATCC64974_18240-T1 ID=ATCC64974_18240-T1|Name=ATCC64974_18240-T1|organism=Aspergillus niger N402|type=CDS|length=1494bp|location=Sequence derived from alignment at OGUI01000003.1:2116800..2117652+ (Aspergillus niger N402)
ATGCACGCCCCCTCGATCAGCGGGATGCGTACCGCCATGCTGAGCGGACG
CCTCACCTCCAAGACGCTGGGCCCCTTCGCCCACCCCAGCAGCTGCACCA
ACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCC
ATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCC
CTCGACGACGACAACGCAGCTCCCGAGCTCTCTGGTTCTCTGCCGCGCCA
ACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGG
GACTCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTC
GTCGATCGTGAGCTCCCTGTTCACCACGGTCATTGGTGTGCAGGTTCTCT
CGACGCAGGATCTGGAGTCCCTCGGGGCGCAGGTCATGGGTCTTGATCCG
TTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCT
TGTCGGTCCGTTTGTGGGGAATGCTGTTTGGGGGTTGGTTTATCGCAGAT
ATAAGCCTGCTGTTATGGTGAAAGAGAAGGAATTCTTCGACCGCATTAGA
CGCTTCCGTGTCGACCCCTCGTCCAACTCCATTGCTAACCCCGTTCCTGA
TTACTATGGTGAGAAGATCGGCAGTGTGCAGGGTTATCGCCAGTGGTTGA
AGGATCAGCGGGCGTATAACCGCAAGAGACGTCATTTCATCGTTTAGATG
CACGCCCCCTCGATCAGCGGGATGCGTACCGCCATGCTGAGCGGACGCCT
CACCTCCAAGACGCTGGGCCCCTTCGCCCACCCCAGCAGCTGCACCAACC
CGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCCATG
CGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCCCTC
GACGACGACAACGCAGCTCCCGAGCTCTCTGGTTCTCTGCCGCGCCAACT
CCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGGGAC
TCGTTCTTCAAGCTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTCGTC
GATCGTGAGCTCCCTGTTCACCACGGTCATTGGTGTGCAGGTTCTCTCGA
CGCAGGATCTGGAGTCCCTCGGGGCGCAGGTCATGGGTCTTGATCCGTTT
GTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCTTGT
CGGTCCGTTTGTGGGGAATGCTGTTTGGGGGTTGGTTTATCGCAGATATA
AGCCTGCTGTTATGGTGAAAGAGAAGGAATTCTTCGACCGCATTAGACGC
TTCCGTGTCGACCCCTCGTCCAACTCCATTGCTAACCCCGTTCCTGATTA
CTATGGTGAGAAGATCGGCAGTGTGCAGGGTTATCGCCAGTGGTTGAAGG
ATCAGCGGGCGTATAACCGCAAGAGACGTCATTTCATCGTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0001405PAM complex, Tim23 associated import motor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PAM17ATCC64974_18240Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18240-T1.exon1ATCC64974_18240-T1.exon1Aspergillus niger N402exon
ATCC64974_18240-T1.exon2ATCC64974_18240-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18240-T1.cdsATCC64974_18240-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18240-T1ATCC64974_18240-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264HN5
DBxrefInterPro:IPR013875
DBxrefPFAM:PF08566
ProductTIM23 complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2116800..2117652 +
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