You are here

Home

ATCC64974_1830-T1, ATCC64974_1830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_1830-T1
Unique NameATCC64974_1830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:585140..587004-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_1830-T1 ID=ATCC64974_1830-T1|Name=ATCC64974_1830-T1|organism=Aspergillus niger N402|type=mRNA|length=1865bp|location=Sequence derived from alignment at OGUI01000001.1:585140..587004- (Aspergillus niger N402)
ATGATGCTCCCAAAGCTCGCGTCACTCATCGCCCTCCCAGCATTGGCTGC
GGCCAACTGCAAAACCGCCCCTGGTGATGCAGCTTGGCCTTCAATCGAGG
AGTGGTCGGCTCTGAACCAGTCCATTGGCGGGTCTCTCATTCGAACTTCT
CCTGCTGCCTCTTCCTGTTATGCAGGAAATCCACTAAGTTCGCCGTACAA
CTGCTCCTCGGTGAAGGATCACTGGTCCTACGCAGCCTACCATGCCGCAT
GGCCTGAAAGCAACGACTACTCCATCTACAACAACAATTCCTGCGTACCC
CCAGGTGTCTCTGGGTACACCAAAGACAAGGGATGCAGTATAGGCGGAAT
GCCCCAATACATCGTCAATGCCACTACCGAAGAGCAAGTCGCAACGGCCA
TGTCATGGGCATCGCAGAGGAACATCCGCGTCGTCGTGAAGTCTACAGGC
CACGATCTTAACGGTCGGTATGTATCTCCCCATCACTTTAATCACTCAAC
GATGCCAAACCAATCTAACATATCCTCTGCTCAAGATCAACCGGCGCATA
CTCGCTCTCAATTTGGACGCACAACTTCAAAAGCATCCACCACAACCCAA
CCTGGCATCTCCCCGGCACCAACAAAACCGCAGACGTGCTGATCTGCGGC
GGCGGTAACAATTGGGGGACAGTATATACTACAGCTGTAACCCAATTTAA
CCGAACAGTAGTAGGCGGCGAAGACGCCACAGTAGGCCTAGGAGGCCTGA
TCCAAAACGGCGGCCACGGCCTCCTATCCAGCCACTATGGCCTCGCCTCC
GACAATGTCTACCAAGTCACAGTCGTCACACCCGAAGGCCACATCCTCAC
CGCGAACGACGCCCAAAACCAAGACCTCTTCTGGGCGGTCCGAGGCGCTG
GAGGCGGCCAATTTGGTGTGGTGACCGAGTTCATCCTCCAAACGCATCCC
ATCCCAGACAACGTCGTAACCGGCGGCCTAACCTTCTACGCATCCAGCAA
ATCCAACGCCTCAGAACTAGCCTCCTGGACAGCCTTCGCCAAAACAGCAG
CCCAGGTCCCCGACCTCATGGACTCCGGCATCACAGGAACCATCATGGCC
GCGACCGGCGAATCAGCAAGCACATACACAGGCCTCGACGAAGTCCTTCC
CGGCCCAGCAGTGATCATCAGCCTGATCGCCTACAACTCAACCGTCCAAG
CCATGAACACCACTCTCCACAACCTATCCACCCAACTCACTAATCATACT
ACCCAAATAAACACCACACTCACACCACCAACCTCGTACTCTTACTGGTC
CTACATCAAACCCAACTTCCTCGCCAGCCAATCCGCCGGCGCATCCAGCC
TCTTCACAAGCCGCCTCCTCGGCAAATCCGAGCTCTCGTCCCTCCCACAG
CCAGACCTCATCCACTACCTGCAGCAAATCTCCGCCTCCCAATCTGGAGA
TGGCACCCTCCTCATCTTCGGCCTCCAGGGCGGCCGCGGCACCGCTAACG
TGCCTGAACAACGTCGCGGAAGCGTGCTTCCCTCGTGGCGCAGCGCATAC
GCACACGTCATGGCGTATGGCGGCTCCGTGAACGCTACAGGTGATCCTGC
TGCGTCGTTGGCTGATGCAGCGGAGTGGTATGAGAGTGTGCTGGAGCCGG
TGTGGAGGGATTGGGCGCCGAATATGGGCGCGTACATGAACGAGGGCAAT
CCATTTAGTAGTACCTGGAAAAGGGACTTTTATGGGGATGGGTATGAGAA
GTTAGCGGAGGTTAAGAGGAGGTATGATCCGAATGGGAGTCTTTGGGTGT
ATGCGGGGGTGGGAAGTGATTTGTGGGAGTTTGATTTGAGGAGTGGGCTG
CTCTGTAGGGTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:585140..587004-

>ATCC64974_1830-T1 ID=ATCC64974_1830-T1|Name=ATCC64974_1830-T1|organism=Aspergillus niger N402|type=CDS|length=3594bp|location=Sequence derived from alignment at OGUI01000001.1:585140..587004- (Aspergillus niger N402)
ATCAACCGGCGCATACTCGCTCTCAATTTGGACGCACAACTTCAAAAGCA
TCCACCACAACCCAACCTGGCATCTCCCCGGCACCAACAAAACCGCAGAC
GTGCTGATCTGCGGCGGCGGTAACAATTGGGGGACAGTATATACTACAGC
TGTAACCCAATTTAACCGAACAGTAGTAGGCGGCGAAGACGCCACAGTAG
GCCTAGGAGGCCTGATCCAAAACGGCGGCCACGGCCTCCTATCCAGCCAC
TATGGCCTCGCCTCCGACAATGTCTACCAAGTCACAGTCGTCACACCCGA
AGGCCACATCCTCACCGCGAACGACGCCCAAAACCAAGACCTCTTCTGGG
CGGTCCGAGGCGCTGGAGGCGGCCAATTTGGTGTGGTGACCGAGTTCATC
CTCCAAACGCATCCCATCCCAGACAACGTCGTAACCGGCGGCCTAACCTT
CTACGCATCCAGCAAATCCAACGCCTCAGAACTAGCCTCCTGGACAGCCT
TCGCCAAAACAGCAGCCCAGGTCCCCGACCTCATGGACTCCGGCATCACA
GGAACCATCATGGCCGCGACCGGCGAATCAGCAAGCACATACACAGGCCT
CGACGAAGTCCTTCCCGGCCCAGCAGTGATCATCAGCCTGATCGCCTACA
ACTCAACCGTCCAAGCCATGAACACCACTCTCCACAACCTATCCACCCAA
CTCACTAATCATACTACCCAAATAAACACCACACTCACACCACCAACCTC
GTACTCTTACTGGTCCTACATCAAACCCAACTTCCTCGCCAGCCAATCCG
CCGGCGCATCCAGCCTCTTCACAAGCCGCCTCCTCGGCAAATCCGAGCTC
TCGTCCCTCCCACAGCCAGACCTCATCCACTACCTGCAGCAAATCTCCGC
CTCCCAATCTGGAGATGGCACCCTCCTCATCTTCGGCCTCCAGGGCGGCC
GCGGCACCGCTAACGTGCCTGAACAACGTCGCGGAAGCGTGCTTCCCTCG
TGGCGCAGCGCATACGCACACGTCATGGCGTATGGCGGCTCCGTGAACGC
TACAGGTGATCCTGCTGCGTCGTTGGCTGATGCAGCGGAGTGGTATGAGA
GTGTGCTGGAGCCGGTGTGGAGGGATTGGGCGCCGAATATGGGCGCGTAC
ATGAACGAGGGCAATCCATTTAGTAGTACCTGGAAAAGGGACTTTTATGG
GGATGGGTATGAGAAGTTAGCGGAGGTTAAGAGGAGGTATGATCCGAATG
GGAGTCTTTGGGTGTATGCGGGGGTGGGAAGTGATTTGTGGGAGTTTGAT
TTGAGGAGTGGGCTGCTCTGTAGGGTGTAGATGATGCTCCCAAAGCTCGC
GTCACTCATCGCCCTCCCAGCATTGGCTGCGGCCAACTGCAAAACCGCCC
CTGGTGATGCAGCTTGGCCTTCAATCGAGGAGTGGTCGGCTCTGAACCAG
TCCATTGGCGGGTCTCTCATTCGAACTTCTCCTGCTGCCTCTTCCTGTTA
TGCAGGAAATCCACTAAGTTCGCCGTACAACTGCTCCTCGGTGAAGGATC
ACTGGTCCTACGCAGCCTACCATGCCGCATGGCCTGAAAGCAACGACTAC
TCCATCTACAACAACAATTCCTGCGTACCCCCAGGTGTCTCTGGGTACAC
CAAAGACAAGGGATGCAGTATAGGCGGAATGCCCCAATACATCGTCAATG
CCACTACCGAAGAGCAAGTCGCAACGGCCATGTCATGGGCATCGCAGAGG
AACATCCGCGTCGTCGTGAAGTCTACAGGCCACGATCTTAACGGTCGATC
AACCGGCGCATACTCGCTCTCAATTTGGACGCACAACTTCAAAAGCATCC
ACCACAACCCAACCTGGCATCTCCCCGGCACCAACAAAACCGCAGACGTG
CTGATCTGCGGCGGCGGTAACAATTGGGGGACAGTATATACTACAGCTGT
AACCCAATTTAACCGAACAGTAGTAGGCGGCGAAGACGCCACAGTAGGCC
TAGGAGGCCTGATCCAAAACGGCGGCCACGGCCTCCTATCCAGCCACTAT
GGCCTCGCCTCCGACAATGTCTACCAAGTCACAGTCGTCACACCCGAAGG
CCACATCCTCACCGCGAACGACGCCCAAAACCAAGACCTCTTCTGGGCGG
TCCGAGGCGCTGGAGGCGGCCAATTTGGTGTGGTGACCGAGTTCATCCTC
CAAACGCATCCCATCCCAGACAACGTCGTAACCGGCGGCCTAACCTTCTA
CGCATCCAGCAAATCCAACGCCTCAGAACTAGCCTCCTGGACAGCCTTCG
CCAAAACAGCAGCCCAGGTCCCCGACCTCATGGACTCCGGCATCACAGGA
ACCATCATGGCCGCGACCGGCGAATCAGCAAGCACATACACAGGCCTCGA
CGAAGTCCTTCCCGGCCCAGCAGTGATCATCAGCCTGATCGCCTACAACT
CAACCGTCCAAGCCATGAACACCACTCTCCACAACCTATCCACCCAACTC
ACTAATCATACTACCCAAATAAACACCACACTCACACCACCAACCTCGTA
CTCTTACTGGTCCTACATCAAACCCAACTTCCTCGCCAGCCAATCCGCCG
GCGCATCCAGCCTCTTCACAAGCCGCCTCCTCGGCAAATCCGAGCTCTCG
TCCCTCCCACAGCCAGACCTCATCCACTACCTGCAGCAAATCTCCGCCTC
CCAATCTGGAGATGGCACCCTCCTCATCTTCGGCCTCCAGGGCGGCCGCG
GCACCGCTAACGTGCCTGAACAACGTCGCGGAAGCGTGCTTCCCTCGTGG
CGCAGCGCATACGCACACGTCATGGCGTATGGCGGCTCCGTGAACGCTAC
AGGTGATCCTGCTGCGTCGTTGGCTGATGCAGCGGAGTGGTATGAGAGTG
TGCTGGAGCCGGTGTGGAGGGATTGGGCGCCGAATATGGGCGCGTACATG
AACGAGGGCAATCCATTTAGTAGTACCTGGAAAAGGGACTTTTATGGGGA
TGGGTATGAGAAGTTAGCGGAGGTTAAGAGGAGGTATGATCCGAATGGGA
GTCTTTGGGTGTATGCGGGGGTGGGAAGTGATTTGTGGGAGTTTGATTTG
AGGAGTGGGCTGCTCTGTAGGGTGTAGATGATGCTCCCAAAGCTCGCGTC
ACTCATCGCCCTCCCAGCATTGGCTGCGGCCAACTGCAAAACCGCCCCTG
GTGATGCAGCTTGGCCTTCAATCGAGGAGTGGTCGGCTCTGAACCAGTCC
ATTGGCGGGTCTCTCATTCGAACTTCTCCTGCTGCCTCTTCCTGTTATGC
AGGAAATCCACTAAGTTCGCCGTACAACTGCTCCTCGGTGAAGGATCACT
GGTCCTACGCAGCCTACCATGCCGCATGGCCTGAAAGCAACGACTACTCC
ATCTACAACAACAATTCCTGCGTACCCCCAGGTGTCTCTGGGTACACCAA
AGACAAGGGATGCAGTATAGGCGGAATGCCCCAATACATCGTCAATGCCA
CTACCGAAGAGCAAGTCGCAACGGCCATGTCATGGGCATCGCAGAGGAAC
ATCCGCGTCGTCGTGAAGTCTACAGGCCACGATCTTAACGGTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_1830ATCC64974_1830Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1830-T1ATCC64974_1830-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1830-T1.cdsATCC64974_1830-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1830-T1.exon2ATCC64974_1830-T1.exon2Aspergillus niger N402exon
ATCC64974_1830-T1.exon1ATCC64974_1830-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.3
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
NoteSMCOG1138:FAD linked oxidase domain protein
NoteCAZy:AA7
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR012951
DBxrefInterPro:IPR006094
DBxrefPFAM:PF01565
DBxrefPFAM:PF08031
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:585140..587004 -
Powered by Drupal