You are here

Home

ATCC64974_18510-T1, ATCC64974_18510-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18510-T1
Unique NameATCC64974_18510-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2200301..2201454-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18510-T1 ID=ATCC64974_18510-T1|Name=ATCC64974_18510-T1|organism=Aspergillus niger N402|type=mRNA|length=1154bp|location=Sequence derived from alignment at OGUI01000003.1:2200301..2201454- (Aspergillus niger N402)
ATGGCATCCGTTTACAAGACTATCTCAAAGAAGGCAGCTCGTCAGCTCGC
CAAGGAGGAGGAGTTCGATGAGGAGGATATCGAGATGGAGGAACTTCTCG
ACAACGCCGACGACACCACCGACAGCGAAAGCGATGAAGAAACTACGACC
GAATCGGCCAAGAAGCAGCTCGCTCAAGGATTCATGCCCAAGACTCGTGT
ACTGATGCTAACCTCTCGAGGTGTGACATACCGGTATGCTTGATGCCCCC
ATCCAACATGATATATTAACAATGTGCGAATGTGACGCTAATCTTTTCTG
TTTGCTGCAGCCATCGACACCTGCTCGCCGACCTTGCGTCTCTGCTTCCT
CACACTCACAAGGAAAGCAAACTTGACACCAAGAAGAAGACCGCTGGATA
CAATCTGCTCCTTAACTCTCTTGCCGACCTTCACTCCTGCAATGTGATTT
TCTTCCTCGAGGCTCGTAAGCAGGGTCAGGACTTGTACCTCTGGCTTGCT
CGTCCTCCCAATGGCCCGACGATCAAGTTCCACGTCGCCAACTTGCACAC
AATGGCTGAATTGAATGCTGGATTCAGCGGCAACTGCCTCAAGGGTGGCC
GTGGTCTTGTTGTTTTCGATCGCTCTTTCGACGAACAGGGTCCGCTCATG
AGCCAACCCGGCAACGAATACCGGGGTCTGATCAGAGAGATGCTGCGCGG
TGTCTTCTGTGTCCCTAAGCGTGGTGTCAAGGGCATGAAGCCATTCATTG
ACCGCATCATCGGTGTCTTCGGTGTCGATGGCAAGATCTGGATTCGAGTC
TACGAGATCCGCGAGTCCGAACCCGGAAAGAAGTCTGAGGATGGTGCAGA
TGCCAAGCCCACTCCCAAGAGCAAGGACGGTCAGCCGGAGGTTTCTCTGG
TCGAGATCGGCCCCCGTTTTGTTCTTACGCCTATTGTCATCCTGGAGGGC
AGCTTTGGCGGCCCTGTCATCTATGAGAACAAGGAGTACGTGAGCCCGAA
CCAGGTCCGTCGCGAGGTCCGCATGAGCAAGGCGGCTCGCTACGCCAAGC
GCAGAGATGGGCAGACCGACCGGTTCGCGAAGCGGTCGAACCTGGGATTG
GGAGAAGGCGAGAGGAAGCCGGATGCGCTCGACACAAGGCAACTGTTCAA
GTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:2200301..2201454-

>ATCC64974_18510-T1 ID=ATCC64974_18510-T1|Name=ATCC64974_18510-T1|organism=Aspergillus niger N402|type=CDS|length=2154bp|location=Sequence derived from alignment at OGUI01000003.1:2200301..2201454- (Aspergillus niger N402)
CCATCGACACCTGCTCGCCGACCTTGCGTCTCTGCTTCCTCACACTCACA
AGGAAAGCAAACTTGACACCAAGAAGAAGACCGCTGGATACAATCTGCTC
CTTAACTCTCTTGCCGACCTTCACTCCTGCAATGTGATTTTCTTCCTCGA
GGCTCGTAAGCAGGGTCAGGACTTGTACCTCTGGCTTGCTCGTCCTCCCA
ATGGCCCGACGATCAAGTTCCACGTCGCCAACTTGCACACAATGGCTGAA
TTGAATGCTGGATTCAGCGGCAACTGCCTCAAGGGTGGCCGTGGTCTTGT
TGTTTTCGATCGCTCTTTCGACGAACAGGGTCCGCTCATGAGCCAACCCG
GCAACGAATACCGGGGTCTGATCAGAGAGATGCTGCGCGGTGTCTTCTGT
GTCCCTAAGCGTGGTGTCAAGGGCATGAAGCCATTCATTGACCGCATCAT
CGGTGTCTTCGGTGTCGATGGCAAGATCTGGATTCGAGTCTACGAGATCC
GCGAGTCCGAACCCGGAAAGAAGTCTGAGGATGGTGCAGATGCCAAGCCC
ACTCCCAAGAGCAAGGACGGTCAGCCGGAGGTTTCTCTGGTCGAGATCGG
CCCCCGTTTTGTTCTTACGCCTATTGTCATCCTGGAGGGCAGCTTTGGCG
GCCCTGTCATCTATGAGAACAAGGAGTACGTGAGCCCGAACCAGGTCCGT
CGCGAGGTCCGCATGAGCAAGGCGGCTCGCTACGCCAAGCGCAGAGATGG
GCAGACCGACCGGTTCGCGAAGCGGTCGAACCTGGGATTGGGAGAAGGCG
AGAGGAAGCCGGATGCGCTCGACACAAGGCAACTGTTCAAGTGAATGGCA
TCCGTTTACAAGACTATCTCAAAGAAGGCAGCTCGTCAGCTCGCCAAGGA
GGAGGAGTTCGATGAGGAGGATATCGAGATGGAGGAACTTCTCGACAACG
CCGACGACACCACCGACAGCGAAAGCGATGAAGAAACTACGACCGAATCG
GCCAAGAAGCAGCTCGCTCAAGGATTCATGCCCAAGACTCGTGTACTGAT
GCTAACCTCTCGAGGTGTGACATACCGCCATCGACACCTGCTCGCCGACC
TTGCGTCTCTGCTTCCTCACACTCACAAGGAAAGCAAACTTGACACCAAG
AAGAAGACCGCTGGATACAATCTGCTCCTTAACTCTCTTGCCGACCTTCA
CTCCTGCAATGTGATTTTCTTCCTCGAGGCTCGTAAGCAGGGTCAGGACT
TGTACCTCTGGCTTGCTCGTCCTCCCAATGGCCCGACGATCAAGTTCCAC
GTCGCCAACTTGCACACAATGGCTGAATTGAATGCTGGATTCAGCGGCAA
CTGCCTCAAGGGTGGCCGTGGTCTTGTTGTTTTCGATCGCTCTTTCGACG
AACAGGGTCCGCTCATGAGCCAACCCGGCAACGAATACCGGGGTCTGATC
AGAGAGATGCTGCGCGGTGTCTTCTGTGTCCCTAAGCGTGGTGTCAAGGG
CATGAAGCCATTCATTGACCGCATCATCGGTGTCTTCGGTGTCGATGGCA
AGATCTGGATTCGAGTCTACGAGATCCGCGAGTCCGAACCCGGAAAGAAG
TCTGAGGATGGTGCAGATGCCAAGCCCACTCCCAAGAGCAAGGACGGTCA
GCCGGAGGTTTCTCTGGTCGAGATCGGCCCCCGTTTTGTTCTTACGCCTA
TTGTCATCCTGGAGGGCAGCTTTGGCGGCCCTGTCATCTATGAGAACAAG
GAGTACGTGAGCCCGAACCAGGTCCGTCGCGAGGTCCGCATGAGCAAGGC
GGCTCGCTACGCCAAGCGCAGAGATGGGCAGACCGACCGGTTCGCGAAGC
GGTCGAACCTGGGATTGGGAGAAGGCGAGAGGAAGCCGGATGCGCTCGAC
ACAAGGCAACTGTTCAAGTGAATGGCATCCGTTTACAAGACTATCTCAAA
GAAGGCAGCTCGTCAGCTCGCCAAGGAGGAGGAGTTCGATGAGGAGGATA
TCGAGATGGAGGAACTTCTCGACAACGCCGACGACACCACCGACAGCGAA
AGCGATGAAGAAACTACGACCGAATCGGCCAAGAAGCAGCTCGCTCAAGG
ATTCATGCCCAAGACTCGTGTACTGATGCTAACCTCTCGAGGTGTGACAT
ACCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_18510ATCC64974_18510Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18510-T1ATCC64974_18510-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18510-T1.cdsATCC64974_18510-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18510-T1.exon2ATCC64974_18510-T1.exon2Aspergillus niger N402exon
ATCC64974_18510-T1.exon1ATCC64974_18510-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR007109
DBxrefPFAM:PF04427
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2200301..2201454 -
Powered by Drupal