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ATCC64974_18740-T1, ATCC64974_18740-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18740-T1
Unique NameATCC64974_18740-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2257662..2258887+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18740-T1 ID=ATCC64974_18740-T1|Name=ATCC64974_18740-T1|organism=Aspergillus niger N402|type=mRNA|length=1226bp|location=Sequence derived from alignment at OGUI01000003.1:2257662..2258887+ (Aspergillus niger N402)
ATGGTGAGTTCCCCGCTTAGGCGCCGTTATGTACTGAGGTGTATACATGC
TGATACCCGGATGATGACAGTTTCGTTCTGGATACTGGGATGACGATCCC
ATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCG
TTTCGATGAATACTACCGCTGCTATCCTGTCGCCATGATGCCCGGCCCGG
AGAGAGAGAACGTGAACCACGGCGGCAAGGTCATCATGCCGCCCAGCGCT
CTTGACAAGCTTACTCGCCTTCATATTACGTATCCGATGCTGTTCGAGCT
TCACAACGGTGCACGGGAAAGGTTGACGCACGCTGGTGTACTAGAGTTCA
TTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGGGTAATGTGCTTCTCA
TGATAGGTACCCTGCAGGATACTGACTATTTGATCTCCCGCAGCTCATGC
AAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAGTCGACCGAT
CTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTACCTCATTCCT
CGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCCGTAACTTCT
CCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAACGACCAGGTT
TATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACACGAATGCCAT
TTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTCCTGTGGGCT
ATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGTAGTGGAGTA
AGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGGAACCATGGC
ACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTGATGCTGCGG
CGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGACAGCGTCTG
AATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTCTACTCCTAC
CCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGAAGACCAACG
GCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTTGGATATGCA
ATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACTCGAGGACAA
GCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGAAGAAAGACG
CAAGTGGCTCGGCAACCCCTACTTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2257662..2258887+

>ATCC64974_18740-T1 ID=ATCC64974_18740-T1|Name=ATCC64974_18740-T1|organism=Aspergillus niger N402|type=CDS|length=3303bp|location=Sequence derived from alignment at OGUI01000003.1:2257662..2258887+ (Aspergillus niger N402)
ATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATGGG
TGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTACC
GCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGAAC
CACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACTCG
CCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACGGG
AAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGAAG
ATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGTGA
TCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAAGC
TGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCGTG
CTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTCTT
CACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAACCA
AGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAGAA
GTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGCGG
CACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGGC
TGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTATT
GCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGAA
CTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAACAT
CCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGCAT
CCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGCCA
CAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGACG
AGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTCAA
ACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACTTA
AATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATGG
GTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTAC
CGCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGAA
CCACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACTC
GCCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACGG
GAAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGAA
GATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGTG
ATCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAAG
CTGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCGT
GCTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTCT
TCACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAACC
AAGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAGA
AGTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGCG
GCACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGG
CTGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTAT
TGCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGA
ACTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAACA
TCCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGCA
TCCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGCC
ACAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGAC
GAGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTCA
AACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACTT
AAATGTTTCGTTCTGGATACTGGGATGACGATCCCATGAACGGAGTCATG
GGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCGTTTCGATGAATACTA
CCGCTGCTATCCTGTCGCCATGATGCCCGGCCCGGAGAGAGAGAACGTGA
ACCACGGCGGCAAGGTCATCATGCCGCCCAGCGCTCTTGACAAGCTTACT
CGCCTTCATATTACGTATCCGATGCTGTTCGAGCTTCACAACGGTGCACG
GGAAAGGTTGACGCACGCTGGTGTACTAGAGTTCATTGCGGAAGAGGGGA
AGATCTATCTACCTTTCTGGCTCATGCAAACTCTCCTTCTGGAACCCGGT
GATCTCGTACAGGTCAAGTCGACCGATCTCCCACCCGGCCAATTCATCAA
GCTGCAAGCTCAATCTACCTCATTCCTCGATATAAGTGACCCGAAGGCCG
TGCTGGAGAATGCTTTCCGTAACTTCTCCTGTCTGACCAAGGGAGATGTC
TTCACATTTGCATACAACGACCAGGTTTATGAGATGGCGGTCTTGGAAAC
CAAGCCATCCACCGACACGAATGCCATTTCCGTGCTCGAGACAGATCTAG
AAGTGGACTTTGCGCCTCCTGTGGGCTATGAGGAGCCTCAACGGCCCAGC
GGCACCAGTACTCCTCGTAGTGGAGTAAGCAACAAGCTGCCCTCTGGTGG
GCTGCTTCATCCCCATGGAACCATGGCACAGGCGATCAACTACGCTGCTA
TTGCCCCGGAGTCGACTGATGCTGCGGCGGGTGCCCGAGCGGTCTCATCG
AACTTCCTTAGTGGAGGACAGCGTCTGAATGCCAAGAAGGGAAGCAAAAC
ATCCACACCAAAACCGTCTACTCCTACCCCAGGAACAACGAACCCGCAGC
ATCCCCCTCCTGTCAGGAAGACCAACGGCCCGCAACCTCTGCGGTTAGGC
CACAACCAGCTATTCTTTGGATATGCAATCAAGCCAGTGAAGAAGCGCGA
CGAGAGCGGACAGGTACTCGAGGACAAGCCTCGCTTCCAGGGATCTGGTC
AAACATTACGAGGAAAGAAGAAAGACGCAAGTGGCTCGGCAACCCCTACT
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_18740ATCC64974_18740Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18740-T1.exon1ATCC64974_18740-T1.exon1Aspergillus niger N402exon
ATCC64974_18740-T1.exon2ATCC64974_18740-T1.exon2Aspergillus niger N402exon
ATCC64974_18740-T1.exon3ATCC64974_18740-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18740-T1.cdsATCC64974_18740-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18740-T1ATCC64974_18740-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263WLB
DBxrefInterPro:IPR042299
DBxrefInterPro:IPR004854
DBxrefPFAM:PF03152
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2257662..2258887 +
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