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ATCC64974_18880-T1, ATCC64974_18880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18880-T1
Unique NameATCC64974_18880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2311125..2312829-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18880-T1 ID=ATCC64974_18880-T1|Name=ATCC64974_18880-T1|organism=Aspergillus niger N402|type=mRNA|length=1705bp|location=Sequence derived from alignment at OGUI01000003.1:2311125..2312829- (Aspergillus niger N402)
ATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAGTCGCTGCTCA
GTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGATCGCATATCGA
AGCTTGCGCGCATGCAGCTTGAAGAGGCGCAGGGTGATTTGAAGGCTGCG
CAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTGCGGATGATGC
TATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGG
AGGGTGCTGCAGAGTGAGTTGTCCCGTTGTATACCATTGGGTTTGGTTCG
CGTCGGGCAATGAGGGACGAATGCTAACATATTTGATGATGAAAGTGACG
ACGACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACGAGGTC
GACGAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCGCTCGC
TTATCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCCGGAGG
AGGAAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATAACCTG
CTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTCTACGT
CTACGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCATGCTGC
CCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCAAGACG
GCCGAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATGGAACC
CGACATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCCCAACG
CGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGAAGTCC
AAGAAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCGATCCT
CGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGGATCTG
CCGACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCGCCAAG
TCGTACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCACCCGAC
CGAATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGTGGCAG
CGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATGCGGAT
GTCGAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTACGTGAC
GACGGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCCCGCCT
CGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACTCGTCG
GTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTGACCGG
GTCAACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAAGCCCA
GCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGACCACT
TTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGCAGCAA
GGGCGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCGTCGGG
CGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAACGTCTG
GTCGGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGCGTGCA
GGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGATGAGG
ATTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2311125..2312829-

>ATCC64974_18880-T1 ID=ATCC64974_18880-T1|Name=ATCC64974_18880-T1|organism=Aspergillus niger N402|type=CDS|length=3246bp|location=Sequence derived from alignment at OGUI01000003.1:2311125..2312829- (Aspergillus niger N402)
TGACGACGACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACG
AGGTCGACGAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCG
CTCGCTTATCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCC
GGAGGAGGAAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATA
ACCTGCTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTC
TACGTCTACGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCAT
GCTGCCCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCA
AGACGGCCGAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATG
GAACCCGACATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCC
CAACGCGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGA
AGTCCAAGAAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCG
ATCCTCGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGG
ATCTGCCGACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCG
CCAAGTCGTACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCAC
CCGACCGAATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGT
GGCAGCGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATG
CGGATGTCGAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTAC
GTGACGACGGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCC
CGCCTCGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACT
CGTCGGTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTG
ACCGGGTCAACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAA
GCCCAGCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGA
CCACTTTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGC
AGCAAGGGCGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCG
TCGGGCGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAAC
GTCTGGTCGGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGC
GTGCAGGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGA
TGAGGATTGAATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAG
TCGCTGCTCAGTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGAT
CGCATATCGAAGCTTGCGCGCATGCAGCTTGAAGAGGCGCAGGGTGATTT
GAAGGCTGCGCAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTG
CGGATGATGCTATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGGAGAAG
AAGAAGAAGGAGGGTGCTGCAGATGACGACGACGACCTGAAGGAATACGA
TCTGGATCACTACGATAGCGACGAGGTCGACGAGGACGGCGAGAAGATCA
CCATGTTCGGCAATGTCAAGTCGCTCGCTTATCACCAGCCCAACGAGGAG
GACCCGTACCTGGTTATGCCGCCGGAGGAGGAAGACGAGGAGAGAGAGGA
ACTGCAGATTATGCCGACGGATAACCTGCTGTTGGCGGGTAAGGTTGAGG
ACGAGGTTGCTCATCTGGAAGTCTACGTCTACGAGGATGCCGCCGACAAC
CTTTACGTGCACCACGATATCATGCTGCCCGCTATTCCGTTGGCGCTAGA
GTGGTTGGACATCCCCGTTGGCAAGACGGCCGAGGGCCGCACTACCGGTA
ACTTCGTGGCTATCGGAACAATGGAACCCGACATTGAGATCTGGGACCTC
GATGTCGTCGACAGCATGTACCCCAACGCGATCCTGGGCCAGGGTGGTGC
CGATGCCGAGAACGGCGCGAAGAAGTCCAAGAAGAAGAAGGCCAAGGCCA
ACGACGAATATCACATCGACTCGATCCTCGCTCTGGCTGCGAACCGCCAG
CACCGCAACCTCCTGGCCTCTGGATCTGCCGACCGCACCGTCAAGCTCTG
GGATCTCCAGACCACCAAGTGCGCCAAGTCGTACTCCCACCACACCGACA
AGGTGTGCGCGCTGGAGTGGCACCCGACCGAATCGACCGTCCTGCTGAGC
GGTAGCTACGACCGCACGGTGGTGGCAGCGGACATGAGAGCCCCCGACTC
CAAGGCGCGCTGGGGCGTGGATGCGGATGTCGAGAACGTGCGCTGGGACG
TGCACGACCCGAACTACTTCTACGTGACGACGGACGCCGGTATGGTGTAC
CGCTACGATGTGCGGAACATTCCCGCCTCGCCCAAGGAGTCCAAGCCCGT
GTGGACGCTGCAGGCGCACGACTCGTCGGTGTCGTCGTTCGACGTCAACC
CCACCGTGCCGGGCTACCTGGTGACCGGGTCAACGGACAAGTCCGTTAAG
CTCTGGAACATTGAGAACGACAAGCCCAGCATGGTGGTGTCTCGCAAGAT
GGAAGTGGGCAAGATCTTCTCGACCACTTTCGCGCCGGATGCTGATGTGA
GCTTCCGCCTGGCTGTGGCGGGCAGCAAGGGCGTGGTCCAGATCTGGGAT
ACCTCCACTAACGCGGCGGTGCGTCGGGCGTTCGTCTCGCGGGTGCCTAC
CCTGGAGGGCGAGGTGCAGGAACGTCTGGTCGGTATTCAGCCCGACCAGG
ATGAGTCGGATGAGGAGGAAGGCGTGCAGGAGGTTGGAGCGGCGCAAGGT
GCGGATGGCTGGGAATCGATGGATGAGGATTGAATGTCTATGATTACCAC
TTCCGCTTGGGTGCGGCGCGGAGTCGCTGCTCAGTTCCCTACGAAATATG
AGATCAATGAGGAGGAAATGGATCGCATATCGAAGCTTGCGCGCATGCAG
CTTGAAGAGGCGCAGGGTGATTTGAAGGCTGCGCAGGAGGATGAGGAGAT
GGAGGAGGATAAGAAGGAGGGTGCGGATGATGCTATGGAGGATGATTCCA
AGGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGGAGGGTGCTGCAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_18880ATCC64974_18880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18880-T1ATCC64974_18880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18880-T1.cdsATCC64974_18880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18880-T1.exon2ATCC64974_18880-T1.exon2Aspergillus niger N402exon
ATCC64974_18880-T1.exon1ATCC64974_18880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09261DW8
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2311125..2312829 -
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