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ATCC64974_18930-T1, ATCC64974_18930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18930-T1
Unique NameATCC64974_18930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2320599..2321799-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18930-T1 ID=ATCC64974_18930-T1|Name=ATCC64974_18930-T1|organism=Aspergillus niger N402|type=mRNA|length=1201bp|location=Sequence derived from alignment at OGUI01000003.1:2320599..2321799- (Aspergillus niger N402)
ATGTCCGACAAGATTAGCTTATTACCTCTGGAACTCATCCTTCACATACT
CTCCTACCTTCCCTTCGAGTCCTTGCTTGCCTTCGGCGAAACATCTCGCA
CCAACTATGAGTCCCATACCCTCTGTCTTGAGTGTCTACGACTAGGAGTT
TTTGAGAAGCGCATCCACTCTGTGATTTCCTTACTCCAGGCTGGCTGGAC
CACCCCGGATCAAATGGCACAGATTTCCAGTCACAACAAACAAGCGAACG
ACTACACAATATCCATCATCCAACCTGCTATGAGCCGGCTTGCAAGCGAC
CTGGACAGCAAGCCTCTGCTAAAAATCAAAAGCTTGAAAAGACGGTGCCC
AGCACTACTCGAAAAATCCCGGACATTGGAGCAGATGACTCGGGAGCAGA
ACAGGGTCTTTGCCCAAGTGGTGAATCGGTATGGTCGAGGCCTTAGGAAA
CTGGAGTTCATGGCGTATGATCTTGACAGCGAGGGTGCCATGGCTCTAGC
TTCTAAATGCCAGAATATATTGCATCATCTAGCATTGCGCTTCGAGCATC
CACATATTCGGGATGGCCCCATCAGACCCAGCACTTGGATGAATCCTGCC
CCAGGAAGTACGGCATGGAACATGTTCCTCGGTATAGGACGGTACCCACA
ATTTGGCCTTTGCGGGCTACAGACTTTGATCCTGGAGCGGGCGGGCATCA
CTCCGTGGCAGTTGACCATGCTTGTGAAGAAAAACCCCAAGCTGACTGTT
CTCAAACTGAGAACATGTCGCGGTGTGCAGCCCGAGTTTCTAAACTGGCT
AGGTGGAGTGTACTACGAGCCAGAAGAGCTAGGGAGCGATGAGGACAGTC
TAGCTCCTGGTCGGAATCTGAAAGTGCTGTGGTTGGAAAATTGCCACCAG
ATACTTGCCCATCCCATCGAAAACTATGAACACCTGCCCGACGAAATCTG
CGACTTTGGTCTTGGATGGGTTAGAGGTCTGACTAGCTTGCGTGTAAGTG
GAATCTTGTCCCGTGATGCCTGCATTCAACCAGCTGACAGAGTTATCTTG
ACAGTCTCTATCTTTCAGCGAGAGCGCGAATATCCCGCCCGAATACATTG
ACAGAGCTAATAGTGTGCTTTGGAAGATACCAGAAGTCATCTTGCCTTAT
TCGGGTCATGGGGACAAAGCCCCCATCGAAGTTGATCCTGGATTGTTGTA
G
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Coding sequence (CDS) from alignment at OGUI01000003.1:2320599..2321799-

>ATCC64974_18930-T1 ID=ATCC64974_18930-T1|Name=ATCC64974_18930-T1|organism=Aspergillus niger N402|type=CDS|length=2280bp|location=Sequence derived from alignment at OGUI01000003.1:2320599..2321799- (Aspergillus niger N402)
TCTCTATCTTTCAGCGAGAGCGCGAATATCCCGCCCGAATACATTGACAG
AGCTAATAGTGTGCTTTGGAAGATACCAGAAGTCATCTTGCCTTATTCGG
GTCATGGGGACAAAGCCCCCATCGAAGTTGATCCTGGATTGTTGTAGATG
TCCGACAAGATTAGCTTATTACCTCTGGAACTCATCCTTCACATACTCTC
CTACCTTCCCTTCGAGTCCTTGCTTGCCTTCGGCGAAACATCTCGCACCA
ACTATGAGTCCCATACCCTCTGTCTTGAGTGTCTACGACTAGGAGTTTTT
GAGAAGCGCATCCACTCTGTGATTTCCTTACTCCAGGCTGGCTGGACCAC
CCCGGATCAAATGGCACAGATTTCCAGTCACAACAAACAAGCGAACGACT
ACACAATATCCATCATCCAACCTGCTATGAGCCGGCTTGCAAGCGACCTG
GACAGCAAGCCTCTGCTAAAAATCAAAAGCTTGAAAAGACGGTGCCCAGC
ACTACTCGAAAAATCCCGGACATTGGAGCAGATGACTCGGGAGCAGAACA
GGGTCTTTGCCCAAGTGGTGAATCGGTATGGTCGAGGCCTTAGGAAACTG
GAGTTCATGGCGTATGATCTTGACAGCGAGGGTGCCATGGCTCTAGCTTC
TAAATGCCAGAATATATTGCATCATCTAGCATTGCGCTTCGAGCATCCAC
ATATTCGGGATGGCCCCATCAGACCCAGCACTTGGATGAATCCTGCCCCA
GGAAGTACGGCATGGAACATGTTCCTCGGTATAGGACGGTACCCACAATT
TGGCCTTTGCGGGCTACAGACTTTGATCCTGGAGCGGGCGGGCATCACTC
CGTGGCAGTTGACCATGCTTGTGAAGAAAAACCCCAAGCTGACTGTTCTC
AAACTGAGAACATGTCGCGGTGTGCAGCCCGAGTTTCTAAACTGGCTAGG
TGGAGTGTACTACGAGCCAGAAGAGCTAGGGAGCGATGAGGACAGTCTAG
CTCCTGGTCGGAATCTGAAAGTGCTGTGGTTGGAAAATTGCCACCAGATA
CTTGCCCATCCCATCGAAAACTATGAACACCTGCCCGACGAAATCTGCGA
CTTTGGTCTTGGATGGGTTAGAGGTCTGACTAGCTTGCGTTCTCTATCTT
TCAGCGAGAGCGCGAATATCCCGCCCGAATACATTGACAGAGCTAATAGT
GTGCTTTGGAAGATACCAGAAGTCATCTTGCCTTATTCGGGTCATGGGGA
CAAAGCCCCCATCGAAGTTGATCCTGGATTGTTGTAGATGTCCGACAAGA
TTAGCTTATTACCTCTGGAACTCATCCTTCACATACTCTCCTACCTTCCC
TTCGAGTCCTTGCTTGCCTTCGGCGAAACATCTCGCACCAACTATGAGTC
CCATACCCTCTGTCTTGAGTGTCTACGACTAGGAGTTTTTGAGAAGCGCA
TCCACTCTGTGATTTCCTTACTCCAGGCTGGCTGGACCACCCCGGATCAA
ATGGCACAGATTTCCAGTCACAACAAACAAGCGAACGACTACACAATATC
CATCATCCAACCTGCTATGAGCCGGCTTGCAAGCGACCTGGACAGCAAGC
CTCTGCTAAAAATCAAAAGCTTGAAAAGACGGTGCCCAGCACTACTCGAA
AAATCCCGGACATTGGAGCAGATGACTCGGGAGCAGAACAGGGTCTTTGC
CCAAGTGGTGAATCGGTATGGTCGAGGCCTTAGGAAACTGGAGTTCATGG
CGTATGATCTTGACAGCGAGGGTGCCATGGCTCTAGCTTCTAAATGCCAG
AATATATTGCATCATCTAGCATTGCGCTTCGAGCATCCACATATTCGGGA
TGGCCCCATCAGACCCAGCACTTGGATGAATCCTGCCCCAGGAAGTACGG
CATGGAACATGTTCCTCGGTATAGGACGGTACCCACAATTTGGCCTTTGC
GGGCTACAGACTTTGATCCTGGAGCGGGCGGGCATCACTCCGTGGCAGTT
GACCATGCTTGTGAAGAAAAACCCCAAGCTGACTGTTCTCAAACTGAGAA
CATGTCGCGGTGTGCAGCCCGAGTTTCTAAACTGGCTAGGTGGAGTGTAC
TACGAGCCAGAAGAGCTAGGGAGCGATGAGGACAGTCTAGCTCCTGGTCG
GAATCTGAAAGTGCTGTGGTTGGAAAATTGCCACCAGATACTTGCCCATC
CCATCGAAAACTATGAACACCTGCCCGACGAAATCTGCGACTTTGGTCTT
GGATGGGTTAGAGGTCTGACTAGCTTGCGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_18930ATCC64974_18930Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18930-T1ATCC64974_18930-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18930-T1.cdsATCC64974_18930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18930-T1.exon2ATCC64974_18930-T1.exon2Aspergillus niger N402exon
ATCC64974_18930-T1.exon1ATCC64974_18930-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2320599..2321799 -
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